RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 ZNF561-AS1K7EIQ3 104 aa8.08□□□□□ -1.12
DDX56-209ENST00000473924 LINC00242Q5T6M2 205 aa8.08□□□□□ -1.12
DDX56-209ENST00000473924 KRTAP17-1Q9BYP8 105 aa8.08□□□□□ -1.12
DDX56-209ENST00000473924 DNAH11Q96DT5 4516 aa8.08□□□□□ -1.12
DDX56-209ENST00000473924 PKHD1P08F94 4074 aa8.07□□□□□ -1.12
DDX56-209ENST00000473924 A0A096LNJ9 63 aa8.07□□□□□ -1.12
DDX56-209ENST00000473924 IGHV3OR16-9A0A0B4J2B5 98 aa8.07□□□□□ -1.12
DDX56-209ENST00000473924 ATP6V1G1O75348 118 aa8.07□□□□□ -1.12
DDX56-209ENST00000473924 HSBP1O75506 76 aa8.07□□□□□ -1.12
DDX56-209ENST00000473924 CNBPP62633 177 aaKnown RBP8.07□□□□□ -1.12
DDX56-209ENST00000473924 SEC11AP67812 179 aa8.07□□□□□ -1.12
DDX56-209ENST00000473924 CDK2AP2O75956 126 aa8.06□□□□□ -1.12
DDX56-209ENST00000473924 NDUFA6P56556 154 aa8.06□□□□□ -1.12
DDX56-209ENST00000473924 C9orf163Q8N9P6 203 aa8.06□□□□□ -1.12
DDX56-209ENST00000473924 GEMIN7Q9H840 131 aaKnown RBP8.06□□□□□ -1.12
DDX56-209ENST00000473924 ATP5LO75964 103 aa8.05□□□□□ -1.12
DDX56-209ENST00000473924 HERVK_113P63121 156 aa8.05□□□□□ -1.12
DDX56-209ENST00000473924 COX6A2Q02221 97 aa8.05□□□□□ -1.12
DDX56-209ENST00000473924 PMVKQ15126 192 aa8.05□□□□□ -1.12
DDX56-209ENST00000473924 LINC00526Q96FQ7 95 aa8.05□□□□□ -1.12
DDX56-209ENST00000473924 CST9LQ9H4G1 147 aa8.05□□□□□ -1.12
DDX56-209ENST00000473924 A0A087WZ39 114 aa8.04□□□□□ -1.12
DDX56-209ENST00000473924 A0A0J9YXV3 536 aa8.04□□□□□ -1.12
DDX56-209ENST00000473924 SLPIP03973 132 aa8.04□□□□□ -1.12
DDX56-209ENST00000473924 SPAG11BQ08648 103 aa8.04□□□□□ -1.12
DDX56-209ENST00000473924 PDZD11Q5EBL8 140 aa8.04□□□□□ -1.12
DDX56-209ENST00000473924 FAM19A3Q7Z5A8 133 aa8.04□□□□□ -1.12
DDX56-209ENST00000473924 OR10D4PQ8NGN7 298 aa8.04□□□□□ -1.12
DDX56-209ENST00000473924 ORAOV1Q8WV07 137 aa8.04□□□□□ -1.12
DDX56-209ENST00000473924 IGLV4-69A0A075B6H9 119 aa8.03□□□□□ -1.12
DDX56-209ENST00000473924 IGHV3-64A0A075B6Q5 118 aa8.03□□□□□ -1.12
DDX56-209ENST00000473924 SERF1AO75920 110 aa8.03□□□□□ -1.12
DDX56-209ENST00000473924 FAM19A2Q8N3H0 131 aa8.03□□□□□ -1.12
DDX56-209ENST00000473924 TINCRA0A1B0GVN0 87 aa8.02□□□□□ -1.13
DDX56-209ENST00000473924 SYCNQ0VAF6 134 aa8.02□□□□□ -1.13
DDX56-209ENST00000473924 CARD19Q96LW7 228 aa8.02□□□□□ -1.13
DDX56-209ENST00000473924 PACRGQ96M98 296 aaPredicted RBP8.02□□□□□ -1.13
DDX56-209ENST00000473924 CAMK2N2Q96S95 79 aa8.02□□□□□ -1.13
DDX56-209ENST00000473924 FAM30AQ9NZY2 134 aa8.02□□□□□ -1.13
DDX56-209ENST00000473924 HIST1H2BKO60814 126 aa8.01□□□□□ -1.13
DDX56-209ENST00000473924 HIST1H2BJP06899 126 aa8.01□□□□□ -1.13
DDX56-209ENST00000473924 HIST1H2BOP23527 126 aa8.01□□□□□ -1.13
DDX56-209ENST00000473924 HIST1H2BBP33778 126 aa8.01□□□□□ -1.13
DDX56-209ENST00000473924 HIST1H2BDP58876 126 aa8.01□□□□□ -1.13
DDX56-209ENST00000473924 HIST1H2BCP62807 126 aa8.01□□□□□ -1.13
DDX56-209ENST00000473924 HIST2H2BEQ16778 126 aa8.01□□□□□ -1.13
DDX56-209ENST00000473924 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.01□□□□□ -1.13
DDX56-209ENST00000473924 LINC01561Q8N1V8 128 aa8.01□□□□□ -1.13
DDX56-209ENST00000473924 LINC00469Q8N7U9 141 aa8.01□□□□□ -1.13
DDX56-209ENST00000473924 HIST1H2BHQ93079 126 aa8.01□□□□□ -1.13
DDX56-209ENST00000473924 C2orf48Q96LS8 159 aa8.01□□□□□ -1.13
DDX56-209ENST00000473924 HIST1H2BNQ99877 126 aa8.01□□□□□ -1.13
DDX56-209ENST00000473924 HIST1H2BMQ99879 126 aa8.01□□□□□ -1.13
DDX56-209ENST00000473924 CDKN2A-AS1Q9UH64 79 aa8.01□□□□□ -1.13
DDX56-209ENST00000473924 XGP55808 180 aa8□□□□□ -1.13
DDX56-209ENST00000473924 HAMPP81172 84 aa8□□□□□ -1.13
DDX56-209ENST00000473924 SDIM1Q6ZPB5 146 aa8□□□□□ -1.13
DDX56-209ENST00000473924 IFI27L1Q96BM0 104 aa8□□□□□ -1.13
DDX56-209ENST00000473924 DYNC1H1Q14204 4646 aaKnown RBP7.99□□□□□ -1.13
DDX56-209ENST00000473924 LEPROTL1O95214 131 aa7.99□□□□□ -1.13
DDX56-209ENST00000473924 PRSS2P07478 247 aa7.99□□□□□ -1.13
DDX56-209ENST00000473924 LINC00310P59036 64 aa7.99□□□□□ -1.13
DDX56-209ENST00000473924 Q6ZRU5 148 aa7.99□□□□□ -1.13
DDX56-209ENST00000473924 Q6ZSA8 131 aa7.99□□□□□ -1.13
DDX56-209ENST00000473924 CHAC1Q9BUX1 264 aa7.99□□□□□ -1.13
DDX56-209ENST00000473924 TOMM7Q9P0U1 55 aa7.99□□□□□ -1.13
DDX56-209ENST00000473924 PKIGQ9Y2B9 76 aa7.99□□□□□ -1.13
DDX56-209ENST00000473924 DNAH5Q8TE73 4624 aa7.99□□□□□ -1.13
DDX56-209ENST00000473924 F8WDY8 70 aa7.98□□□□□ -1.13
DDX56-209ENST00000473924 NDUFA1O15239 70 aa7.98□□□□□ -1.13
DDX56-209ENST00000473924 NUPR1O60356 82 aa7.98□□□□□ -1.13
DDX56-209ENST00000473924 DPH3Q96FX2 82 aa7.98□□□□□ -1.13
DDX56-209ENST00000473924 IGLV5-45A0A087WSX0 123 aa7.97□□□□□ -1.13
DDX56-209ENST00000473924 H3BRM9 83 aa7.97□□□□□ -1.13
DDX56-209ENST00000473924 IGLC3P0DOY3 106 aa7.97□□□□□ -1.13
DDX56-209ENST00000473924 FABP4P15090 132 aa7.97□□□□□ -1.13
DDX56-209ENST00000473924 C6orf226Q5I0X4 101 aa7.97□□□□□ -1.13
DDX56-209ENST00000473924 HSPB8Q9UJY1 196 aa7.97□□□□□ -1.13
DDX56-209ENST00000473924 CHTOPQ9Y3Y2 248 aaKnown RBP7.97□□□□□ -1.13
DDX56-209ENST00000473924 LRP1BQ9NZR2 4599 aa7.97□□□□□ -1.13
DDX56-209ENST00000473924 H0Y8G0 127 aa7.96□□□□□ -1.14
DDX56-209ENST00000473924 CKS1BP61024 79 aa7.96□□□□□ -1.14
DDX56-209ENST00000473924 KIAA0087Q14695 138 aa7.96□□□□□ -1.14
DDX56-209ENST00000473924 SCXQ7RTU7 201 aa7.96□□□□□ -1.14
DDX56-209ENST00000473924 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.96□□□□□ -1.14
DDX56-209ENST00000473924 TRAV12-1A0A0B4J245 112 aa7.95□□□□□ -1.14
DDX56-209ENST00000473924 IGKV2-24A0A0C4DH68 120 aa7.95□□□□□ -1.14
DDX56-209ENST00000473924 SMIM1B2RUZ4 78 aa7.95□□□□□ -1.14
DDX56-209ENST00000473924 SPINK8P0C7L1 97 aa7.95□□□□□ -1.14
DDX56-209ENST00000473924 CHTF8P0CG12 524 aa7.95□□□□□ -1.14
DDX56-209ENST00000473924 UNQ6190/PRO20217Q6UXQ8 127 aa7.95□□□□□ -1.14
DDX56-209ENST00000473924 Q8IZM0 81 aa7.95□□□□□ -1.14
DDX56-209ENST00000473924 MRPL35Q9NZE8 188 aaKnown RBP7.95□□□□□ -1.14
DDX56-209ENST00000473924 KIAA1109Q2LD37 5005 aa7.94□□□□□ -1.14
DDX56-209ENST00000473924 LOC107984640A0A0U1RRK4 108 aa7.94□□□□□ -1.14
DDX56-209ENST00000473924 SMR3BP02814 79 aaPredicted RBP7.94□□□□□ -1.14
DDX56-209ENST00000473924 ZNF22P17026 224 aaPredicted RBP7.94□□□□□ -1.14
DDX56-209ENST00000473924 RNF151Q2KHN1 245 aa7.94□□□□□ -1.14
DDX56-209ENST00000473924 TMEM170BQ5T4T1 132 aa7.94□□□□□ -1.14
DDX56-209ENST00000473924 C2orf82Q6UX34 121 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms