RNA–Protein interactions for RNA: ENST00000473270.1

APTX-218, Transcript of aprataxin, humanhuman

TSL 2

Gene APTX, Length 645 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-218ENST00000473270 SS18Q15532 418 aa12.75□□□□□ -0.37
APTX-218ENST00000473270 ERASQ7Z444 233 aa12.75□□□□□ -0.37
APTX-218ENST00000473270 TMEM141Q96I45 108 aa12.75□□□□□ -0.37
APTX-218ENST00000473270 TIMM17AQ99595 171 aa12.75□□□□□ -0.37
APTX-218ENST00000473270 IGLV4-3A0A075B6K6 122 aa12.74□□□□□ -0.37
APTX-218ENST00000473270 IGIPA6NJ69 53 aa12.74□□□□□ -0.37
APTX-218ENST00000473270 CCL25O15444 150 aa12.74□□□□□ -0.37
APTX-218ENST00000473270 HIST1H2BKO60814 126 aa12.74□□□□□ -0.37
APTX-218ENST00000473270 HIST1H2BJP06899 126 aa12.74□□□□□ -0.37
APTX-218ENST00000473270 HIST1H2BOP23527 126 aa12.74□□□□□ -0.37
APTX-218ENST00000473270 HIST1H2BBP33778 126 aa12.74□□□□□ -0.37
APTX-218ENST00000473270 HIST1H2BDP58876 126 aa12.74□□□□□ -0.37
APTX-218ENST00000473270 HIST1H2BCP62807 126 aa12.74□□□□□ -0.37
APTX-218ENST00000473270 HIST2H2BEQ16778 126 aa12.74□□□□□ -0.37
APTX-218ENST00000473270 RNASE13Q5GAN3 156 aaKnown RBP12.74□□□□□ -0.37
APTX-218ENST00000473270 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.74□□□□□ -0.37
APTX-218ENST00000473270 HIST1H2BHQ93079 126 aa12.74□□□□□ -0.37
APTX-218ENST00000473270 HIST1H2BNQ99877 126 aa12.74□□□□□ -0.37
APTX-218ENST00000473270 HIST1H2BMQ99879 126 aa12.74□□□□□ -0.37
APTX-218ENST00000473270 OPRPNQ99935 248 aaPredicted RBP12.74□□□□□ -0.37
APTX-218ENST00000473270 IGLV10-54A0A075B6I4 117 aa12.73□□□□□ -0.37
APTX-218ENST00000473270 TEX43Q6ZNM6 134 aa12.73□□□□□ -0.37
APTX-218ENST00000473270 CIRBP-AS1Q8TBR5 109 aa12.73□□□□□ -0.37
APTX-218ENST00000473270 C2orf88Q9BSF0 95 aa12.73□□□□□ -0.37
APTX-218ENST00000473270 VCX2Q9H322 139 aa12.73□□□□□ -0.37
APTX-218ENST00000473270 LINC00959A0A1B0GUT2 108 aa12.72□□□□□ -0.37
APTX-218ENST00000473270 SERF1AO75920 110 aa12.72□□□□□ -0.37
APTX-218ENST00000473270 PMCHL1Q16048 86 aa12.72□□□□□ -0.37
APTX-218ENST00000473270 TRAV13-1A0A0B4J241 112 aa12.71□□□□□ -0.37
APTX-218ENST00000473270 IFITM10A6NMD0 228 aa12.71□□□□□ -0.37
APTX-218ENST00000473270 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.7□□□□□ -0.38
APTX-218ENST00000473270 CHCHD10Q8WYQ3 142 aaPredicted RBP12.7□□□□□ -0.38
APTX-218ENST00000473270 A0A096LNJ9 63 aa12.69□□□□□ -0.38
APTX-218ENST00000473270 ATP5LO75964 103 aa12.69□□□□□ -0.38
APTX-218ENST00000473270 RPL37AP61513 92 aaKnown RBP12.69□□□□□ -0.38
APTX-218ENST00000473270 FAM104AQ969W3 186 aa12.69□□□□□ -0.38
APTX-218ENST00000473270 DNAH8Q96JB1 4490 aa12.68□□□□□ -0.38
APTX-218ENST00000473270 GAGE12HA6NDE8 117 aa12.68□□□□□ -0.38
APTX-218ENST00000473270 PDZD11Q5EBL8 140 aa12.68□□□□□ -0.38
APTX-218ENST00000473270 AMELXQ99217 191 aa12.68□□□□□ -0.38
APTX-218ENST00000473270 XCL1P47992 114 aa12.67□□□□□ -0.38
APTX-218ENST00000473270 FAM19A2Q8N3H0 131 aa12.67□□□□□ -0.38
APTX-218ENST00000473270 PLA2G2DQ9UNK4 145 aa12.67□□□□□ -0.38
APTX-218ENST00000473270 USP17L23D6RBM5 183 aa12.66□□□□□ -0.38
APTX-218ENST00000473270 KRTAP26-1Q6PEX3 210 aa12.66□□□□□ -0.38
APTX-218ENST00000473270 NDUFA6P56556 154 aa12.65□□□□□ -0.38
APTX-218ENST00000473270 LINC00310P59036 64 aa12.65□□□□□ -0.38
APTX-218ENST00000473270 CD164L2Q6UWJ8 174 aa12.65□□□□□ -0.38
APTX-218ENST00000473270 SEC11AP67812 179 aa12.64□□□□□ -0.39
APTX-218ENST00000473270 PMVKQ15126 192 aa12.64□□□□□ -0.39
APTX-218ENST00000473270 LINC00173Q6ZV60 143 aa12.64□□□□□ -0.39
APTX-218ENST00000473270 NUPR1O60356 82 aa12.63□□□□□ -0.39
APTX-218ENST00000473270 LEPROTL1O95214 131 aa12.63□□□□□ -0.39
APTX-218ENST00000473270 UBE2D1P51668 147 aa12.63□□□□□ -0.39
APTX-218ENST00000473270 ZC2HC1BQ5TFG8 222 aa12.63□□□□□ -0.39
APTX-218ENST00000473270 CFAP161Q6P656 301 aa12.63□□□□□ -0.39
APTX-218ENST00000473270 FOXI1Q12951 378 aa12.62□□□□□ -0.39
APTX-218ENST00000473270 COA6Q5JTJ3 125 aaKnown RBP12.62□□□□□ -0.39
APTX-218ENST00000473270 IFI27L1Q96BM0 104 aa12.62□□□□□ -0.39
APTX-218ENST00000473270 DPH3Q96FX2 82 aa12.62□□□□□ -0.39
APTX-218ENST00000473270 HSPB8Q9UJY1 196 aa12.62□□□□□ -0.39
APTX-218ENST00000473270 COX7A2LO14548 114 aa12.61□□□□□ -0.39
APTX-218ENST00000473270 PRSS1P07477 247 aa12.61□□□□□ -0.39
APTX-218ENST00000473270 CST9LQ9H4G1 147 aa12.61□□□□□ -0.39
APTX-218ENST00000473270 MALP21145 153 aa12.6□□□□□ -0.39
APTX-218ENST00000473270 LINC00242Q5T6M2 205 aa12.6□□□□□ -0.39
APTX-218ENST00000473270 FAM19A3Q7Z5A8 133 aa12.59□□□□□ -0.39
APTX-218ENST00000473270 GEMIN7Q9H840 131 aaKnown RBP12.59□□□□□ -0.39
APTX-218ENST00000473270 S100A6P06703 90 aa12.58□□□□□ -0.4
APTX-218ENST00000473270 FABP4P15090 132 aa12.58□□□□□ -0.4
APTX-218ENST00000473270 KRTAP10-4P60372 401 aaPredicted RBP12.58□□□□□ -0.4
APTX-218ENST00000473270 HERVK_113P63121 156 aa12.58□□□□□ -0.4
APTX-218ENST00000473270 C9orf163Q8N9P6 203 aa12.58□□□□□ -0.4
APTX-218ENST00000473270 IGHV1-58A0A0C4DH39 117 aa12.57□□□□□ -0.4
APTX-218ENST00000473270 APOMO95445 188 aa12.57□□□□□ -0.4
APTX-218ENST00000473270 C5orf38Q86SI9 138 aa12.57□□□□□ -0.4
APTX-218ENST00000473270 PACRGQ96M98 296 aaPredicted RBP12.57□□□□□ -0.4
APTX-218ENST00000473270 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.56□□□□□ -0.4
APTX-218ENST00000473270 IGHV3OR16-9A0A0B4J2B5 98 aa12.56□□□□□ -0.4
APTX-218ENST00000473270 A0A0J9YXV3 536 aa12.56□□□□□ -0.4
APTX-218ENST00000473270 TRAV12-1A0A0B4J245 112 aa12.55□□□□□ -0.4
APTX-218ENST00000473270 TINCRA0A1B0GVN0 87 aa12.55□□□□□ -0.4
APTX-218ENST00000473270 hDV102S1A0JD36 115 aa12.55□□□□□ -0.4
APTX-218ENST00000473270 COX6A2Q02221 97 aa12.55□□□□□ -0.4
APTX-218ENST00000473270 MAP1LC3CQ9BXW4 147 aa12.54□□□□□ -0.4
APTX-218ENST00000473270 CHTOPQ9Y3Y2 248 aaKnown RBP12.54□□□□□ -0.4
APTX-218ENST00000473270 A0A087WZ39 114 aa12.53□□□□□ -0.4
APTX-218ENST00000473270 LINC01561Q8N1V8 128 aa12.53□□□□□ -0.4
APTX-218ENST00000473270 IGHV3-64A0A075B6Q5 118 aa12.52□□□□□ -0.41
APTX-218ENST00000473270 H0Y8G0 127 aa12.52□□□□□ -0.41
APTX-218ENST00000473270 IGLC3P0DOY3 106 aa12.52□□□□□ -0.41
APTX-218ENST00000473270 LCE2DQ5TA82 110 aaPredicted RBP12.52□□□□□ -0.41
APTX-218ENST00000473270 LINC00469Q8N7U9 141 aa12.52□□□□□ -0.41
APTX-218ENST00000473270 C15orf56Q8N910 161 aa12.52□□□□□ -0.41
APTX-218ENST00000473270 GVQW2A0A096LPI5 108 aaPredicted RBP12.51□□□□□ -0.41
APTX-218ENST00000473270 ZNF561-AS1K7EIQ3 104 aa12.51□□□□□ -0.41
APTX-218ENST00000473270 H3BRM9 83 aa12.5□□□□□ -0.41
APTX-218ENST00000473270 S100A2P29034 98 aa12.5□□□□□ -0.41
APTX-218ENST00000473270 HIGD2BQ4VC39 106 aa12.5□□□□□ -0.41
APTX-218ENST00000473270 Q6ZRU5 148 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms