RNA–Protein interactions for RNA: ENST00000472045.1

IRF1-208, Transcript of interferon regulatory factor 1, humanhuman

TSL 2

Gene IRF1, Length 5,153 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-208ENST00000472045 RNASE8Q8TDE3 154 aaKnown RBP8.85□□□□□ -0.99
IRF1-208ENST00000472045 A0A096LNI7 61 aa8.85□□□□□ -0.99
IRF1-208ENST00000472045 NRACQ8N912 160 aa8.85□□□□□ -0.99
IRF1-208ENST00000472045 LINC00474Q9P2X8 69 aa8.85□□□□□ -0.99
IRF1-208ENST00000472045 UBE2D4Q9Y2X8 147 aa8.85□□□□□ -0.99
IRF1-208ENST00000472045 FXYD2P54710 66 aa8.85□□□□□ -0.99
IRF1-208ENST00000472045 SPANXDQ9BXN6 97 aa8.85□□□□□ -0.99
IRF1-208ENST00000472045 UBE2D1P51668 147 aa8.84□□□□□ -0.99
IRF1-208ENST00000472045 NREPQ16612 68 aa8.84□□□□□ -0.99
IRF1-208ENST00000472045 POLR2KP53803 58 aaKnown RBP8.84□□□□□ -0.99
IRF1-208ENST00000472045 MRPS36P82909 103 aaKnown RBP8.84□□□□□ -1
IRF1-208ENST00000472045 FHL2Q14192 279 aa8.84□□□□□ -1
IRF1-208ENST00000472045 CITED1Q99966 193 aa8.83□□□□□ -1
IRF1-208ENST00000472045 C1orf134Q5TEV5 83 aa8.83□□□□□ -1
IRF1-208ENST00000472045 DSCAML1Q8TD84 2053 aa8.83□□□□□ -1
IRF1-208ENST00000472045 BEAN1Q3B7T3 259 aa8.83□□□□□ -1
IRF1-208ENST00000472045 SPANXB1Q9NS25 103 aaPredicted RBP8.83□□□□□ -1
IRF1-208ENST00000472045 JMJD7-PLA2G4BH0Y9G9 81 aa8.82□□□□□ -1
IRF1-208ENST00000472045 NPSP0C0P6 89 aa8.82□□□□□ -1
IRF1-208ENST00000472045 UNC80Q8N2C7 3258 aa8.82□□□□□ -1
IRF1-208ENST00000472045 ANKRD17O75179 2603 aaKnown RBP8.82□□□□□ -1
IRF1-208ENST00000472045 LINC01620Q4KN68 170 aa8.82□□□□□ -1
IRF1-208ENST00000472045 CLEC2BQ92478 149 aa8.82□□□□□ -1
IRF1-208ENST00000472045 IGLV5-52A0A0A0MRZ9 124 aa8.81□□□□□ -1
IRF1-208ENST00000472045 TMEM256-PLSCR3K7ERE1 68 aa8.81□□□□□ -1
IRF1-208ENST00000472045 K7EP13 123 aa8.81□□□□□ -1
IRF1-208ENST00000472045 RBM3P98179 157 aaKnown RBP8.81□□□□□ -1
IRF1-208ENST00000472045 IGKV2-28A0A075B6P5 120 aa8.81□□□□□ -1
IRF1-208ENST00000472045 IGKV2D-28P01615 120 aa8.81□□□□□ -1
IRF1-208ENST00000472045 F8P00451 2351 aa8.8□□□□□ -1
IRF1-208ENST00000472045 CDPF1Q6NVV7 123 aa8.8□□□□□ -1
IRF1-208ENST00000472045 CNFNQ9BYD5 112 aa8.8□□□□□ -1
IRF1-208ENST00000472045 CDC42SE2Q9NRR3 84 aa8.8□□□□□ -1
IRF1-208ENST00000472045 ZNF706Q9Y5V0 76 aaPredicted RBP8.79□□□□□ -1
IRF1-208ENST00000472045 TRANK1O15050 2925 aa8.79□□□□□ -1
IRF1-208ENST00000472045 H0Y9J4 135 aa8.79□□□□□ -1
IRF1-208ENST00000472045 LINC00308Q8TCZ7 52 aa8.79□□□□□ -1
IRF1-208ENST00000472045 FSHBP01225 129 aa8.78□□□□□ -1
IRF1-208ENST00000472045 M0R378 163 aa8.78□□□□□ -1
IRF1-208ENST00000472045 A8MZ25 164 aa8.77□□□□□ -1
IRF1-208ENST00000472045 GAS8-AS1O95177 125 aa8.77□□□□□ -1.01
IRF1-208ENST00000472045 TRAV23DV6A0A075B6W5 121 aa8.77□□□□□ -1.01
IRF1-208ENST00000472045 CYSRT1A8MQ03 144 aa8.77□□□□□ -1.01
IRF1-208ENST00000472045 ACYP1P07311 99 aa8.76□□□□□ -1.01
IRF1-208ENST00000472045 LYPD5Q6UWN5 251 aa8.76□□□□□ -1.01
IRF1-208ENST00000472045 Q8IZM0 81 aa8.76□□□□□ -1.01
IRF1-208ENST00000472045 PDE6GP18545 87 aa8.76□□□□□ -1.01
IRF1-208ENST00000472045 PLAC8L1A1L4L8 177 aa8.76□□□□□ -1.01
IRF1-208ENST00000472045 USP17L23D6RBM5 183 aa8.76□□□□□ -1.01
IRF1-208ENST00000472045 PCSK5Q92824 1860 aa8.76□□□□□ -1.01
IRF1-208ENST00000472045 A0A0B4J2C4 111 aa8.75□□□□□ -1.01
IRF1-208ENST00000472045 WFDC10BQ8IUB3 73 aa8.75□□□□□ -1.01
IRF1-208ENST00000472045 PPDPFQ9H3Y8 114 aa8.75□□□□□ -1.01
IRF1-208ENST00000472045 RPL37AP8A6NKH3 93 aa8.75□□□□□ -1.01
IRF1-208ENST00000472045 TET2Q6N021 2002 aaPredicted RBP8.75□□□□□ -1.01
IRF1-208ENST00000472045 FOXI1Q12951 378 aa8.74□□□□□ -1.01
IRF1-208ENST00000472045 C6orf99Q4VX62 202 aa8.74□□□□□ -1.01
IRF1-208ENST00000472045 IGKV2D-26A0A0A0MRZ7 120 aa8.74□□□□□ -1.01
IRF1-208ENST00000472045 CELA1Q9UNI1 258 aa8.74□□□□□ -1.01
IRF1-208ENST00000472045 TRBV10-2A0A0K0K1G8 114 aa8.73□□□□□ -1.01
IRF1-208ENST00000472045 COX17Q14061 63 aa8.73□□□□□ -1.01
IRF1-208ENST00000472045 SBSPONQ8IVN8 264 aa8.73□□□□□ -1.01
IRF1-208ENST00000472045 IGLV4-60A0A075B6I1 120 aa8.73□□□□□ -1.01
IRF1-208ENST00000472045 EGFEM1PQ0D2K5 195 aa8.73□□□□□ -1.01
IRF1-208ENST00000472045 H3BT86 120 aa8.73□□□□□ -1.01
IRF1-208ENST00000472045 MDFIQ99750 246 aa8.72□□□□□ -1.01
IRF1-208ENST00000472045 CDH23Q9H251 3354 aa8.72□□□□□ -1.01
IRF1-208ENST00000472045 TRBV30A0A0K0K1B3 111 aa8.72□□□□□ -1.01
IRF1-208ENST00000472045 MUC7Q8TAX7 377 aa8.72□□□□□ -1.01
IRF1-208ENST00000472045 PTH2Q96A98 100 aa8.72□□□□□ -1.01
IRF1-208ENST00000472045 UNQ6190/PRO20217Q6UXQ8 127 aa8.72□□□□□ -1.01
IRF1-208ENST00000472045 COX8CQ7Z4L0 72 aa8.72□□□□□ -1.01
IRF1-208ENST00000472045 DHRS4-AS1Q9P1J3 65 aa8.72□□□□□ -1.01
IRF1-208ENST00000472045 M0QXV9 152 aa8.72□□□□□ -1.01
IRF1-208ENST00000472045 TRIOO75962 3097 aa8.71□□□□□ -1.01
IRF1-208ENST00000472045 TIMM17BO60830 172 aa8.71□□□□□ -1.01
IRF1-208ENST00000472045 LINC00242Q5T6M2 205 aa8.71□□□□□ -1.01
IRF1-208ENST00000472045 A0A1B0GX51 115 aa8.71□□□□□ -1.01
IRF1-208ENST00000472045 C6orf223Q8N319 242 aa8.71□□□□□ -1.02
IRF1-208ENST00000472045 LINC00694P0DN24 101 aa8.7□□□□□ -1.02
IRF1-208ENST00000472045 XIRP2A4UGR9 3374 aa8.7□□□□□ -1.02
IRF1-208ENST00000472045 Q6ZSN1 163 aa8.7□□□□□ -1.02
IRF1-208ENST00000472045 MP68P56378 58 aa8.7□□□□□ -1.02
IRF1-208ENST00000472045 RPL28P46779 137 aaKnown RBP8.69□□□□□ -1.02
IRF1-208ENST00000472045 CENPEQ02224 2701 aa8.69□□□□□ -1.02
IRF1-208ENST00000472045 MAPKAPK5-AS1Q8N8E1 139 aa8.69□□□□□ -1.02
IRF1-208ENST00000472045 IGKV3D-7A0A0C4DH55 119 aa8.69□□□□□ -1.02
IRF1-208ENST00000472045 IGIPA6NJ69 53 aa8.69□□□□□ -1.02
IRF1-208ENST00000472045 TEN1Q86WV5 123 aa8.69□□□□□ -1.02
IRF1-208ENST00000472045 C14orf132Q9NPU4 83 aa8.69□□□□□ -1.02
IRF1-208ENST00000472045 POM121L12Q8N7R1 296 aa8.68□□□□□ -1.02
IRF1-208ENST00000472045 SLPIP03973 132 aa8.68□□□□□ -1.02
IRF1-208ENST00000472045 A0A1B0GUV1 79 aa8.67□□□□□ -1.02
IRF1-208ENST00000472045 ZNF292O60281 2723 aa8.67□□□□□ -1.02
IRF1-208ENST00000472045 CSDC2Q9Y534 153 aaKnown RBP8.67□□□□□ -1.02
IRF1-208ENST00000472045 ZNF73O43830 326 aaPredicted RBP8.67□□□□□ -1.02
IRF1-208ENST00000472045 C11orf72Q8NBR9 251 aa8.67□□□□□ -1.02
IRF1-208ENST00000472045 IGLV9-49A0A0B4J1Y8 123 aa8.66□□□□□ -1.02
IRF1-208ENST00000472045 BPY2O14599 106 aa8.66□□□□□ -1.02
IRF1-208ENST00000472045 WFDC9Q8NEX5 89 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms