RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 OR10D4PQ8NGN7 298 aa7.39□□□□□ -1.23
HDAC3-204ENST00000469207 DIRC1Q969H9 104 aa7.39□□□□□ -1.23
HDAC3-204ENST00000469207 C9JQL5 133 aa7.38□□□□□ -1.23
HDAC3-204ENST00000469207 NDUFA1O15239 70 aa7.38□□□□□ -1.23
HDAC3-204ENST00000469207 TNFRSF6BO95407 300 aa7.38□□□□□ -1.23
HDAC3-204ENST00000469207 PPP1R17O96001 155 aa7.38□□□□□ -1.23
HDAC3-204ENST00000469207 KRTAP1-4P0C5Y4 121 aa7.38□□□□□ -1.23
HDAC3-204ENST00000469207 CKS2P33552 79 aa7.38□□□□□ -1.23
HDAC3-204ENST00000469207 RPL23P62829 140 aaKnown RBP7.38□□□□□ -1.23
HDAC3-204ENST00000469207 SMAGPQ0VAQ4 97 aa7.38□□□□□ -1.23
HDAC3-204ENST00000469207 TMEM18Q96B42 140 aa7.38□□□□□ -1.23
HDAC3-204ENST00000469207 IMMP2LQ96T52 175 aa7.38□□□□□ -1.23
HDAC3-204ENST00000469207 NAT8BQ9UHF3 227 aa7.38□□□□□ -1.23
HDAC3-204ENST00000469207 TRBV24-1A0A075B6N3 115 aa7.37□□□□□ -1.23
HDAC3-204ENST00000469207 PPP1R2P9O14990 202 aa7.37□□□□□ -1.23
HDAC3-204ENST00000469207 KIAA0087Q14695 138 aa7.37□□□□□ -1.23
HDAC3-204ENST00000469207 TMEM241Q24JQ0 296 aa7.37□□□□□ -1.23
HDAC3-204ENST00000469207 FAM74A3Q4VXF1 159 aa7.37□□□□□ -1.23
HDAC3-204ENST00000469207 C20orf78Q9BR46 151 aa7.37□□□□□ -1.23
HDAC3-204ENST00000469207 hCG_2014768A0A024R1R8 64 aa7.36□□□□□ -1.23
HDAC3-204ENST00000469207 SMIM27A0A1W2PRY6 76 aa7.36□□□□□ -1.23
HDAC3-204ENST00000469207 LINC00862A6NCI5 91 aa7.36□□□□□ -1.23
HDAC3-204ENST00000469207 D6R8Y8 96 aa7.36□□□□□ -1.23
HDAC3-204ENST00000469207 NPYP01303 97 aa7.36□□□□□ -1.23
HDAC3-204ENST00000469207 TLX1NBP0CAT3 122 aa7.36□□□□□ -1.23
HDAC3-204ENST00000469207 ADIRFQ15847 76 aa7.36□□□□□ -1.23
HDAC3-204ENST00000469207 C2orf82Q6UX34 121 aa7.36□□□□□ -1.23
HDAC3-204ENST00000469207 IFITM10A6NMD0 228 aa7.35□□□□□ -1.23
HDAC3-204ENST00000469207 SRSF3P84103 164 aaKnown RBP7.35□□□□□ -1.23
HDAC3-204ENST00000469207 ZC2HC1BQ5TFG8 222 aa7.35□□□□□ -1.23
HDAC3-204ENST00000469207 MRPL54Q6P161 138 aaKnown RBP7.35□□□□□ -1.23
HDAC3-204ENST00000469207 SMIM2Q9BVW6 85 aa7.35□□□□□ -1.23
HDAC3-204ENST00000469207 SMDT1Q9H4I9 107 aa7.35□□□□□ -1.23
HDAC3-204ENST00000469207 RPL32P62910 135 aaKnown RBP7.34□□□□□ -1.23
HDAC3-204ENST00000469207 UBE2BP63146 152 aa7.34□□□□□ -1.23
HDAC3-204ENST00000469207 HBBP68871 147 aa7.34□□□□□ -1.23
HDAC3-204ENST00000469207 MRPS36P82909 103 aaKnown RBP7.34□□□□□ -1.23
HDAC3-204ENST00000469207 PRR4Q16378 134 aa7.34□□□□□ -1.23
HDAC3-204ENST00000469207 C9orf129Q5T035 196 aaKnown RBP7.34□□□□□ -1.23
HDAC3-204ENST00000469207 AKAP14Q86UN6 197 aa7.34□□□□□ -1.23
HDAC3-204ENST00000469207 SPANXA1Q9NS26 97 aa7.34□□□□□ -1.23
HDAC3-204ENST00000469207 F8WDY8 70 aa7.33□□□□□ -1.24
HDAC3-204ENST00000469207 M0QXV9 152 aa7.33□□□□□ -1.24
HDAC3-204ENST00000469207 LINC00242Q5T6M2 205 aa7.33□□□□□ -1.24
HDAC3-204ENST00000469207 IGLV1-50A0A075B6I6 118 aa7.32□□□□□ -1.24
HDAC3-204ENST00000469207 NAT8Q9UHE5 227 aa7.32□□□□□ -1.24
HDAC3-204ENST00000469207 IGLV4-3A0A075B6K6 122 aa7.31□□□□□ -1.24
HDAC3-204ENST00000469207 TGIF2-C20orf24A0A0A6YYL0 155 aa7.31□□□□□ -1.24
HDAC3-204ENST00000469207 LINC00469Q8N7U9 141 aa7.31□□□□□ -1.24
HDAC3-204ENST00000469207 LOC389332A0A1B0GUA5 103 aa7.3□□□□□ -1.24
HDAC3-204ENST00000469207 A0A1B0GXF2 115 aa7.3□□□□□ -1.24
HDAC3-204ENST00000469207 TSPAN13O95857 204 aa7.3□□□□□ -1.24
HDAC3-204ENST00000469207 UBE2D1P51668 147 aa7.3□□□□□ -1.24
HDAC3-204ENST00000469207 A0A1B0GW15 77 aa7.29□□□□□ -1.24
HDAC3-204ENST00000469207 NDUFC2-KCTD14E9PQ53 114 aa7.29□□□□□ -1.24
HDAC3-204ENST00000469207 IFI27P40305 119 aaPredicted RBP7.29□□□□□ -1.24
HDAC3-204ENST00000469207 TMEM136Q6ZRR5 245 aa7.29□□□□□ -1.24
HDAC3-204ENST00000469207 TRBV30A0A0K0K1B3 111 aa7.28□□□□□ -1.24
HDAC3-204ENST00000469207 F8W036 122 aa7.28□□□□□ -1.24
HDAC3-204ENST00000469207 RAB5AP20339 215 aa7.28□□□□□ -1.24
HDAC3-204ENST00000469207 PACRGQ96M98 296 aaPredicted RBP7.28□□□□□ -1.24
HDAC3-204ENST00000469207 PRELID3AQ96N28 172 aa7.28□□□□□ -1.24
HDAC3-204ENST00000469207 TOMM7Q9P0U1 55 aa7.28□□□□□ -1.24
HDAC3-204ENST00000469207 PYGO1Q9Y3Y4 419 aa7.28□□□□□ -1.24
HDAC3-204ENST00000469207 C22orf24Q9Y442 160 aa7.28□□□□□ -1.24
HDAC3-204ENST00000469207 ZNF861PO60384 105 aa7.27□□□□□ -1.25
HDAC3-204ENST00000469207 LINC00173Q6ZV60 143 aa7.27□□□□□ -1.25
HDAC3-204ENST00000469207 ORMDL3Q8N138 153 aa7.27□□□□□ -1.25
HDAC3-204ENST00000469207 TMEM141Q96I45 108 aa7.27□□□□□ -1.25
HDAC3-204ENST00000469207 XAGE1AQ9HD64 81 aa7.27□□□□□ -1.25
HDAC3-204ENST00000469207 PPBPP02775 128 aa7.26□□□□□ -1.25
HDAC3-204ENST00000469207 TEX43Q6ZNM6 134 aa7.26□□□□□ -1.25
HDAC3-204ENST00000469207 A0A087X002 238 aa7.25□□□□□ -1.25
HDAC3-204ENST00000469207 RPL13AP40429 203 aaKnown RBP7.25□□□□□ -1.25
HDAC3-204ENST00000469207 CTDSP1Q9GZU7 261 aa7.25□□□□□ -1.25
HDAC3-204ENST00000469207 ANAPC11Q9NYG5 84 aa7.25□□□□□ -1.25
HDAC3-204ENST00000469207 S100A8P05109 93 aa7.24□□□□□ -1.25
HDAC3-204ENST00000469207 PEA15Q15121 130 aa7.24□□□□□ -1.25
HDAC3-204ENST00000469207 C6orf226Q5I0X4 101 aa7.24□□□□□ -1.25
HDAC3-204ENST00000469207 AMELXQ99217 191 aa7.24□□□□□ -1.25
HDAC3-204ENST00000469207 CARHSP1Q9Y2V2 147 aaKnown RBP7.24□□□□□ -1.25
HDAC3-204ENST00000469207 FAT4Q6V0I7 4981 aa7.23□□□□□ -1.25
HDAC3-204ENST00000469207 PRSS47A8MTI9 375 aa7.23□□□□□ -1.25
HDAC3-204ENST00000469207 PRSS2P07478 247 aa7.23□□□□□ -1.25
HDAC3-204ENST00000469207 CKS1BP61024 79 aa7.23□□□□□ -1.25
HDAC3-204ENST00000469207 C2orf66Q6UXQ4 117 aa7.23□□□□□ -1.25
HDAC3-204ENST00000469207 Q6ZN92 141 aa7.23□□□□□ -1.25
HDAC3-204ENST00000469207 KRTAP9-2Q9BYQ4 174 aa7.23□□□□□ -1.25
HDAC3-204ENST00000469207 VCX2Q9H322 139 aa7.23□□□□□ -1.25
HDAC3-204ENST00000469207 A0A1B0GVG6 124 aa7.22□□□□□ -1.25
HDAC3-204ENST00000469207 LINC01561Q8N1V8 128 aa7.22□□□□□ -1.25
HDAC3-204ENST00000469207 ALKBH7Q9BT30 221 aaPredicted RBP7.22□□□□□ -1.25
HDAC3-204ENST00000469207 CDKN2A-AS1Q9UH64 79 aa7.22□□□□□ -1.25
HDAC3-204ENST00000469207 IGIPA6NJ69 53 aa7.21□□□□□ -1.26
HDAC3-204ENST00000469207 RPL37AP8A6NKH3 93 aa7.21□□□□□ -1.26
HDAC3-204ENST00000469207 Q8N8P6 123 aa7.21□□□□□ -1.26
HDAC3-204ENST00000469207 C2orf88Q9BSF0 95 aa7.21□□□□□ -1.26
HDAC3-204ENST00000469207 MAP1LC3AQ9H492 121 aa7.21□□□□□ -1.26
HDAC3-204ENST00000469207 CYSLTR1Q9Y271 337 aa7.21□□□□□ -1.26
HDAC3-204ENST00000469207 MUC17Q685J3 4493 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms