RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 ZNF861PO60384 105 aa7.16□□□□□ -1.26
UBR4-211ENST00000467272 SUMO2P61956 95 aaKnown RBP7.16□□□□□ -1.26
UBR4-211ENST00000467272 A0A087X002 238 aa7.15□□□□□ -1.26
UBR4-211ENST00000467272 HIGD1CA8MV81 97 aa7.15□□□□□ -1.26
UBR4-211ENST00000467272 TMEM250H0YL14 139 aa7.15□□□□□ -1.26
UBR4-211ENST00000467272 RPL32P62910 135 aaKnown RBP7.15□□□□□ -1.26
UBR4-211ENST00000467272 SMAGPQ0VAQ4 97 aa7.15□□□□□ -1.26
UBR4-211ENST00000467272 RGS21Q2M5E4 152 aa7.15□□□□□ -1.26
UBR4-211ENST00000467272 BATF3Q9NR55 127 aa7.15□□□□□ -1.26
UBR4-211ENST00000467272 TRBV24-1A0A075B6N3 115 aa7.14□□□□□ -1.27
UBR4-211ENST00000467272 FCER1GP30273 86 aa7.14□□□□□ -1.27
UBR4-211ENST00000467272 MRPS36P82909 103 aaKnown RBP7.14□□□□□ -1.27
UBR4-211ENST00000467272 GAGE2EQ4V326 116 aa7.14□□□□□ -1.27
UBR4-211ENST00000467272 GAGE2DQ9UEU5 116 aa7.14□□□□□ -1.27
UBR4-211ENST00000467272 NDUFC2-KCTD14E9PQ53 114 aa7.13□□□□□ -1.27
UBR4-211ENST00000467272 TSPAN13O95857 204 aa7.13□□□□□ -1.27
UBR4-211ENST00000467272 PPP1R17O96001 155 aa7.13□□□□□ -1.27
UBR4-211ENST00000467272 RPL39P62891 51 aaKnown RBP7.13□□□□□ -1.27
UBR4-211ENST00000467272 KIR2DL4Q99706 377 aa7.13□□□□□ -1.27
UBR4-211ENST00000467272 TRBV30A0A0K0K1B3 111 aa7.12□□□□□ -1.27
UBR4-211ENST00000467272 C20orf78Q9BR46 151 aa7.12□□□□□ -1.27
UBR4-211ENST00000467272 PPP1R2P9O14990 202 aa7.11□□□□□ -1.27
UBR4-211ENST00000467272 UBE2BP63146 152 aa7.11□□□□□ -1.27
UBR4-211ENST00000467272 MRPL51Q4U2R6 128 aaKnown RBP7.11□□□□□ -1.27
UBR4-211ENST00000467272 LINC01551Q86U37 167 aa7.11□□□□□ -1.27
UBR4-211ENST00000467272 SPANXA1Q9NS26 97 aa7.11□□□□□ -1.27
UBR4-211ENST00000467272 NUPR1O60356 82 aa7.1□□□□□ -1.27
UBR4-211ENST00000467272 TPRXLQ17RH7 258 aa7.1□□□□□ -1.27
UBR4-211ENST00000467272 FAM104BQ5XKR9 115 aa7.1□□□□□ -1.27
UBR4-211ENST00000467272 C2orf82Q6UX34 121 aa7.1□□□□□ -1.27
UBR4-211ENST00000467272 TMEM18Q96B42 140 aa7.1□□□□□ -1.27
UBR4-211ENST00000467272 BORCS7Q96B45 105 aa7.1□□□□□ -1.27
UBR4-211ENST00000467272 OSTCQ9NRP0 149 aa7.1□□□□□ -1.27
UBR4-211ENST00000467272 V9GYV3 84 aa7.1□□□□□ -1.27
UBR4-211ENST00000467272 KRTAP13-2Q52LG2 175 aa7.09□□□□□ -1.27
UBR4-211ENST00000467272 LINC00242Q5T6M2 205 aa7.09□□□□□ -1.27
UBR4-211ENST00000467272 SLC51BQ86UW2 128 aa7.09□□□□□ -1.27
UBR4-211ENST00000467272 LINC00862A6NCI5 91 aa7.08□□□□□ -1.28
UBR4-211ENST00000467272 TCAPO15273 167 aa7.08□□□□□ -1.28
UBR4-211ENST00000467272 HBBP68871 147 aa7.08□□□□□ -1.28
UBR4-211ENST00000467272 LINC01561Q8N1V8 128 aa7.08□□□□□ -1.28
UBR4-211ENST00000467272 C22orf24Q9Y442 160 aa7.08□□□□□ -1.28
UBR4-211ENST00000467272 IFITM10A6NMD0 228 aa7.07□□□□□ -1.28
UBR4-211ENST00000467272 CRYGAP11844 174 aa7.07□□□□□ -1.28
UBR4-211ENST00000467272 RIGQ13278 110 aa7.07□□□□□ -1.28
UBR4-211ENST00000467272 KRTAP13-1Q8IUC0 172 aa7.07□□□□□ -1.28
UBR4-211ENST00000467272 CTDSP1Q9GZU7 261 aa7.07□□□□□ -1.28
UBR4-211ENST00000467272 PYGO1Q9Y3Y4 419 aa7.07□□□□□ -1.28
UBR4-211ENST00000467272 TNFRSF6BO95407 300 aa7.06□□□□□ -1.28
UBR4-211ENST00000467272 SMIM2Q9BVW6 85 aa7.06□□□□□ -1.28
UBR4-211ENST00000467272 TP73-AS1Q9UF72 201 aa7.06□□□□□ -1.28
UBR4-211ENST00000467272 TGIF2-C20orf24A0A0A6YYL0 155 aa7.05□□□□□ -1.28
UBR4-211ENST00000467272 BCE1O60756 84 aa7.05□□□□□ -1.28
UBR4-211ENST00000467272 TYMSOSQ8TAI1 123 aa7.05□□□□□ -1.28
UBR4-211ENST00000467272 IGLV4-3A0A075B6K6 122 aa7.04□□□□□ -1.28
UBR4-211ENST00000467272 ZNF727A8MUV8 499 aa7.04□□□□□ -1.28
UBR4-211ENST00000467272 CTAG1AP78358 180 aa7.04□□□□□ -1.28
UBR4-211ENST00000467272 FAM74A3Q4VXF1 159 aa7.04□□□□□ -1.28
UBR4-211ENST00000467272 TCTE3Q8IZS6 198 aa7.04□□□□□ -1.28
UBR4-211ENST00000467272 PACRGQ96M98 296 aaPredicted RBP7.04□□□□□ -1.28
UBR4-211ENST00000467272 RETNLBQ9BQ08 111 aa7.04□□□□□ -1.28
UBR4-211ENST00000467272 SMIM7Q9BQ49 75 aa7.04□□□□□ -1.28
UBR4-211ENST00000467272 ANAPC11Q9NYG5 84 aa7.04□□□□□ -1.28
UBR4-211ENST00000467272 NAT8BQ9UHF3 227 aa7.04□□□□□ -1.28
UBR4-211ENST00000467272 SMIM27A0A1W2PRY6 76 aa7.03□□□□□ -1.28
UBR4-211ENST00000467272 RPL28P46779 137 aaKnown RBP7.03□□□□□ -1.28
UBR4-211ENST00000467272 LBHQ53QV2 105 aaPredicted RBP7.03□□□□□ -1.28
UBR4-211ENST00000467272 FAM19A3Q7Z5A8 133 aa7.03□□□□□ -1.28
UBR4-211ENST00000467272 NPYP01303 97 aa7.02□□□□□ -1.29
UBR4-211ENST00000467272 CKS2P33552 79 aa7.02□□□□□ -1.29
UBR4-211ENST00000467272 FAM229BQ4G0N7 80 aa7.02□□□□□ -1.29
UBR4-211ENST00000467272 LINC00173Q6ZV60 143 aa7.02□□□□□ -1.29
UBR4-211ENST00000467272 CRCT1Q9UGL9 99 aa7.02□□□□□ -1.29
UBR4-211ENST00000467272 A0A1B0GW15 77 aa7.01□□□□□ -1.29
UBR4-211ENST00000467272 A0A1B0GXF2 115 aa7.01□□□□□ -1.29
UBR4-211ENST00000467272 D6R8Y8 96 aa7.01□□□□□ -1.29
UBR4-211ENST00000467272 SRP19P09132 144 aaKnown RBP7.01□□□□□ -1.29
UBR4-211ENST00000467272 BLOC1S1P78537 153 aa7.01□□□□□ -1.29
UBR4-211ENST00000467272 MRPL55Q7Z7F7 128 aaKnown RBP7.01□□□□□ -1.29
UBR4-211ENST00000467272 LINC00469Q8N7U9 141 aa7.01□□□□□ -1.29
UBR4-211ENST00000467272 CDIP1Q9H305 208 aa7.01□□□□□ -1.29
UBR4-211ENST00000467272 XAGE1AQ9HD64 81 aa7.01□□□□□ -1.29
UBR4-211ENST00000467272 IGLV7-46A0A075B6I9 117 aa7□□□□□ -1.29
UBR4-211ENST00000467272 PRSS47A8MTI9 375 aa7□□□□□ -1.29
UBR4-211ENST00000467272 CEBPGP53567 150 aa7□□□□□ -1.29
UBR4-211ENST00000467272 C4orf48Q5BLP8 95 aa7□□□□□ -1.29
UBR4-211ENST00000467272 Q8IZM0 81 aa7□□□□□ -1.29
UBR4-211ENST00000467272 TMEM141Q96I45 108 aa7□□□□□ -1.29
UBR4-211ENST00000467272 AMELXQ99217 191 aa7□□□□□ -1.29
UBR4-211ENST00000467272 EIF5A2Q9GZV4 153 aaKnown RBP7□□□□□ -1.29
UBR4-211ENST00000467272 IFI27P40305 119 aaPredicted RBP6.99□□□□□ -1.29
UBR4-211ENST00000467272 RPL23P62829 140 aaKnown RBP6.99□□□□□ -1.29
UBR4-211ENST00000467272 LINC00304Q8N9R0 145 aa6.99□□□□□ -1.29
UBR4-211ENST00000467272 LINC00167Q96N53 147 aa6.99□□□□□ -1.29
UBR4-211ENST00000467272 IGLV5-37A0A075B6J1 123 aa6.98□□□□□ -1.29
UBR4-211ENST00000467272 PPBPP02775 128 aa6.98□□□□□ -1.29
UBR4-211ENST00000467272 ALKAL2Q6UX46 152 aa6.98□□□□□ -1.29
UBR4-211ENST00000467272 KRTAP4-1Q9BYQ7 146 aa6.98□□□□□ -1.29
UBR4-211ENST00000467272 ZC2HC1BQ5TFG8 222 aa6.97□□□□□ -1.29
UBR4-211ENST00000467272 C2orf66Q6UXQ4 117 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms