RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 HERV-K104P63124 156 aa9.23□□□□□ -0.93
PDZRN3-205ENST00000466780 LINC00643Q86TS7 51 aa9.23□□□□□ -0.93
PDZRN3-205ENST00000466780 C4orf3Q8WVX3 66 aa9.23□□□□□ -0.93
PDZRN3-205ENST00000466780 TRBV10-1A0A0K0K1A3 114 aa9.22□□□□□ -0.93
PDZRN3-205ENST00000466780 PPDPFQ9H3Y8 114 aa9.21□□□□□ -0.93
PDZRN3-205ENST00000466780 Q9HAA7 133 aa9.21□□□□□ -0.93
PDZRN3-205ENST00000466780 FAM222AQ5U5X8 452 aa9.21□□□□□ -0.94
PDZRN3-205ENST00000466780 HIST2H2BCQ6DN03 193 aa9.21□□□□□ -0.94
PDZRN3-205ENST00000466780 FAM110AQ9BQ89 295 aa9.21□□□□□ -0.94
PDZRN3-205ENST00000466780 EPG5Q9HCE0 2579 aa9.2□□□□□ -0.94
PDZRN3-205ENST00000466780 LINC00337Q8N6G1 96 aa9.2□□□□□ -0.94
PDZRN3-205ENST00000466780 IGKV2-28A0A075B6P5 120 aa9.2□□□□□ -0.94
PDZRN3-205ENST00000466780 IGKV2D-28P01615 120 aa9.2□□□□□ -0.94
PDZRN3-205ENST00000466780 RPL28P46779 137 aaKnown RBP9.2□□□□□ -0.94
PDZRN3-205ENST00000466780 NOTCH3Q9UM47 2321 aa9.2□□□□□ -0.94
PDZRN3-205ENST00000466780 CHD6Q8TD26 2715 aa9.19□□□□□ -0.94
PDZRN3-205ENST00000466780 UBR5O95071 2799 aaPredicted RBP9.19□□□□□ -0.94
PDZRN3-205ENST00000466780 STHQ8IWL8 128 aa9.19□□□□□ -0.94
PDZRN3-205ENST00000466780 CR1P17927 2039 aa9.19□□□□□ -0.94
PDZRN3-205ENST00000466780 WNK1Q9H4A3 2382 aa9.19□□□□□ -0.94
PDZRN3-205ENST00000466780 DEFB113Q30KQ7 82 aa9.18□□□□□ -0.94
PDZRN3-205ENST00000466780 MIR7-3HGQ8N6C7 128 aa9.18□□□□□ -0.94
PDZRN3-205ENST00000466780 CUBNO60494 3623 aa9.18□□□□□ -0.94
PDZRN3-205ENST00000466780 CCDC168Q8NDH2 2452 aa9.18□□□□□ -0.94
PDZRN3-205ENST00000466780 TRAV13-2A0A0B4J235 113 aa9.18□□□□□ -0.94
PDZRN3-205ENST00000466780 CRPP02741 224 aa9.18□□□□□ -0.94
PDZRN3-205ENST00000466780 PF4P02776 101 aa9.18□□□□□ -0.94
PDZRN3-205ENST00000466780 MALP21145 153 aa9.18□□□□□ -0.94
PDZRN3-205ENST00000466780 TMEM243Q9BU79 118 aa9.18□□□□□ -0.94
PDZRN3-205ENST00000466780 SETD2Q9BYW2 2564 aaPredicted RBP9.17□□□□□ -0.94
PDZRN3-205ENST00000466780 LOC100131303A0A0U1RQF7 123 aa9.17□□□□□ -0.94
PDZRN3-205ENST00000466780 GAGE2AQ6NT46 116 aa9.17□□□□□ -0.94
PDZRN3-205ENST00000466780 ZNF843Q8N446 348 aa9.17□□□□□ -0.94
PDZRN3-205ENST00000466780 COX7B2Q8TF08 81 aa9.17□□□□□ -0.94
PDZRN3-205ENST00000466780 INAFM2P0DMQ5 153 aa9.17□□□□□ -0.94
PDZRN3-205ENST00000466780 C9orf129Q5T035 196 aaKnown RBP9.17□□□□□ -0.94
PDZRN3-205ENST00000466780 C5orf38Q86SI9 138 aa9.17□□□□□ -0.94
PDZRN3-205ENST00000466780 SND1-IT1Q9HBX3 110 aa9.17□□□□□ -0.94
PDZRN3-205ENST00000466780 NOP10Q9NPE3 64 aaKnown RBP9.17□□□□□ -0.94
PDZRN3-205ENST00000466780 UBE2L6O14933 153 aa9.16□□□□□ -0.94
PDZRN3-205ENST00000466780 A0A087WYN8 130 aa9.16□□□□□ -0.94
PDZRN3-205ENST00000466780 SMIM11BQ8TCY0 68 aa9.16□□□□□ -0.94
PDZRN3-205ENST00000466780 TMEM126AQ9H061 195 aa9.16□□□□□ -0.94
PDZRN3-205ENST00000466780 AKAP9Q99996 3911 aa9.15□□□□□ -0.94
PDZRN3-205ENST00000466780 TOMM7Q9P0U1 55 aa9.15□□□□□ -0.94
PDZRN3-205ENST00000466780 C3orf22Q8N5N4 141 aa9.15□□□□□ -0.95
PDZRN3-205ENST00000466780 C11orf44Q8N8P7 122 aa9.15□□□□□ -0.95
PDZRN3-205ENST00000466780 CXCL5P42830 114 aa9.14□□□□□ -0.95
PDZRN3-205ENST00000466780 APCP25054 2843 aa9.14□□□□□ -0.95
PDZRN3-205ENST00000466780 IGKV3OR2-268A0A0C4DH90 116 aa9.14□□□□□ -0.95
PDZRN3-205ENST00000466780 PLAC8L1A1L4L8 177 aa9.14□□□□□ -0.95
PDZRN3-205ENST00000466780 GIG44P09565 113 aaPredicted RBP9.14□□□□□ -0.95
PDZRN3-205ENST00000466780 CCL18P55774 89 aa9.14□□□□□ -0.95
PDZRN3-205ENST00000466780 NF1P21359 2839 aa9.14□□□□□ -0.95
PDZRN3-205ENST00000466780 JMJD1CQ15652 2540 aa9.13□□□□□ -0.95
PDZRN3-205ENST00000466780 ITPR3Q14573 2671 aa9.13□□□□□ -0.95
PDZRN3-205ENST00000466780 ZNF469Q96JG9 3925 aaPredicted RBP9.13□□□□□ -0.95
PDZRN3-205ENST00000466780 IGLV4-60A0A075B6I1 120 aa9.13□□□□□ -0.95
PDZRN3-205ENST00000466780 TRAV25A0A0B4J276 109 aa9.13□□□□□ -0.95
PDZRN3-205ENST00000466780 LINC00158P58513 81 aa9.13□□□□□ -0.95
PDZRN3-205ENST00000466780 C9orf153Q5TBE3 101 aa9.13□□□□□ -0.95
PDZRN3-205ENST00000466780 A0A1W2PRX2 142 aa9.12□□□□□ -0.95
PDZRN3-205ENST00000466780 UQCRQO14949 82 aa9.12□□□□□ -0.95
PDZRN3-205ENST00000466780 IGHV3OR16-9A0A0B4J2B5 98 aa9.11□□□□□ -0.95
PDZRN3-205ENST00000466780 ATP5G1P05496 136 aa9.11□□□□□ -0.95
PDZRN3-205ENST00000466780 C14orf132Q9NPU4 83 aa9.11□□□□□ -0.95
PDZRN3-205ENST00000466780 LINC00526Q96FQ7 95 aa9.11□□□□□ -0.95
PDZRN3-205ENST00000466780 SETXQ7Z333 2677 aaKnown RBP9.11□□□□□ -0.95
PDZRN3-205ENST00000466780 TRGV2A0A075B6R0 118 aa9.11□□□□□ -0.95
PDZRN3-205ENST00000466780 DNAL4O96015 105 aa9.11□□□□□ -0.95
PDZRN3-205ENST00000466780 PLA2G2AP14555 144 aa9.11□□□□□ -0.95
PDZRN3-205ENST00000466780 HIST1H4AP62805 103 aaKnown RBP9.11□□□□□ -0.95
PDZRN3-205ENST00000466780 OVOL2Q9BRP0 275 aa9.11□□□□□ -0.95
PDZRN3-205ENST00000466780 LRRC75A-AS1Q8N1F1 130 aa9.1□□□□□ -0.95
PDZRN3-205ENST00000466780 OBSCN-AS1Q96MR7 158 aa9.1□□□□□ -0.95
PDZRN3-205ENST00000466780 FLNAP21333 2647 aaKnown RBP9.1□□□□□ -0.95
PDZRN3-205ENST00000466780 TRBV6-4A0A1B0GX49 114 aa9.1□□□□□ -0.95
PDZRN3-205ENST00000466780 C2orf48Q96LS8 159 aa9.1□□□□□ -0.95
PDZRN3-205ENST00000466780 NIPBLQ6KC79 2804 aaeCLIP9.09□□□□□ -0.95
PDZRN3-205ENST00000466780 PFN2P35080 140 aa9.09□□□□□ -0.95
PDZRN3-205ENST00000466780 WFDC10AQ9H1F0 79 aa9.09□□□□□ -0.95
PDZRN3-205ENST00000466780 IBA57-AS1B1ANH7 110 aa9.09□□□□□ -0.95
PDZRN3-205ENST00000466780 H0YGX0 51 aa9.09□□□□□ -0.95
PDZRN3-205ENST00000466780 LECT2O14960 151 aa9.09□□□□□ -0.95
PDZRN3-205ENST00000466780 WFDC11Q8NEX6 87 aa9.08□□□□□ -0.96
PDZRN3-205ENST00000466780 A0A087WZ39 114 aa9.08□□□□□ -0.96
PDZRN3-205ENST00000466780 TRBV6-8A0A0A6YYG3 113 aa9.08□□□□□ -0.96
PDZRN3-205ENST00000466780 CCL24O00175 119 aa9.08□□□□□ -0.96
PDZRN3-205ENST00000466780 COX7CP15954 63 aa9.08□□□□□ -0.96
PDZRN3-205ENST00000466780 C16orf74Q96GX8 76 aa9.08□□□□□ -0.96
PDZRN3-205ENST00000466780 LINC00846Q9NV44 126 aa9.08□□□□□ -0.96
PDZRN3-205ENST00000466780 NBPF19A0A087WUL8 3843 aa9.07□□□□□ -0.96
PDZRN3-205ENST00000466780 ACANP16112 2415 aa9.07□□□□□ -0.96
PDZRN3-205ENST00000466780 KRTAP1-3Q8IUG1 177 aa9.07□□□□□ -0.96
PDZRN3-205ENST00000466780 KLK5Q9Y337 293 aaPredicted RBP9.07□□□□□ -0.96
PDZRN3-205ENST00000466780 TRGV4A0A0C4DH28 118 aa9.07□□□□□ -0.96
PDZRN3-205ENST00000466780 DNAJC9-AS1A6NH13 148 aa9.06□□□□□ -0.96
PDZRN3-205ENST00000466780 NCR3O14931 201 aa9.06□□□□□ -0.96
PDZRN3-205ENST00000466780 PAX4O43316 350 aa9.06□□□□□ -0.96
PDZRN3-205ENST00000466780 SLPIP03973 132 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms