RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 PF4P02776 101 aa13.21□□□□□ -0.29
TSPAN4-210ENST00000464987 TRBV20-1A0A075B6N2 111 aa13.2□□□□□ -0.3
TSPAN4-210ENST00000464987 SMIM1B2RUZ4 78 aa13.2□□□□□ -0.3
TSPAN4-210ENST00000464987 Q1RN00 199 aa13.2□□□□□ -0.3
TSPAN4-210ENST00000464987 IGLV5-39A0A0G2JS06 123 aa13.2□□□□□ -0.3
TSPAN4-210ENST00000464987 NDUFA1O15239 70 aa13.2□□□□□ -0.3
TSPAN4-210ENST00000464987 FHL2Q14192 279 aa13.2□□□□□ -0.3
TSPAN4-210ENST00000464987 FAM19A3Q7Z5A8 133 aa13.2□□□□□ -0.3
TSPAN4-210ENST00000464987 LINC00482Q8N8I6 264 aa13.2□□□□□ -0.3
TSPAN4-210ENST00000464987 Q9H8V8 135 aa13.2□□□□□ -0.3
TSPAN4-210ENST00000464987 A0A0U1RRA0 63 aa13.19□□□□□ -0.3
TSPAN4-210ENST00000464987 TRBV6-4A0A1B0GX49 114 aa13.19□□□□□ -0.3
TSPAN4-210ENST00000464987 TMEM243Q9BU79 118 aa13.19□□□□□ -0.3
TSPAN4-210ENST00000464987 UBE2L6O14933 153 aa13.18□□□□□ -0.3
TSPAN4-210ENST00000464987 FOXI1Q12951 378 aa13.18□□□□□ -0.3
TSPAN4-210ENST00000464987 F5H768 121 aa13.17□□□□□ -0.3
TSPAN4-210ENST00000464987 TRIAP1O43715 76 aa13.17□□□□□ -0.3
TSPAN4-210ENST00000464987 CRLF1O75462 422 aa13.17□□□□□ -0.3
TSPAN4-210ENST00000464987 DEFB130BP0DP73 79 aa13.16□□□□□ -0.3
TSPAN4-210ENST00000464987 DEFB130AP0DP74 79 aa13.16□□□□□ -0.3
TSPAN4-210ENST00000464987 GAGE6Q13070 117 aa13.16□□□□□ -0.3
TSPAN4-210ENST00000464987 TENM1Q9UKZ4 2725 aa13.16□□□□□ -0.3
TSPAN4-210ENST00000464987 MAST4O15021 2626 aa13.16□□□□□ -0.3
TSPAN4-210ENST00000464987 TRRAPQ9Y4A5 3859 aa13.16□□□□□ -0.3
TSPAN4-210ENST00000464987 CARD19Q96LW7 228 aa13.16□□□□□ -0.3
TSPAN4-210ENST00000464987 INAFM1C9JVW0 142 aa13.15□□□□□ -0.3
TSPAN4-210ENST00000464987 IGLV4-60A0A075B6I1 120 aa13.15□□□□□ -0.31
TSPAN4-210ENST00000464987 IGKV3OR2-268A0A0C4DH90 116 aa13.15□□□□□ -0.31
TSPAN4-210ENST00000464987 TIMM17BO60830 172 aa13.15□□□□□ -0.31
TSPAN4-210ENST00000464987 NSD1Q96L73 2696 aaPredicted RBP13.14□□□□□ -0.31
TSPAN4-210ENST00000464987 C9JAW5 83 aa13.14□□□□□ -0.31
TSPAN4-210ENST00000464987 ATP6V0E2Q8NHE4 81 aa13.14□□□□□ -0.31
TSPAN4-210ENST00000464987 CDIP1Q9H305 208 aa13.14□□□□□ -0.31
TSPAN4-210ENST00000464987 TRBV30A0A0K0K1B3 111 aa13.12□□□□□ -0.31
TSPAN4-210ENST00000464987 TEN1Q86WV5 123 aa13.12□□□□□ -0.31
TSPAN4-210ENST00000464987 ANKRD29Q8N6D5 301 aa13.12□□□□□ -0.31
TSPAN4-210ENST00000464987 ICOSQ9Y6W8 199 aa13.12□□□□□ -0.31
TSPAN4-210ENST00000464987 SLC25A20O43772 301 aa13.12□□□□□ -0.31
TSPAN4-210ENST00000464987 TRBV6-8A0A0A6YYG3 113 aa13.11□□□□□ -0.31
TSPAN4-210ENST00000464987 SOSTDC1Q6X4U4 206 aa13.11□□□□□ -0.31
TSPAN4-210ENST00000464987 LINC00308Q8TCZ7 52 aa13.11□□□□□ -0.31
TSPAN4-210ENST00000464987 X6R8D5 127 aa13.11□□□□□ -0.31
TSPAN4-210ENST00000464987 PRIMA1Q86XR5 153 aa13.1□□□□□ -0.31
TSPAN4-210ENST00000464987 RNF183Q96D59 192 aa13.1□□□□□ -0.31
TSPAN4-210ENST00000464987 IFITM1P13164 125 aa13.09□□□□□ -0.31
TSPAN4-210ENST00000464987 CIRBPQ14011 172 aaKnown RBP13.09□□□□□ -0.31
TSPAN4-210ENST00000464987 CHCHD5Q9BSY4 110 aa13.09□□□□□ -0.31
TSPAN4-210ENST00000464987 RPL13AP40429 203 aaKnown RBP13.09□□□□□ -0.31
TSPAN4-210ENST00000464987 H7C423 109 aa13.08□□□□□ -0.32
TSPAN4-210ENST00000464987 MT-ATP8P03928 68 aa13.08□□□□□ -0.32
TSPAN4-210ENST00000464987 ATXN8Q156A1 80 aa13.08□□□□□ -0.32
TSPAN4-210ENST00000464987 LINC01620Q4KN68 170 aa13.08□□□□□ -0.32
TSPAN4-210ENST00000464987 MEIG1Q5JSS6 88 aa13.08□□□□□ -0.32
TSPAN4-210ENST00000464987 KIR2DL5BQ8NHK3 375 aa13.08□□□□□ -0.32
TSPAN4-210ENST00000464987 PPDPFLQ8WWR9 84 aa13.08□□□□□ -0.32
TSPAN4-210ENST00000464987 LINC00612Q8N6U2 182 aa13.07□□□□□ -0.32
TSPAN4-210ENST00000464987 CLEC2BQ92478 149 aa13.07□□□□□ -0.32
TSPAN4-210ENST00000464987 SS18L2Q9UHA2 77 aa13.07□□□□□ -0.32
TSPAN4-210ENST00000464987 DEFB4AO15263 64 aa13.06□□□□□ -0.32
TSPAN4-210ENST00000464987 HIVEP1P15822 2718 aa13.05□□□□□ -0.32
TSPAN4-210ENST00000464987 A0A096LPF7 62 aa13.05□□□□□ -0.32
TSPAN4-210ENST00000464987 GYPEP15421 78 aa13.05□□□□□ -0.32
TSPAN4-210ENST00000464987 XGP55808 180 aa13.05□□□□□ -0.32
TSPAN4-210ENST00000464987 TOMM7Q9P0U1 55 aa13.04□□□□□ -0.32
TSPAN4-210ENST00000464987 ATRQ13535 2644 aa13.03□□□□□ -0.32
TSPAN4-210ENST00000464987 DEFB135Q30KP9 77 aa13.03□□□□□ -0.32
TSPAN4-210ENST00000464987 FAM222AQ5U5X8 452 aa13.03□□□□□ -0.32
TSPAN4-210ENST00000464987 IGHV3OR16-9A0A0B4J2B5 98 aa13.02□□□□□ -0.33
TSPAN4-210ENST00000464987 C9orf66Q5T8R8 295 aa13.02□□□□□ -0.33
TSPAN4-210ENST00000464987 COX7B2Q8TF08 81 aa13.02□□□□□ -0.33
TSPAN4-210ENST00000464987 ANAPC13Q9BS18 74 aa13.02□□□□□ -0.33
TSPAN4-210ENST00000464987 NTN5Q8WTR8 489 aaPredicted RBP13.01□□□□□ -0.33
TSPAN4-210ENST00000464987 C5orf38Q86SI9 138 aa13.01□□□□□ -0.33
TSPAN4-210ENST00000464987 TRBV10-2A0A0K0K1G8 114 aa13□□□□□ -0.33
TSPAN4-210ENST00000464987 COX6CP09669 75 aa13□□□□□ -0.33
TSPAN4-210ENST00000464987 HERV-K104P63124 156 aa13□□□□□ -0.33
TSPAN4-210ENST00000464987 TEP1Q99973 2627 aaKnown RBP13□□□□□ -0.33
TSPAN4-210ENST00000464987 M0QXV9 152 aa12.99□□□□□ -0.33
TSPAN4-210ENST00000464987 SHISA2Q6UWI4 295 aa12.99□□□□□ -0.33
TSPAN4-210ENST00000464987 TMEM262E9PQX1 116 aa12.98□□□□□ -0.33
TSPAN4-210ENST00000464987 CLPSL2Q6UWE3 100 aa12.98□□□□□ -0.33
TSPAN4-210ENST00000464987 TEX49A0A1B0GTD5 131 aa12.98□□□□□ -0.33
TSPAN4-210ENST00000464987 LINC00959A0A1B0GUT2 108 aa12.98□□□□□ -0.33
TSPAN4-210ENST00000464987 LST1O00453 97 aa12.98□□□□□ -0.33
TSPAN4-210ENST00000464987 PRO0255Q9UI72 69 aa12.98□□□□□ -0.33
TSPAN4-210ENST00000464987 SMIM9A6NGZ8 99 aa12.97□□□□□ -0.33
TSPAN4-210ENST00000464987 MIR7-3HGQ8N6C7 128 aa12.97□□□□□ -0.33
TSPAN4-210ENST00000464987 A0A087WZ39 114 aa12.96□□□□□ -0.33
TSPAN4-210ENST00000464987 B5MCH6 92 aa12.95□□□□□ -0.34
TSPAN4-210ENST00000464987 C2orf82Q6UX34 121 aa12.95□□□□□ -0.34
TSPAN4-210ENST00000464987 XCL1P47992 114 aa12.94□□□□□ -0.34
TSPAN4-210ENST00000464987 Q8N3U1 123 aa12.94□□□□□ -0.34
TSPAN4-210ENST00000464987 LINC01600Q96MT4 127 aa12.94□□□□□ -0.34
TSPAN4-210ENST00000464987 CITED1Q99966 193 aa12.94□□□□□ -0.34
TSPAN4-210ENST00000464987 C11orf68Q9H3H3 251 aaKnown RBP12.94□□□□□ -0.34
TSPAN4-210ENST00000464987 IGHV4-28A0A0C4DH34 117 aa12.94□□□□□ -0.34
TSPAN4-210ENST00000464987 PAX4O43316 350 aa12.94□□□□□ -0.34
TSPAN4-210ENST00000464987 NHLRC4P0CG21 123 aaPredicted RBP12.94□□□□□ -0.34
TSPAN4-210ENST00000464987 CELA1Q9UNI1 258 aa12.94□□□□□ -0.34
TSPAN4-210ENST00000464987 COPS9Q8WXC6 57 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms