RNA–Protein interactions for RNA: ENST00000462700.5

COL9A3-203, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 1,237 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-203ENST00000462700 TMEM141Q96I45 108 aa12.03□□□□□ -0.48
COL9A3-203ENST00000462700 CHTF8P0CG12 524 aa12.02□□□□□ -0.49
COL9A3-203ENST00000462700 COX6A2Q02221 97 aa12.02□□□□□ -0.49
COL9A3-203ENST00000462700 SVBPQ8N300 66 aa12.02□□□□□ -0.49
COL9A3-203ENST00000462700 SPACA4Q8TDM5 124 aa12.02□□□□□ -0.49
COL9A3-203ENST00000462700 CARD19Q96LW7 228 aa12.02□□□□□ -0.49
COL9A3-203ENST00000462700 ALKBH7Q9BT30 221 aaPredicted RBP12.02□□□□□ -0.49
COL9A3-203ENST00000462700 IGHV3OR16-9A0A0B4J2B5 98 aa12.01□□□□□ -0.49
COL9A3-203ENST00000462700 SNAPINO95295 136 aa12.01□□□□□ -0.49
COL9A3-203ENST00000462700 APOMO95445 188 aa12.01□□□□□ -0.49
COL9A3-203ENST00000462700 TEX43Q6ZNM6 134 aa12.01□□□□□ -0.49
COL9A3-203ENST00000462700 PRSS3P2Q8NHM4 247 aa12.01□□□□□ -0.49
COL9A3-203ENST00000462700 MRPL18Q9H0U6 180 aaKnown RBP12.01□□□□□ -0.49
COL9A3-203ENST00000462700 IGLV4-69A0A075B6H9 119 aa12□□□□□ -0.49
COL9A3-203ENST00000462700 SYCNQ0VAF6 134 aa12□□□□□ -0.49
COL9A3-203ENST00000462700 SRRM2Q9UQ35 2752 aaKnown RBP12□□□□□ -0.49
COL9A3-203ENST00000462700 TGIF2-C20orf24A0A0A6YYL0 155 aa11.99□□□□□ -0.49
COL9A3-203ENST00000462700 IGIPA6NJ69 53 aa11.99□□□□□ -0.49
COL9A3-203ENST00000462700 NPSP0C0P6 89 aa11.99□□□□□ -0.49
COL9A3-203ENST00000462700 FABP9Q0Z7S8 132 aa11.99□□□□□ -0.49
COL9A3-203ENST00000462700 Q6ZN92 141 aa11.99□□□□□ -0.49
COL9A3-203ENST00000462700 G0S2P27469 103 aa11.98□□□□□ -0.49
COL9A3-203ENST00000462700 LINC00242Q5T6M2 205 aa11.98□□□□□ -0.49
COL9A3-203ENST00000462700 LINC00173Q6ZV60 143 aa11.98□□□□□ -0.49
COL9A3-203ENST00000462700 OR10D4PQ8NGN7 298 aa11.98□□□□□ -0.49
COL9A3-203ENST00000462700 DPH3Q96FX2 82 aa11.98□□□□□ -0.49
COL9A3-203ENST00000462700 AMELXQ99217 191 aa11.98□□□□□ -0.49
COL9A3-203ENST00000462700 C2orf88Q9BSF0 95 aa11.98□□□□□ -0.49
COL9A3-203ENST00000462700 A0A087WYN8 130 aa11.97□□□□□ -0.49
COL9A3-203ENST00000462700 UBE2D1P51668 147 aa11.97□□□□□ -0.49
COL9A3-203ENST00000462700 KRTAP10-4P60372 401 aaPredicted RBP11.97□□□□□ -0.49
COL9A3-203ENST00000462700 SPAG11BQ08648 103 aa11.97□□□□□ -0.49
COL9A3-203ENST00000462700 ZC2HC1BQ5TFG8 222 aa11.97□□□□□ -0.49
COL9A3-203ENST00000462700 Q6ZRU5 148 aa11.97□□□□□ -0.49
COL9A3-203ENST00000462700 TOMM6Q96B49 74 aa11.97□□□□□ -0.49
COL9A3-203ENST00000462700 C2orf48Q96LS8 159 aa11.97□□□□□ -0.49
COL9A3-203ENST00000462700 CAMK2N2Q96S95 79 aa11.97□□□□□ -0.49
COL9A3-203ENST00000462700 PKIGQ9Y2B9 76 aa11.97□□□□□ -0.49
COL9A3-203ENST00000462700 A0A096LNI7 61 aa11.96□□□□□ -0.49
COL9A3-203ENST00000462700 IGKV2-24A0A0C4DH68 120 aa11.96□□□□□ -0.49
COL9A3-203ENST00000462700 LINC01546A6NGU7 62 aa11.96□□□□□ -0.49
COL9A3-203ENST00000462700 ORAOV1Q8WV07 137 aa11.96□□□□□ -0.49
COL9A3-203ENST00000462700 VCX2Q9H322 139 aa11.96□□□□□ -0.49
COL9A3-203ENST00000462700 MAJINQ3KP22 176 aa11.95□□□□□ -0.5
COL9A3-203ENST00000462700 TIMM17AQ99595 171 aa11.95□□□□□ -0.5
COL9A3-203ENST00000462700 PLAC8Q9NZF1 115 aa11.95□□□□□ -0.5
COL9A3-203ENST00000462700 A0A087WZ39 114 aa11.94□□□□□ -0.5
COL9A3-203ENST00000462700 PAPPA-AS1Q5QFB9 102 aa11.94□□□□□ -0.5
COL9A3-203ENST00000462700 TRAPPC1Q9Y5R8 145 aa11.94□□□□□ -0.5
COL9A3-203ENST00000462700 RPL37AP61513 92 aaKnown RBP11.93□□□□□ -0.5
COL9A3-203ENST00000462700 FA2HQ7L5A8 372 aa11.93□□□□□ -0.5
COL9A3-203ENST00000462700 ERASQ7Z444 233 aa11.92□□□□□ -0.5
COL9A3-203ENST00000462700 SCGB3A1Q96QR1 104 aa11.92□□□□□ -0.5
COL9A3-203ENST00000462700 LINC00474Q9P2X8 69 aa11.92□□□□□ -0.5
COL9A3-203ENST00000462700 MYCBP2O75592 4640 aa11.92□□□□□ -0.5
COL9A3-203ENST00000462700 F8WDY8 70 aa11.91□□□□□ -0.5
COL9A3-203ENST00000462700 FAM19A3Q7Z5A8 133 aa11.91□□□□□ -0.5
COL9A3-203ENST00000462700 STPG4Q8N801 248 aa11.91□□□□□ -0.5
COL9A3-203ENST00000462700 SMCO4Q9NRQ5 59 aa11.91□□□□□ -0.5
COL9A3-203ENST00000462700 LOC107984640A0A0U1RRK4 108 aa11.9□□□□□ -0.5
COL9A3-203ENST00000462700 LINC01549A6NIU2 74 aa11.9□□□□□ -0.5
COL9A3-203ENST00000462700 LINC01561Q8N1V8 128 aa11.9□□□□□ -0.5
COL9A3-203ENST00000462700 YPEL4Q96NS1 127 aa11.9□□□□□ -0.5
COL9A3-203ENST00000462700 PTTG1IPP53801 180 aa11.89□□□□□ -0.51
COL9A3-203ENST00000462700 RNF151Q2KHN1 245 aa11.89□□□□□ -0.51
COL9A3-203ENST00000462700 C18orf32Q8TCD1 76 aa11.89□□□□□ -0.51
COL9A3-203ENST00000462700 MRPL35Q9NZE8 188 aaKnown RBP11.89□□□□□ -0.51
COL9A3-203ENST00000462700 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.88□□□□□ -0.51
COL9A3-203ENST00000462700 NDUFA1O15239 70 aa11.88□□□□□ -0.51
COL9A3-203ENST00000462700 KIAA0087Q14695 138 aa11.88□□□□□ -0.51
COL9A3-203ENST00000462700 A0A0J9YXV3 536 aa11.87□□□□□ -0.51
COL9A3-203ENST00000462700 SEC11AP67812 179 aa11.87□□□□□ -0.51
COL9A3-203ENST00000462700 GAGE2BQ13066 116 aa11.87□□□□□ -0.51
COL9A3-203ENST00000462700 URB1-AS1Q96HZ7 61 aa11.87□□□□□ -0.51
COL9A3-203ENST00000462700 HERVK_113P63121 156 aa11.86□□□□□ -0.51
COL9A3-203ENST00000462700 C10orf25Q5T742 122 aa11.86□□□□□ -0.51
COL9A3-203ENST00000462700 SLC7A5P1Q8MH63 180 aa11.86□□□□□ -0.51
COL9A3-203ENST00000462700 RPL18AQ02543 176 aaKnown RBP11.85□□□□□ -0.51
COL9A3-203ENST00000462700 UNQ6190/PRO20217Q6UXQ8 127 aa11.85□□□□□ -0.51
COL9A3-203ENST00000462700 C7orf33Q8WU49 177 aa11.85□□□□□ -0.51
COL9A3-203ENST00000462700 LINC00614P0C842 121 aa11.84□□□□□ -0.51
COL9A3-203ENST00000462700 CBLN2Q8IUK8 224 aa11.84□□□□□ -0.51
COL9A3-203ENST00000462700 GEMIN7Q9H840 131 aaKnown RBP11.84□□□□□ -0.51
COL9A3-203ENST00000462700 C6orf48Q9UBA6 75 aa11.84□□□□□ -0.51
COL9A3-203ENST00000462700 CDKN2A-AS1Q9UH64 79 aa11.84□□□□□ -0.51
COL9A3-203ENST00000462700 A0A096LNJ9 63 aa11.83□□□□□ -0.52
COL9A3-203ENST00000462700 HNRNPA3P51991 378 aaKnown RBP11.82□□□□□ -0.52
COL9A3-203ENST00000462700 CST9LQ9H4G1 147 aa11.82□□□□□ -0.52
COL9A3-203ENST00000462700 PKHD1L1Q86WI1 4243 aa11.82□□□□□ -0.52
COL9A3-203ENST00000462700 FLG2Q5D862 2391 aaPredicted RBP11.81□□□□□ -0.52
COL9A3-203ENST00000462700 TINCRA0A1B0GVN0 87 aa11.81□□□□□ -0.52
COL9A3-203ENST00000462700 TLX1NBP0CAT3 122 aa11.81□□□□□ -0.52
COL9A3-203ENST00000462700 RAB5BP61020 215 aa11.81□□□□□ -0.52
COL9A3-203ENST00000462700 PMVKQ15126 192 aa11.81□□□□□ -0.52
COL9A3-203ENST00000462700 C2orf82Q6UX34 121 aa11.81□□□□□ -0.52
COL9A3-203ENST00000462700 PACRGQ96M98 296 aaPredicted RBP11.81□□□□□ -0.52
COL9A3-203ENST00000462700 HBDP02042 147 aa11.8□□□□□ -0.52
COL9A3-203ENST00000462700 PRSS2P07478 247 aa11.8□□□□□ -0.52
COL9A3-203ENST00000462700 Q8IZM0 81 aa11.8□□□□□ -0.52
COL9A3-203ENST00000462700 LINC00469Q8N7U9 141 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms