RNA–Protein interactions for RNA: ENST00000460569.1

UPF2-204, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF2, Length 640 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-204ENST00000460569 HERVK_113P63121 156 aa6.73□□□□□ -1.33
UPF2-204ENST00000460569 COX6A2Q02221 97 aa6.73□□□□□ -1.33
UPF2-204ENST00000460569 WFDC2Q14508 124 aa6.73□□□□□ -1.33
UPF2-204ENST00000460569 FAM19A3Q7Z5A8 133 aa6.73□□□□□ -1.33
UPF2-204ENST00000460569 C5orf38Q86SI9 138 aa6.73□□□□□ -1.33
UPF2-204ENST00000460569 CHAC1Q9BUX1 264 aa6.73□□□□□ -1.33
UPF2-204ENST00000460569 CHTOPQ9Y3Y2 248 aaKnown RBP6.73□□□□□ -1.33
UPF2-204ENST00000460569 RYR2Q92736 4967 aa6.72□□□□□ -1.33
UPF2-204ENST00000460569 HYDINQ4G0P3 5121 aa6.72□□□□□ -1.33
UPF2-204ENST00000460569 IGLV4-69A0A075B6H9 119 aa6.72□□□□□ -1.33
UPF2-204ENST00000460569 A0A087WTM6 91 aa6.72□□□□□ -1.33
UPF2-204ENST00000460569 IGHV3OR16-9A0A0B4J2B5 98 aa6.72□□□□□ -1.33
UPF2-204ENST00000460569 LRCOL1A6NCL2 159 aa6.72□□□□□ -1.33
UPF2-204ENST00000460569 C5orf52A6NGY3 159 aa6.72□□□□□ -1.33
UPF2-204ENST00000460569 USP17L23D6RBM5 183 aa6.72□□□□□ -1.33
UPF2-204ENST00000460569 EREGO14944 169 aa6.72□□□□□ -1.33
UPF2-204ENST00000460569 IGLC3P0DOY3 106 aa6.72□□□□□ -1.33
UPF2-204ENST00000460569 MALP21145 153 aa6.72□□□□□ -1.33
UPF2-204ENST00000460569 KRTDAPP60985 99 aa6.72□□□□□ -1.33
UPF2-204ENST00000460569 ODF1Q14990 250 aa6.72□□□□□ -1.33
UPF2-204ENST00000460569 LINC00469Q8N7U9 141 aa6.72□□□□□ -1.33
UPF2-204ENST00000460569 HIST1H2BLQ99880 126 aa6.72□□□□□ -1.33
UPF2-204ENST00000460569 MRPL35Q9NZE8 188 aaKnown RBP6.72□□□□□ -1.33
UPF2-204ENST00000460569 C11orf86A6NJI1 115 aa6.71□□□□□ -1.34
UPF2-204ENST00000460569 F8VRH5 84 aa6.71□□□□□ -1.34
UPF2-204ENST00000460569 SYS1-DBNDD2H3BUS1 97 aa6.71□□□□□ -1.34
UPF2-204ENST00000460569 C3orf79P0CE67 100 aa6.71□□□□□ -1.34
UPF2-204ENST00000460569 CFAP161Q6P656 301 aa6.71□□□□□ -1.34
UPF2-204ENST00000460569 C15orf56Q8N910 161 aa6.71□□□□□ -1.34
UPF2-204ENST00000460569 CDKN2A-AS1Q9UH64 79 aa6.71□□□□□ -1.34
UPF2-204ENST00000460569 DNAH2Q9P225 4427 aa6.7□□□□□ -1.34
UPF2-204ENST00000460569 A0A087WZ39 114 aa6.7□□□□□ -1.34
UPF2-204ENST00000460569 IGHV1-58A0A0C4DH39 117 aa6.7□□□□□ -1.34
UPF2-204ENST00000460569 APOMO95445 188 aa6.7□□□□□ -1.34
UPF2-204ENST00000460569 HIGD2BQ4VC39 106 aa6.7□□□□□ -1.34
UPF2-204ENST00000460569 C14orf177Q52M58 125 aa6.7□□□□□ -1.34
UPF2-204ENST00000460569 PMCHL2Q9BQD1 86 aa6.7□□□□□ -1.34
UPF2-204ENST00000460569 IGLV5-45A0A087WSX0 123 aa6.69□□□□□ -1.34
UPF2-204ENST00000460569 hDV102S1A0JD36 115 aa6.69□□□□□ -1.34
UPF2-204ENST00000460569 H3BRM9 83 aa6.69□□□□□ -1.34
UPF2-204ENST00000460569 ZNF22P17026 224 aaPredicted RBP6.69□□□□□ -1.34
UPF2-204ENST00000460569 TMEM170BQ5T4T1 132 aa6.69□□□□□ -1.34
UPF2-204ENST00000460569 PET117Q6UWS5 81 aa6.69□□□□□ -1.34
UPF2-204ENST00000460569 SPATA12Q7Z6I5 190 aa6.69□□□□□ -1.34
UPF2-204ENST00000460569 Q8N814 137 aa6.69□□□□□ -1.34
UPF2-204ENST00000460569 ORAOV1Q8WV07 137 aa6.69□□□□□ -1.34
UPF2-204ENST00000460569 DNAH10Q8IVF4 4471 aa6.68□□□□□ -1.34
UPF2-204ENST00000460569 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.68□□□□□ -1.34
UPF2-204ENST00000460569 GVQW2A0A096LPI5 108 aaPredicted RBP6.68□□□□□ -1.34
UPF2-204ENST00000460569 C20orf202A1L168 122 aa6.68□□□□□ -1.34
UPF2-204ENST00000460569 DPM2O94777 84 aa6.68□□□□□ -1.34
UPF2-204ENST00000460569 SPINK8P0C7L1 97 aa6.68□□□□□ -1.34
UPF2-204ENST00000460569 PLNP26678 52 aa6.68□□□□□ -1.34
UPF2-204ENST00000460569 SPAG11BQ08648 103 aa6.68□□□□□ -1.34
UPF2-204ENST00000460569 LINC01561Q8N1V8 128 aa6.68□□□□□ -1.34
UPF2-204ENST00000460569 IGHV3-64A0A075B6Q5 118 aa6.67□□□□□ -1.34
UPF2-204ENST00000460569 SMIM1B2RUZ4 78 aa6.67□□□□□ -1.34
UPF2-204ENST00000460569 ZNF561-AS1K7EIQ3 104 aa6.67□□□□□ -1.34
UPF2-204ENST00000460569 IGKCP01834 107 aa6.67□□□□□ -1.34
UPF2-204ENST00000460569 LINC01545Q5VT33 79 aa6.67□□□□□ -1.34
UPF2-204ENST00000460569 OR10D4PQ8NGN7 298 aa6.67□□□□□ -1.34
UPF2-204ENST00000460569 LINC00526Q96FQ7 95 aa6.67□□□□□ -1.34
UPF2-204ENST00000460569 RYR3Q15413 4870 aa6.67□□□□□ -1.34
UPF2-204ENST00000460569 TOMM7Q9P0U1 55 aa6.66□□□□□ -1.34
UPF2-204ENST00000460569 DNAH17Q9UFH2 4485 aa6.66□□□□□ -1.34
UPF2-204ENST00000460569 A0A1B0GVY2 172 aa6.65□□□□□ -1.34
UPF2-204ENST00000460569 PRSS2P07478 247 aa6.65□□□□□ -1.34
UPF2-204ENST00000460569 FUSP35637 526 aaKnown RBP eCLIP6.65□□□□□ -1.34
UPF2-204ENST00000460569 KRTAP10-2P60368 255 aa6.65□□□□□ -1.34
UPF2-204ENST00000460569 FRAS1Q86XX4 4008 aa6.65□□□□□ -1.35
UPF2-204ENST00000460569 IGLV5-52A0A0A0MRZ9 124 aa6.64□□□□□ -1.35
UPF2-204ENST00000460569 TMEM223A0PJW6 202 aa6.64□□□□□ -1.35
UPF2-204ENST00000460569 COX7B2Q8TF08 81 aa6.64□□□□□ -1.35
UPF2-204ENST00000460569 NTN5Q8WTR8 489 aaPredicted RBP6.64□□□□□ -1.35
UPF2-204ENST00000460569 CAMK2N2Q96S95 79 aa6.64□□□□□ -1.35
UPF2-204ENST00000460569 IGLV5-39A0A0G2JS06 123 aa6.63□□□□□ -1.35
UPF2-204ENST00000460569 HERVK_113P61574 105 aa6.63□□□□□ -1.35
UPF2-204ENST00000460569 C6orf226Q5I0X4 101 aa6.63□□□□□ -1.35
UPF2-204ENST00000460569 Q8IZM0 81 aa6.63□□□□□ -1.35
UPF2-204ENST00000460569 ATOH7Q8N100 152 aa6.63□□□□□ -1.35
UPF2-204ENST00000460569 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.62□□□□□ -1.35
UPF2-204ENST00000460569 NDUFA1O15239 70 aa6.62□□□□□ -1.35
UPF2-204ENST00000460569 SLPIP03973 132 aa6.62□□□□□ -1.35
UPF2-204ENST00000460569 AKR1D1P51857 326 aa6.62□□□□□ -1.35
UPF2-204ENST00000460569 CKS1BP61024 79 aa6.62□□□□□ -1.35
UPF2-204ENST00000460569 CNBPP62633 177 aaKnown RBP6.62□□□□□ -1.35
UPF2-204ENST00000460569 SYCNQ0VAF6 134 aa6.62□□□□□ -1.35
UPF2-204ENST00000460569 KIAA0087Q14695 138 aa6.62□□□□□ -1.35
UPF2-204ENST00000460569 CDPF1Q6NVV7 123 aa6.62□□□□□ -1.35
UPF2-204ENST00000460569 Q6ZRU5 148 aa6.62□□□□□ -1.35
UPF2-204ENST00000460569 C2orf48Q96LS8 159 aa6.62□□□□□ -1.35
UPF2-204ENST00000460569 CARD19Q96LW7 228 aa6.62□□□□□ -1.35
UPF2-204ENST00000460569 FAT2Q9NYQ8 4349 aa6.62□□□□□ -1.35
UPF2-204ENST00000460569 SCGB1D1O95968 90 aa6.61□□□□□ -1.35
UPF2-204ENST00000460569 CXCL5P42830 114 aa6.61□□□□□ -1.35
UPF2-204ENST00000460569 C2orf82Q6UX34 121 aa6.61□□□□□ -1.35
UPF2-204ENST00000460569 PGPEP1Q9NXJ5 209 aa6.61□□□□□ -1.35
UPF2-204ENST00000460569 F8WDY8 70 aa6.6□□□□□ -1.35
UPF2-204ENST00000460569 LINC01620Q4KN68 170 aa6.6□□□□□ -1.35
UPF2-204ENST00000460569 UNQ6190/PRO20217Q6UXQ8 127 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms