RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 F8P00451 2351 aa11.2□□□□□ -0.62
LMNB1-203ENST00000460265 RHOHQ15669 191 aa11.2□□□□□ -0.62
LMNB1-203ENST00000460265 A8MZ25 164 aa11.19□□□□□ -0.62
LMNB1-203ENST00000460265 FSHBP01225 129 aa11.19□□□□□ -0.62
LMNB1-203ENST00000460265 RPL36AP83881 106 aaKnown RBP11.19□□□□□ -0.62
LMNB1-203ENST00000460265 RPL36ALQ969Q0 106 aaKnown RBP11.19□□□□□ -0.62
LMNB1-203ENST00000460265 IMUPQ9GZP8 106 aa11.19□□□□□ -0.62
LMNB1-203ENST00000460265 TOMM7Q9P0U1 55 aa11.19□□□□□ -0.62
LMNB1-203ENST00000460265 hADV29S1A0JD25 119 aa11.18□□□□□ -0.62
LMNB1-203ENST00000460265 NXPH4O95158 308 aa11.18□□□□□ -0.62
LMNB1-203ENST00000460265 POM121L12Q8N7R1 296 aa11.18□□□□□ -0.62
LMNB1-203ENST00000460265 PLA2G2AP14555 144 aa11.17□□□□□ -0.62
LMNB1-203ENST00000460265 TENM4Q6N022 2769 aa11.17□□□□□ -0.62
LMNB1-203ENST00000460265 IGLV4-3A0A075B6K6 122 aa11.17□□□□□ -0.62
LMNB1-203ENST00000460265 LEPROTO15243 131 aa11.17□□□□□ -0.62
LMNB1-203ENST00000460265 TRACP01848 142 aa11.17□□□□□ -0.62
LMNB1-203ENST00000460265 AMELXQ99217 191 aa11.16□□□□□ -0.62
LMNB1-203ENST00000460265 NBPF19A0A087WUL8 3843 aa11.16□□□□□ -0.62
LMNB1-203ENST00000460265 TRBV6-5A0A0K0K1A5 114 aa11.16□□□□□ -0.62
LMNB1-203ENST00000460265 COX7CP15954 63 aa11.16□□□□□ -0.62
LMNB1-203ENST00000460265 LINC00467Q9BRT7 94 aa11.16□□□□□ -0.62
LMNB1-203ENST00000460265 A0A096LPF7 62 aa11.15□□□□□ -0.62
LMNB1-203ENST00000460265 A0A1B0GX51 115 aa11.15□□□□□ -0.62
LMNB1-203ENST00000460265 TMEM223A0PJW6 202 aa11.15□□□□□ -0.62
LMNB1-203ENST00000460265 ACYP1P07311 99 aa11.15□□□□□ -0.62
LMNB1-203ENST00000460265 LINC00643Q86TS7 51 aa11.15□□□□□ -0.62
LMNB1-203ENST00000460265 DAND5Q8N907 189 aa11.15□□□□□ -0.62
LMNB1-203ENST00000460265 F5H768 121 aa11.14□□□□□ -0.63
LMNB1-203ENST00000460265 NDUFA12Q9UI09 145 aa11.14□□□□□ -0.63
LMNB1-203ENST00000460265 A0A0J9YXY3 114 aa11.14□□□□□ -0.63
LMNB1-203ENST00000460265 RS1O15537 224 aa11.14□□□□□ -0.63
LMNB1-203ENST00000460265 TMEM86BQ8N661 226 aa11.14□□□□□ -0.63
LMNB1-203ENST00000460265 HTN3P15516 51 aa11.13□□□□□ -0.63
LMNB1-203ENST00000460265 KRTAP1-3Q8IUG1 177 aa11.13□□□□□ -0.63
LMNB1-203ENST00000460265 SPANXDQ9BXN6 97 aa11.13□□□□□ -0.63
LMNB1-203ENST00000460265 LST1O00453 97 aa11.12□□□□□ -0.63
LMNB1-203ENST00000460265 DEFB4AO15263 64 aa11.12□□□□□ -0.63
LMNB1-203ENST00000460265 RNF152Q8N8N0 203 aa11.12□□□□□ -0.63
LMNB1-203ENST00000460265 IGHV3-30-3P0DP02 117 aa11.12□□□□□ -0.63
LMNB1-203ENST00000460265 C1orf158Q8N1D5 194 aa11.12□□□□□ -0.63
LMNB1-203ENST00000460265 HRCT1Q6UXD1 115 aa11.11□□□□□ -0.63
LMNB1-203ENST00000460265 ATP5G1P05496 136 aa11.11□□□□□ -0.63
LMNB1-203ENST00000460265 Q8N2B8 174 aa11.11□□□□□ -0.63
LMNB1-203ENST00000460265 KIR2DL5BQ8NHK3 375 aa11.11□□□□□ -0.63
LMNB1-203ENST00000460265 WIPF1O43516 503 aa11.1□□□□□ -0.63
LMNB1-203ENST00000460265 LINC01600Q96MT4 127 aa11.1□□□□□ -0.63
LMNB1-203ENST00000460265 C11orf68Q9H3H3 251 aaKnown RBP11.1□□□□□ -0.63
LMNB1-203ENST00000460265 RPS28P62857 69 aaKnown RBP11.1□□□□□ -0.63
LMNB1-203ENST00000460265 SMCR5Q8TEV8 140 aa11.1□□□□□ -0.63
LMNB1-203ENST00000460265 LOC100131303A0A0U1RQF7 123 aa11.09□□□□□ -0.63
LMNB1-203ENST00000460265 C4orf26Q17RF5 130 aa11.09□□□□□ -0.63
LMNB1-203ENST00000460265 DSCR8Q96T75 97 aa11.09□□□□□ -0.63
LMNB1-203ENST00000460265 CDKN2A-AS1Q9UH64 79 aa11.09□□□□□ -0.63
LMNB1-203ENST00000460265 INAFM1C9JVW0 142 aa11.08□□□□□ -0.64
LMNB1-203ENST00000460265 CIRBPQ14011 172 aaKnown RBP11.08□□□□□ -0.64
LMNB1-203ENST00000460265 DEFB121Q5J5C9 76 aa11.08□□□□□ -0.64
LMNB1-203ENST00000460265 SPANXCQ9NY87 97 aa11.08□□□□□ -0.64
LMNB1-203ENST00000460265 ATOX1O00244 68 aa11.08□□□□□ -0.64
LMNB1-203ENST00000460265 MAST4O15021 2626 aa11.07□□□□□ -0.64
LMNB1-203ENST00000460265 K7EQD1 137 aa11.07□□□□□ -0.64
LMNB1-203ENST00000460265 ADAMTSL4-AS1Q5T5F5 129 aa11.07□□□□□ -0.64
LMNB1-203ENST00000460265 PRIMA1Q86XR5 153 aa11.07□□□□□ -0.64
LMNB1-203ENST00000460265 LINC00482Q8N8I6 264 aa11.07□□□□□ -0.64
LMNB1-203ENST00000460265 CRYGAP11844 174 aa11.06□□□□□ -0.64
LMNB1-203ENST00000460265 CLPSL2Q6UWE3 100 aa11.06□□□□□ -0.64
LMNB1-203ENST00000460265 C11orf72Q8NBR9 251 aa11.06□□□□□ -0.64
LMNB1-203ENST00000460265 RNASE1P07998 156 aaKnown RBP11.05□□□□□ -0.64
LMNB1-203ENST00000460265 DPH3Q96FX2 82 aa11.05□□□□□ -0.64
LMNB1-203ENST00000460265 LY6G6DO95868 133 aa11.05□□□□□ -0.64
LMNB1-203ENST00000460265 DAZ2Q13117 558 aaKnown RBP11.05□□□□□ -0.64
LMNB1-203ENST00000460265 DAZ4Q86SG3 579 aaKnown RBP11.05□□□□□ -0.64
LMNB1-203ENST00000460265 DAZ3Q9NR90 486 aaKnown RBP11.05□□□□□ -0.64
LMNB1-203ENST00000460265 Q9H8V8 135 aa11.05□□□□□ -0.64
LMNB1-203ENST00000460265 CMC4P56277 68 aaPredicted RBP11.04□□□□□ -0.64
LMNB1-203ENST00000460265 TMEM243Q9BU79 118 aa11.04□□□□□ -0.64
LMNB1-203ENST00000460265 UBE2D4Q9Y2X8 147 aa11.04□□□□□ -0.64
LMNB1-203ENST00000460265 SDIM1Q6ZPB5 146 aa11.04□□□□□ -0.64
LMNB1-203ENST00000460265 BAALC-AS2P0C853 105 aa11.03□□□□□ -0.64
LMNB1-203ENST00000460265 CHCHD7Q9BUK0 85 aa11.03□□□□□ -0.64
LMNB1-203ENST00000460265 ZNF469Q96JG9 3925 aaPredicted RBP11.03□□□□□ -0.64
LMNB1-203ENST00000460265 IGHV1-58A0A0C4DH39 117 aa11.03□□□□□ -0.64
LMNB1-203ENST00000460265 IGKV3D-7A0A0C4DH55 119 aa11.02□□□□□ -0.65
LMNB1-203ENST00000460265 HILS1P60008 231 aa11.02□□□□□ -0.65
LMNB1-203ENST00000460265 TMEM258P61165 79 aa11.02□□□□□ -0.65
LMNB1-203ENST00000460265 MIAQ16674 131 aa11.02□□□□□ -0.65
LMNB1-203ENST00000460265 CXCL5P42830 114 aa11.01□□□□□ -0.65
LMNB1-203ENST00000460265 CYSTM1Q9H1C7 97 aa11.01□□□□□ -0.65
LMNB1-203ENST00000460265 DEFB135Q30KP9 77 aa11.01□□□□□ -0.65
LMNB1-203ENST00000460265 C2orf48Q96LS8 159 aa11.01□□□□□ -0.65
LMNB1-203ENST00000460265 C16orf74Q96GX8 76 aa11.01□□□□□ -0.65
LMNB1-203ENST00000460265 C5orf38Q86SI9 138 aa11□□□□□ -0.65
LMNB1-203ENST00000460265 VSIG2Q96IQ7 327 aa11□□□□□ -0.65
LMNB1-203ENST00000460265 TIRAPP58753 221 aa11□□□□□ -0.65
LMNB1-203ENST00000460265 NOTCH1P46531 2555 aa10.99□□□□□ -0.65
LMNB1-203ENST00000460265 PYGO1Q9Y3Y4 419 aa10.99□□□□□ -0.65
LMNB1-203ENST00000460265 IGLV1-51P01701 117 aa10.99□□□□□ -0.65
LMNB1-203ENST00000460265 COX6A2Q02221 97 aa10.99□□□□□ -0.65
LMNB1-203ENST00000460265 LITAFQ99732 161 aa10.99□□□□□ -0.65
LMNB1-203ENST00000460265 STAB1Q9NY15 2570 aa10.98□□□□□ -0.65
LMNB1-203ENST00000460265 PFN2P35080 140 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms