RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 CIRBPQ14011 172 aaKnown RBP4.73□□□□□ -1.65
ECHDC1-210ENST00000454859 MPV17L2Q567V2 206 aa4.73□□□□□ -1.65
ECHDC1-210ENST00000454859 SCGB1D4Q6XE38 83 aa4.73□□□□□ -1.65
ECHDC1-210ENST00000454859 CEND1Q8N111 149 aa4.73□□□□□ -1.65
ECHDC1-210ENST00000454859 PGPEP1Q9NXJ5 209 aa4.73□□□□□ -1.65
ECHDC1-210ENST00000454859 FBN1P35555 2871 aaKnown RBP4.73□□□□□ -1.65
ECHDC1-210ENST00000454859 CEMP1Q6PRD7 247 aaPredicted RBP4.72□□□□□ -1.65
ECHDC1-210ENST00000454859 LYPD5Q6UWN5 251 aa4.72□□□□□ -1.65
ECHDC1-210ENST00000454859 MDFIQ99750 246 aa4.72□□□□□ -1.65
ECHDC1-210ENST00000454859 DEFB131BA0A096LNP1 70 aa4.72□□□□□ -1.65
ECHDC1-210ENST00000454859 IGHV3OR16-9A0A0B4J2B5 98 aa4.72□□□□□ -1.65
ECHDC1-210ENST00000454859 A0A0J9YWU9 116 aa4.72□□□□□ -1.65
ECHDC1-210ENST00000454859 A0A0J9YY99 117 aa4.72□□□□□ -1.65
ECHDC1-210ENST00000454859 LINC00959A0A1B0GUT2 108 aa4.72□□□□□ -1.65
ECHDC1-210ENST00000454859 A0A1B0GWB2 263 aa4.72□□□□□ -1.65
ECHDC1-210ENST00000454859 EREGO14944 169 aa4.72□□□□□ -1.65
ECHDC1-210ENST00000454859 CXCL5P42830 114 aa4.72□□□□□ -1.65
ECHDC1-210ENST00000454859 MAPKAPK5-AS1Q8N8E1 139 aa4.72□□□□□ -1.65
ECHDC1-210ENST00000454859 SPANXDQ9BXN6 97 aa4.72□□□□□ -1.65
ECHDC1-210ENST00000454859 PRR34Q9NV39 138 aa4.72□□□□□ -1.65
ECHDC1-210ENST00000454859 SPANXCQ9NY87 97 aa4.72□□□□□ -1.65
ECHDC1-210ENST00000454859 DEFB4AO15263 64 aa4.71□□□□□ -1.66
ECHDC1-210ENST00000454859 HINT1P49773 126 aaPredicted RBP4.71□□□□□ -1.66
ECHDC1-210ENST00000454859 CD164L2Q6UWJ8 174 aa4.71□□□□□ -1.66
ECHDC1-210ENST00000454859 HIST1H4GQ99525 98 aa4.71□□□□□ -1.66
ECHDC1-210ENST00000454859 CDKN2A-AS1Q9UH64 79 aa4.71□□□□□ -1.66
ECHDC1-210ENST00000454859 DNAH3Q8TD57 4116 aa4.71□□□□□ -1.66
ECHDC1-210ENST00000454859 SMIM1B2RUZ4 78 aa4.71□□□□□ -1.66
ECHDC1-210ENST00000454859 TMEM262E9PQX1 116 aa4.71□□□□□ -1.66
ECHDC1-210ENST00000454859 SMIM13P0DJ93 91 aa4.71□□□□□ -1.66
ECHDC1-210ENST00000454859 RPL24P83731 157 aaKnown RBP4.71□□□□□ -1.66
ECHDC1-210ENST00000454859 NDUFA12Q9UI09 145 aa4.71□□□□□ -1.66
ECHDC1-210ENST00000454859 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.7□□□□□ -1.66
ECHDC1-210ENST00000454859 TRAV13-1A0A0B4J241 112 aa4.7□□□□□ -1.66
ECHDC1-210ENST00000454859 APOMO95445 188 aa4.7□□□□□ -1.66
ECHDC1-210ENST00000454859 MIAQ16674 131 aa4.7□□□□□ -1.66
ECHDC1-210ENST00000454859 DEFB121Q5J5C9 76 aa4.7□□□□□ -1.66
ECHDC1-210ENST00000454859 LINC01556Q5JQF7 62 aa4.7□□□□□ -1.66
ECHDC1-210ENST00000454859 LCE2CQ5TA81 110 aa4.7□□□□□ -1.66
ECHDC1-210ENST00000454859 Q6ZTC4 211 aa4.7□□□□□ -1.66
ECHDC1-210ENST00000454859 IGLV4-60A0A075B6I1 120 aa4.69□□□□□ -1.66
ECHDC1-210ENST00000454859 SRSF9Q13242 221 aaKnown RBP eCLIP4.69□□□□□ -1.66
ECHDC1-210ENST00000454859 UPK3BQ9BT76 320 aa4.69□□□□□ -1.66
ECHDC1-210ENST00000454859 RETNQ9HD89 108 aa4.69□□□□□ -1.66
ECHDC1-210ENST00000454859 ANK2Q01484 3957 aa4.69□□□□□ -1.66
ECHDC1-210ENST00000454859 HTN3P15516 51 aa4.69□□□□□ -1.66
ECHDC1-210ENST00000454859 COX6A2Q02221 97 aa4.69□□□□□ -1.66
ECHDC1-210ENST00000454859 REG3AQ06141 175 aa4.69□□□□□ -1.66
ECHDC1-210ENST00000454859 LYRM7Q5U5X0 104 aa4.69□□□□□ -1.66
ECHDC1-210ENST00000454859 Q8IZM0 81 aa4.69□□□□□ -1.66
ECHDC1-210ENST00000454859 ZNF625Q96I27 306 aaPredicted RBP4.69□□□□□ -1.66
ECHDC1-210ENST00000454859 COX11Q9Y6N1 276 aa4.69□□□□□ -1.66
ECHDC1-210ENST00000454859 TSPEAR-AS2P59090 65 aa4.68□□□□□ -1.66
ECHDC1-210ENST00000454859 COX17Q14061 63 aa4.68□□□□□ -1.66
ECHDC1-210ENST00000454859 MRAPQ8TCY5 172 aa4.68□□□□□ -1.66
ECHDC1-210ENST00000454859 COX7B2Q8TF08 81 aa4.68□□□□□ -1.66
ECHDC1-210ENST00000454859 DEFB104AQ8WTQ1 72 aa4.68□□□□□ -1.66
ECHDC1-210ENST00000454859 KLK5Q9Y337 293 aaPredicted RBP4.68□□□□□ -1.66
ECHDC1-210ENST00000454859 C9orf118A6NHY6 69 aa4.68□□□□□ -1.66
ECHDC1-210ENST00000454859 IBA57-AS1B1ANH7 110 aa4.68□□□□□ -1.66
ECHDC1-210ENST00000454859 COX7A2LO14548 114 aa4.68□□□□□ -1.66
ECHDC1-210ENST00000454859 IGHV3-30P01768 117 aa4.68□□□□□ -1.66
ECHDC1-210ENST00000454859 ANGP03950 147 aaKnown RBP4.68□□□□□ -1.66
ECHDC1-210ENST00000454859 SPINK8P0C7L1 97 aa4.68□□□□□ -1.66
ECHDC1-210ENST00000454859 DNAH10OSP0CZ25 163 aa4.68□□□□□ -1.66
ECHDC1-210ENST00000454859 IGHV3-30-5P0DP03 117 aa4.68□□□□□ -1.66
ECHDC1-210ENST00000454859 BATFQ16520 125 aa4.68□□□□□ -1.66
ECHDC1-210ENST00000454859 C10orf126Q8N4M7 172 aa4.68□□□□□ -1.66
ECHDC1-210ENST00000454859 KRTAP17-1Q9BYP8 105 aa4.68□□□□□ -1.66
ECHDC1-210ENST00000454859 A0A0B4J2C4 111 aa4.67□□□□□ -1.66
ECHDC1-210ENST00000454859 CCL18P55774 89 aa4.67□□□□□ -1.66
ECHDC1-210ENST00000454859 NANOS2P60321 138 aaKnown RBP4.67□□□□□ -1.66
ECHDC1-210ENST00000454859 RNASE13Q5GAN3 156 aaKnown RBP4.67□□□□□ -1.66
ECHDC1-210ENST00000454859 IGHV3-64A0A075B6Q5 118 aa4.67□□□□□ -1.66
ECHDC1-210ENST00000454859 TRAV8-3A0A0A6YYJ7 113 aa4.67□□□□□ -1.66
ECHDC1-210ENST00000454859 TAX1BP3O14907 124 aa4.67□□□□□ -1.66
ECHDC1-210ENST00000454859 CRPP02741 224 aa4.67□□□□□ -1.66
ECHDC1-210ENST00000454859 LINC00269Q8N2A0 174 aa4.67□□□□□ -1.66
ECHDC1-210ENST00000454859 RMI2Q96E14 147 aa4.67□□□□□ -1.66
ECHDC1-210ENST00000454859 CMYA5Q8N3K9 4069 aa4.67□□□□□ -1.66
ECHDC1-210ENST00000454859 PRSS2P07478 247 aa4.66□□□□□ -1.66
ECHDC1-210ENST00000454859 CHCHD10Q8WYQ3 142 aaPredicted RBP4.66□□□□□ -1.66
ECHDC1-210ENST00000454859 LITAFQ99732 161 aa4.66□□□□□ -1.66
ECHDC1-210ENST00000454859 TTTY13Q9BZ97 58 aa4.66□□□□□ -1.66
ECHDC1-210ENST00000454859 LOC107984156A0A0G2JMH3 177 aa4.66□□□□□ -1.66
ECHDC1-210ENST00000454859 GTF2H5Q6ZYL4 71 aa4.66□□□□□ -1.66
ECHDC1-210ENST00000454859 ARL17AQ8IVW1 177 aa4.66□□□□□ -1.66
ECHDC1-210ENST00000454859 Q9H8V8 135 aa4.66□□□□□ -1.66
ECHDC1-210ENST00000454859 GVQW2A0A096LPI5 108 aaPredicted RBP4.65□□□□□ -1.66
ECHDC1-210ENST00000454859 NUPR2A6NF83 97 aa4.65□□□□□ -1.66
ECHDC1-210ENST00000454859 FXYD2P54710 66 aa4.65□□□□□ -1.66
ECHDC1-210ENST00000454859 ESRGQ1W209 222 aa4.65□□□□□ -1.66
ECHDC1-210ENST00000454859 CFAP161Q6P656 301 aa4.65□□□□□ -1.66
ECHDC1-210ENST00000454859 NBEAL1Q6ZS30 2694 aa4.65□□□□□ -1.67
ECHDC1-210ENST00000454859 TRRAPQ9Y4A5 3859 aa4.65□□□□□ -1.67
ECHDC1-210ENST00000454859 MALP21145 153 aa4.64□□□□□ -1.67
ECHDC1-210ENST00000454859 FOXI1Q12951 378 aa4.64□□□□□ -1.67
ECHDC1-210ENST00000454859 C6orf226Q5I0X4 101 aa4.64□□□□□ -1.67
ECHDC1-210ENST00000454859 PKD1L1Q8TDX9 2849 aa4.64□□□□□ -1.67
ECHDC1-210ENST00000454859 MEIG1Q5JSS6 88 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms