RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 NRACQ8N912 160 aa9.98□□□□□ -0.81
UBE2D4-209ENST00000454428 KRTAP13-2Q52LG2 175 aa9.97□□□□□ -0.81
UBE2D4-209ENST00000454428 KANTRA0A1W2PQU2 76 aa9.96□□□□□ -0.82
UBE2D4-209ENST00000454428 NDUFC2-KCTD14E9PQ53 114 aa9.96□□□□□ -0.82
UBE2D4-209ENST00000454428 GATCO43716 136 aaKnown RBP9.96□□□□□ -0.82
UBE2D4-209ENST00000454428 CRYGAP11844 174 aa9.96□□□□□ -0.82
UBE2D4-209ENST00000454428 SMAGPQ0VAQ4 97 aa9.96□□□□□ -0.82
UBE2D4-209ENST00000454428 CTDSP1Q9GZU7 261 aa9.96□□□□□ -0.82
UBE2D4-209ENST00000454428 ANAPC11Q9NYG5 84 aa9.96□□□□□ -0.82
UBE2D4-209ENST00000454428 HMSDA8MTL9 139 aa9.95□□□□□ -0.82
UBE2D4-209ENST00000454428 A8MWL6 223 aa9.95□□□□□ -0.82
UBE2D4-209ENST00000454428 NUPR1O60356 82 aa9.95□□□□□ -0.82
UBE2D4-209ENST00000454428 SUMO2P61956 95 aaKnown RBP9.95□□□□□ -0.82
UBE2D4-209ENST00000454428 C2orf82Q6UX34 121 aa9.95□□□□□ -0.82
UBE2D4-209ENST00000454428 RPL39P62891 51 aaKnown RBP9.94□□□□□ -0.82
UBE2D4-209ENST00000454428 FAM231DQ6ZW35 169 aa9.94□□□□□ -0.82
UBE2D4-209ENST00000454428 IGLV7-46A0A075B6I9 117 aa9.93□□□□□ -0.82
UBE2D4-209ENST00000454428 TRBV30A0A0K0K1B3 111 aa9.93□□□□□ -0.82
UBE2D4-209ENST00000454428 C22orf24Q9Y442 160 aa9.93□□□□□ -0.82
UBE2D4-209ENST00000454428 A0A1B0GUT8 65 aa9.92□□□□□ -0.82
UBE2D4-209ENST00000454428 CT83Q5H943 113 aa9.92□□□□□ -0.82
UBE2D4-209ENST00000454428 KIR2DL4Q99706 377 aa9.92□□□□□ -0.82
UBE2D4-209ENST00000454428 HIGD1CA8MV81 97 aa9.91□□□□□ -0.82
UBE2D4-209ENST00000454428 TEX46H3BTG2 121 aa9.91□□□□□ -0.82
UBE2D4-209ENST00000454428 LINC00242Q5T6M2 205 aa9.9□□□□□ -0.82
UBE2D4-209ENST00000454428 TMEM18Q96B42 140 aa9.9□□□□□ -0.82
UBE2D4-209ENST00000454428 KRTAP4-1Q9BYQ7 146 aa9.9□□□□□ -0.82
UBE2D4-209ENST00000454428 BCE1O60756 84 aa9.89□□□□□ -0.83
UBE2D4-209ENST00000454428 RPL28P46779 137 aaKnown RBP9.89□□□□□ -0.83
UBE2D4-209ENST00000454428 MRPS36P82909 103 aaKnown RBP9.89□□□□□ -0.83
UBE2D4-209ENST00000454428 LINC00173Q6ZV60 143 aa9.89□□□□□ -0.83
UBE2D4-209ENST00000454428 LINC00304Q8N9R0 145 aa9.89□□□□□ -0.83
UBE2D4-209ENST00000454428 BORCS7Q96B45 105 aa9.89□□□□□ -0.83
UBE2D4-209ENST00000454428 IFITM10A6NMD0 228 aa9.88□□□□□ -0.83
UBE2D4-209ENST00000454428 LINC00469Q8N7U9 141 aa9.88□□□□□ -0.83
UBE2D4-209ENST00000454428 PPP1R17O96001 155 aa9.87□□□□□ -0.83
UBE2D4-209ENST00000454428 LINC01547P58512 204 aaPredicted RBP9.87□□□□□ -0.83
UBE2D4-209ENST00000454428 SPANXA1Q9NS26 97 aa9.87□□□□□ -0.83
UBE2D4-209ENST00000454428 PPP1R2P9O14990 202 aa9.86□□□□□ -0.83
UBE2D4-209ENST00000454428 HBBP68871 147 aa9.86□□□□□ -0.83
UBE2D4-209ENST00000454428 TGIF2-C20orf24A0A0A6YYL0 155 aa9.85□□□□□ -0.83
UBE2D4-209ENST00000454428 ZNF727A8MUV8 499 aa9.85□□□□□ -0.83
UBE2D4-209ENST00000454428 MRPL51Q4U2R6 128 aaKnown RBP9.85□□□□□ -0.83
UBE2D4-209ENST00000454428 LBHQ53QV2 105 aaPredicted RBP9.85□□□□□ -0.83
UBE2D4-209ENST00000454428 KRTAP13-1Q8IUC0 172 aa9.85□□□□□ -0.83
UBE2D4-209ENST00000454428 PACRGQ96M98 296 aaPredicted RBP9.85□□□□□ -0.83
UBE2D4-209ENST00000454428 PPDPFQ9H3Y8 114 aa9.85□□□□□ -0.83
UBE2D4-209ENST00000454428 XAGE1AQ9HD64 81 aa9.85□□□□□ -0.83
UBE2D4-209ENST00000454428 TAGLN2P37802 199 aaKnown RBP9.84□□□□□ -0.83
UBE2D4-209ENST00000454428 RPL32P62910 135 aaKnown RBP9.84□□□□□ -0.83
UBE2D4-209ENST00000454428 TRBV24-1A0A075B6N3 115 aa9.83□□□□□ -0.84
UBE2D4-209ENST00000454428 MRPL55Q7Z7F7 128 aaKnown RBP9.83□□□□□ -0.84
UBE2D4-209ENST00000454428 C20orf78Q9BR46 151 aa9.83□□□□□ -0.84
UBE2D4-209ENST00000454428 TP73-AS1Q9UF72 201 aa9.83□□□□□ -0.84
UBE2D4-209ENST00000454428 FAM229BQ4G0N7 80 aa9.82□□□□□ -0.84
UBE2D4-209ENST00000454428 FAM104BQ5XKR9 115 aa9.82□□□□□ -0.84
UBE2D4-209ENST00000454428 TMEM250H0YL14 139 aa9.81□□□□□ -0.84
UBE2D4-209ENST00000454428 SRSF3P84103 164 aaKnown RBP9.81□□□□□ -0.84
UBE2D4-209ENST00000454428 ASB16-AS1Q495Z4 193 aa9.81□□□□□ -0.84
UBE2D4-209ENST00000454428 RIGQ13278 110 aa9.8□□□□□ -0.84
UBE2D4-209ENST00000454428 LINC01551Q86U37 167 aa9.8□□□□□ -0.84
UBE2D4-209ENST00000454428 SMIM2Q9BVW6 85 aa9.8□□□□□ -0.84
UBE2D4-209ENST00000454428 RPL37AP8A6NKH3 93 aa9.79□□□□□ -0.84
UBE2D4-209ENST00000454428 TCAPO15273 167 aa9.79□□□□□ -0.84
UBE2D4-209ENST00000454428 CTAG1AP78358 180 aa9.79□□□□□ -0.84
UBE2D4-209ENST00000454428 LINC01561Q8N1V8 128 aa9.79□□□□□ -0.84
UBE2D4-209ENST00000454428 LINC00167Q96N53 147 aa9.79□□□□□ -0.84
UBE2D4-209ENST00000454428 V9GYV3 84 aa9.79□□□□□ -0.84
UBE2D4-209ENST00000454428 IGLV4-3A0A075B6K6 122 aa9.78□□□□□ -0.84
UBE2D4-209ENST00000454428 TNFRSF6BO95407 300 aa9.78□□□□□ -0.84
UBE2D4-209ENST00000454428 OSTCQ9NRP0 149 aa9.78□□□□□ -0.84
UBE2D4-209ENST00000454428 LINC00862A6NCI5 91 aa9.77□□□□□ -0.85
UBE2D4-209ENST00000454428 KRTAP13-3Q3SY46 172 aa9.76□□□□□ -0.85
UBE2D4-209ENST00000454428 LCE2CQ5TA81 110 aa9.76□□□□□ -0.85
UBE2D4-209ENST00000454428 IGKV2D-26A0A0A0MRZ7 120 aa9.75□□□□□ -0.85
UBE2D4-209ENST00000454428 CKS2P33552 79 aa9.75□□□□□ -0.85
UBE2D4-209ENST00000454428 CEBPGP53567 150 aa9.75□□□□□ -0.85
UBE2D4-209ENST00000454428 RGS21Q2M5E4 152 aa9.75□□□□□ -0.85
UBE2D4-209ENST00000454428 ZC2HC1BQ5TFG8 222 aa9.75□□□□□ -0.85
UBE2D4-209ENST00000454428 PYGO1Q9Y3Y4 419 aa9.75□□□□□ -0.85
UBE2D4-209ENST00000454428 NPYP01303 97 aa9.74□□□□□ -0.85
UBE2D4-209ENST00000454428 IFI27P40305 119 aaPredicted RBP9.74□□□□□ -0.85
UBE2D4-209ENST00000454428 CKS1BP61024 79 aa9.74□□□□□ -0.85
UBE2D4-209ENST00000454428 Q8IZM0 81 aa9.74□□□□□ -0.85
UBE2D4-209ENST00000454428 TOMM7Q9P0U1 55 aa9.74□□□□□ -0.85
UBE2D4-209ENST00000454428 GAGE10A6NGK3 116 aa9.73□□□□□ -0.85
UBE2D4-209ENST00000454428 D6R8Y8 96 aa9.73□□□□□ -0.85
UBE2D4-209ENST00000454428 C3orf22Q8N5N4 141 aa9.73□□□□□ -0.85
UBE2D4-209ENST00000454428 TMEM141Q96I45 108 aa9.73□□□□□ -0.85
UBE2D4-209ENST00000454428 SMIM7Q9BQ49 75 aa9.73□□□□□ -0.85
UBE2D4-209ENST00000454428 PRSS2P07478 247 aa9.72□□□□□ -0.85
UBE2D4-209ENST00000454428 UBE2AP49459 152 aa9.72□□□□□ -0.85
UBE2D4-209ENST00000454428 C6orf226Q5I0X4 101 aa9.72□□□□□ -0.85
UBE2D4-209ENST00000454428 Q6ZN92 141 aa9.72□□□□□ -0.85
UBE2D4-209ENST00000454428 EIF5A2Q9GZV4 153 aaKnown RBP9.72□□□□□ -0.85
UBE2D4-209ENST00000454428 NAT8BQ9UHF3 227 aa9.72□□□□□ -0.85
UBE2D4-209ENST00000454428 FP248Q71RG6 208 aaPredicted RBP9.71□□□□□ -0.86
UBE2D4-209ENST00000454428 PNRC1Q12796 327 aaPredicted RBP9.7□□□□□ -0.86
UBE2D4-209ENST00000454428 FAM74A3Q4VXF1 159 aa9.7□□□□□ -0.86
UBE2D4-209ENST00000454428 TEX43Q6ZNM6 134 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 141 ms