RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 IGHV1-58A0A0C4DH39 117 aa8.18□□□□□ -1.1
CHD3-206ENST00000452447 IGKV2-24A0A0C4DH68 120 aa8.18□□□□□ -1.1
CHD3-206ENST00000452447 A0A1B0GXF2 115 aa8.18□□□□□ -1.1
CHD3-206ENST00000452447 PYY3Q5JQD4 70 aa8.18□□□□□ -1.1
CHD3-206ENST00000452447 FAM104BQ5XKR9 115 aa8.18□□□□□ -1.1
CHD3-206ENST00000452447 NRACQ8N912 160 aa8.18□□□□□ -1.1
CHD3-206ENST00000452447 PRSS3P2Q8NHM4 247 aa8.18□□□□□ -1.1
CHD3-206ENST00000452447 HNRNPA3P51991 378 aaKnown RBP8.18□□□□□ -1.1
CHD3-206ENST00000452447 MAJINQ3KP22 176 aa8.18□□□□□ -1.1
CHD3-206ENST00000452447 MRPL51Q4U2R6 128 aaKnown RBP8.18□□□□□ -1.1
CHD3-206ENST00000452447 CD164L2Q6UWJ8 174 aa8.18□□□□□ -1.1
CHD3-206ENST00000452447 PLAC8Q9NZF1 115 aa8.18□□□□□ -1.1
CHD3-206ENST00000452447 PKIGQ9Y2B9 76 aa8.18□□□□□ -1.1
CHD3-206ENST00000452447 ZNF561-AS1K7EIQ3 104 aa8.17□□□□□ -1.1
CHD3-206ENST00000452447 LINC00614P0C842 121 aa8.17□□□□□ -1.1
CHD3-206ENST00000452447 CKS2P33552 79 aa8.17□□□□□ -1.1
CHD3-206ENST00000452447 SERTAD4-AS1Q5TG53 156 aa8.17□□□□□ -1.1
CHD3-206ENST00000452447 C7orf33Q8WU49 177 aa8.17□□□□□ -1.1
CHD3-206ENST00000452447 TMEM18Q96B42 140 aa8.17□□□□□ -1.1
CHD3-206ENST00000452447 CSDC2Q9Y534 153 aaKnown RBP8.17□□□□□ -1.1
CHD3-206ENST00000452447 TRAPPC1Q9Y5R8 145 aa8.17□□□□□ -1.1
CHD3-206ENST00000452447 PPBPP02775 128 aa8.16□□□□□ -1.1
CHD3-206ENST00000452447 MALP21145 153 aa8.16□□□□□ -1.1
CHD3-206ENST00000452447 PCP4P48539 62 aa8.16□□□□□ -1.1
CHD3-206ENST00000452447 YPEL4Q96NS1 127 aa8.16□□□□□ -1.1
CHD3-206ENST00000452447 C20orf78Q9BR46 151 aa8.16□□□□□ -1.1
CHD3-206ENST00000452447 UBE2D4Q9Y2X8 147 aa8.16□□□□□ -1.1
CHD3-206ENST00000452447 STPG4Q8N801 248 aa8.15□□□□□ -1.1
CHD3-206ENST00000452447 LINC00526Q96FQ7 95 aa8.15□□□□□ -1.1
CHD3-206ENST00000452447 CARD19Q96LW7 228 aa8.15□□□□□ -1.1
CHD3-206ENST00000452447 LINC00474Q9P2X8 69 aa8.15□□□□□ -1.1
CHD3-206ENST00000452447 RNASE13Q5GAN3 156 aaKnown RBP8.14□□□□□ -1.11
CHD3-206ENST00000452447 MRPL18Q9H0U6 180 aaKnown RBP8.14□□□□□ -1.11
CHD3-206ENST00000452447 LAMTOR2Q9Y2Q5 125 aa8.14□□□□□ -1.11
CHD3-206ENST00000452447 HMCN2Q8NDA2 5059 aa8.14□□□□□ -1.11
CHD3-206ENST00000452447 A0A096LNI7 61 aa8.14□□□□□ -1.11
CHD3-206ENST00000452447 TRAV13-1A0A0B4J241 112 aa8.14□□□□□ -1.11
CHD3-206ENST00000452447 COX7A2LO14548 114 aa8.14□□□□□ -1.11
CHD3-206ENST00000452447 PHOX2AO14813 284 aa8.14□□□□□ -1.11
CHD3-206ENST00000452447 SYCNQ0VAF6 134 aa8.14□□□□□ -1.11
CHD3-206ENST00000452447 TMEM136Q6ZRR5 245 aa8.14□□□□□ -1.11
CHD3-206ENST00000452447 Q6ZRU5 148 aa8.14□□□□□ -1.11
CHD3-206ENST00000452447 ORMDL3Q8N138 153 aa8.14□□□□□ -1.11
CHD3-206ENST00000452447 D6R8Y8 96 aa8.13□□□□□ -1.11
CHD3-206ENST00000452447 TNFRSF6BO95407 300 aa8.13□□□□□ -1.11
CHD3-206ENST00000452447 RPL32P62910 135 aaKnown RBP8.12□□□□□ -1.11
CHD3-206ENST00000452447 Q6ZUT4 128 aa8.12□□□□□ -1.11
CHD3-206ENST00000452447 TIMM21Q9BVV7 248 aa8.12□□□□□ -1.11
CHD3-206ENST00000452447 SMIM2Q9BVW6 85 aa8.11□□□□□ -1.11
CHD3-206ENST00000452447 IGLV4-69A0A075B6H9 119 aa8.1□□□□□ -1.11
CHD3-206ENST00000452447 IFITM10A6NMD0 228 aa8.1□□□□□ -1.11
CHD3-206ENST00000452447 APOMO95445 188 aa8.1□□□□□ -1.11
CHD3-206ENST00000452447 C5orf38Q86SI9 138 aa8.1□□□□□ -1.11
CHD3-206ENST00000452447 OR10D4PQ8NGN7 298 aa8.1□□□□□ -1.11
CHD3-206ENST00000452447 SVIPQ8NHG7 77 aa8.1□□□□□ -1.11
CHD3-206ENST00000452447 TNXBP22105 4242 aa8.1□□□□□ -1.11
CHD3-206ENST00000452447 NPYP01303 97 aa8.1□□□□□ -1.11
CHD3-206ENST00000452447 TRGC2P03986 189 aa8.1□□□□□ -1.11
CHD3-206ENST00000452447 RPL39P62891 51 aaKnown RBP8.1□□□□□ -1.11
CHD3-206ENST00000452447 JOSD1Q15040 202 aaPredicted RBP8.1□□□□□ -1.11
CHD3-206ENST00000452447 HIST3H2BBQ8N257 126 aa8.1□□□□□ -1.11
CHD3-206ENST00000452447 CAMK2N2Q96S95 79 aa8.1□□□□□ -1.11
CHD3-206ENST00000452447 LOC107984640A0A0U1RRK4 108 aa8.09□□□□□ -1.11
CHD3-206ENST00000452447 NDUFA6P56556 154 aa8.09□□□□□ -1.11
CHD3-206ENST00000452447 PRELID3AQ96N28 172 aa8.09□□□□□ -1.11
CHD3-206ENST00000452447 SPANXA1Q9NS26 97 aa8.09□□□□□ -1.11
CHD3-206ENST00000452447 DLEU1O43261 78 aa8.08□□□□□ -1.12
CHD3-206ENST00000452447 PRR3P79522 188 aaKnown RBP8.08□□□□□ -1.12
CHD3-206ENST00000452447 GAGE2BQ13066 116 aa8.08□□□□□ -1.12
CHD3-206ENST00000452447 MAP1LC3AQ9H492 121 aa8.08□□□□□ -1.12
CHD3-206ENST00000452447 M0R143 59 aa8.07□□□□□ -1.12
CHD3-206ENST00000452447 PTTG1IPP53801 180 aa8.07□□□□□ -1.12
CHD3-206ENST00000452447 C2orf48Q96LS8 159 aa8.07□□□□□ -1.12
CHD3-206ENST00000452447 PLA2G2DQ9UNK4 145 aa8.07□□□□□ -1.12
CHD3-206ENST00000452447 K7EMI3 77 aa8.06□□□□□ -1.12
CHD3-206ENST00000452447 MRPS36P82909 103 aaKnown RBP8.06□□□□□ -1.12
CHD3-206ENST00000452447 SPAG11BQ08648 103 aa8.06□□□□□ -1.12
CHD3-206ENST00000452447 OPRPNQ99935 248 aaPredicted RBP8.06□□□□□ -1.12
CHD3-206ENST00000452447 G0S2P27469 103 aa8.05□□□□□ -1.12
CHD3-206ENST00000452447 IFI27P40305 119 aaPredicted RBP8.05□□□□□ -1.12
CHD3-206ENST00000452447 KIAA1644Q3SXP7 199 aa8.05□□□□□ -1.12
CHD3-206ENST00000452447 ALKBH7Q9BT30 221 aaPredicted RBP8.05□□□□□ -1.12
CHD3-206ENST00000452447 NXT2Q9NPJ8 142 aaKnown RBP8.05□□□□□ -1.12
CHD3-206ENST00000452447 UBR4Q5T4S7 5183 aa8.05□□□□□ -1.12
CHD3-206ENST00000452447 HIST1H2BKO60814 126 aa8.05□□□□□ -1.12
CHD3-206ENST00000452447 HIST1H2BJP06899 126 aa8.05□□□□□ -1.12
CHD3-206ENST00000452447 MT1HL1P0DM35 61 aa8.05□□□□□ -1.12
CHD3-206ENST00000452447 HIST1H2BOP23527 126 aa8.05□□□□□ -1.12
CHD3-206ENST00000452447 HIST1H2BBP33778 126 aa8.05□□□□□ -1.12
CHD3-206ENST00000452447 HIST1H2BDP58876 126 aa8.05□□□□□ -1.12
CHD3-206ENST00000452447 HIST1H2BCP62807 126 aa8.05□□□□□ -1.12
CHD3-206ENST00000452447 HIST2H2BEQ16778 126 aa8.05□□□□□ -1.12
CHD3-206ENST00000452447 COA6Q5JTJ3 125 aaKnown RBP8.05□□□□□ -1.12
CHD3-206ENST00000452447 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.05□□□□□ -1.12
CHD3-206ENST00000452447 ORAOV1Q8WV07 137 aa8.05□□□□□ -1.12
CHD3-206ENST00000452447 HIST1H2BHQ93079 126 aa8.05□□□□□ -1.12
CHD3-206ENST00000452447 HIST1H2BNQ99877 126 aa8.05□□□□□ -1.12
CHD3-206ENST00000452447 HIST1H2BMQ99879 126 aa8.05□□□□□ -1.12
CHD3-206ENST00000452447 IGHV3OR16-9A0A0B4J2B5 98 aa8.04□□□□□ -1.12
CHD3-206ENST00000452447 RPL18AQ02543 176 aaKnown RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms