RNA–Protein interactions for RNA: ENST00000447507.1

SNHG3-203, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 185 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-203ENST00000447507 LINC01558Q9Y6Z2 57 aa-0.91□□□□□ -2.56
SNHG3-203ENST00000447507 SLIT1O75093 1534 aa-0.91□□□□□ -2.56
SNHG3-203ENST00000447507 COL4A6Q14031 1691 aa-0.91□□□□□ -2.56
SNHG3-203ENST00000447507 PATJQ8NI35 1801 aa-0.92□□□□□ -2.56
SNHG3-203ENST00000447507 IFT140Q96RY7 1462 aa-0.92□□□□□ -2.56
SNHG3-203ENST00000447507 PTPN23Q9H3S7 1636 aa-0.92□□□□□ -2.56
SNHG3-203ENST00000447507 H3BNG1 76 aa-0.92□□□□□ -2.56
SNHG3-203ENST00000447507 ARPC5O15511 151 aa-0.92□□□□□ -2.56
SNHG3-203ENST00000447507 IFNGP01579 166 aa-0.92□□□□□ -2.56
SNHG3-203ENST00000447507 FABP1P07148 127 aa-0.92□□□□□ -2.56
SNHG3-203ENST00000447507 HIST1H1AQ02539 215 aaPredicted RBP-0.92□□□□□ -2.56
SNHG3-203ENST00000447507 CTAGE3PQ8IX95 158 aa-0.92□□□□□ -2.56
SNHG3-203ENST00000447507 MAGOHBQ96A72 148 aaKnown RBP-0.92□□□□□ -2.56
SNHG3-203ENST00000447507 LINC01600Q96MT4 127 aa-0.92□□□□□ -2.56
SNHG3-203ENST00000447507 AQP10Q96PS8 301 aa-0.92□□□□□ -2.56
SNHG3-203ENST00000447507 GINS2Q9Y248 185 aa-0.92□□□□□ -2.56
SNHG3-203ENST00000447507 REV3LO60673 3130 aa-0.92□□□□□ -2.56
SNHG3-203ENST00000447507 ZNF518AQ6AHZ1 1483 aa-0.92□□□□□ -2.56
SNHG3-203ENST00000447507 MAGI1Q96QZ7 1491 aaPredicted RBP-0.92□□□□□ -2.56
SNHG3-203ENST00000447507 DOCK2Q92608 1830 aa-0.93□□□□□ -2.56
SNHG3-203ENST00000447507 SPEF2Q9C093 1822 aa-0.93□□□□□ -2.56
SNHG3-203ENST00000447507 HMGN4O00479 90 aa-0.93□□□□□ -2.56
SNHG3-203ENST00000447507 APOC3P02656 99 aa-0.93□□□□□ -2.56
SNHG3-203ENST00000447507 ALX1Q15699 326 aa-0.93□□□□□ -2.56
SNHG3-203ENST00000447507 KRTAP19-6Q3LI70 58 aa-0.93□□□□□ -2.56
SNHG3-203ENST00000447507 FDCSPQ8NFU4 85 aa-0.93□□□□□ -2.56
SNHG3-203ENST00000447507 SMIM3Q9BZL3 60 aa-0.93□□□□□ -2.56
SNHG3-203ENST00000447507 PPIP5K1Q6PFW1 1433 aa-0.93□□□□□ -2.56
SNHG3-203ENST00000447507 ARHGEF5Q12774 1597 aa-0.93□□□□□ -2.56
SNHG3-203ENST00000447507 ZZEF1O43149 2961 aa-0.94□□□□□ -2.56
SNHG3-203ENST00000447507 KALRNO60229 2985 aa-0.94□□□□□ -2.56
SNHG3-203ENST00000447507 SETBP1Q9Y6X0 1596 aa-0.94□□□□□ -2.56
SNHG3-203ENST00000447507 MYOM3Q5VTT5 1437 aa-0.94□□□□□ -2.56
SNHG3-203ENST00000447507 PRG4Q92954 1404 aaPredicted RBP-0.94□□□□□ -2.56
SNHG3-203ENST00000447507 SFT2D2O95562 160 aa-0.94□□□□□ -2.56
SNHG3-203ENST00000447507 TPPP2P59282 170 aa-0.94□□□□□ -2.56
SNHG3-203ENST00000447507 MORN2Q502X0 79 aa-0.94□□□□□ -2.56
SNHG3-203ENST00000447507 MMGT1Q8N4V1 131 aa-0.94□□□□□ -2.56
SNHG3-203ENST00000447507 Q8N8P6 123 aa-0.94□□□□□ -2.56
SNHG3-203ENST00000447507 TMEM263Q8WUH6 116 aaKnown RBP-0.94□□□□□ -2.56
SNHG3-203ENST00000447507 SKA2Q8WVK7 121 aaPredicted RBP-0.94□□□□□ -2.56
SNHG3-203ENST00000447507 MAFIPQ8WZ33 124 aa-0.94□□□□□ -2.56
SNHG3-203ENST00000447507 USMG5Q96IX5 58 aa-0.94□□□□□ -2.56
SNHG3-203ENST00000447507 SPRR4Q96PI1 79 aa-0.94□□□□□ -2.56
SNHG3-203ENST00000447507 RAPGEF6Q8TEU7 1601 aa-0.94□□□□□ -2.56
SNHG3-203ENST00000447507 NKTRP30414 1462 aaKnown RBP-0.94□□□□□ -2.56
SNHG3-203ENST00000447507 SHANK2Q9UPX8 1470 aa-0.94□□□□□ -2.56
SNHG3-203ENST00000447507 KNL1Q8NG31 2342 aa-0.94□□□□□ -2.56
SNHG3-203ENST00000447507 DYNC1H1Q14204 4646 aaKnown RBP-0.95□□□□□ -2.56
SNHG3-203ENST00000447507 MARF1Q9Y4F3 1742 aaKnown RBP-0.95□□□□□ -2.56
SNHG3-203ENST00000447507 TRBV7-3A0A075B6L6 115 aa-0.95□□□□□ -2.56
SNHG3-203ENST00000447507 TSTD3H0UI37 97 aa-0.95□□□□□ -2.56
SNHG3-203ENST00000447507 H0YGG7 62 aa-0.95□□□□□ -2.56
SNHG3-203ENST00000447507 IGLC1P0CG04 106 aa-0.95□□□□□ -2.56
SNHG3-203ENST00000447507 HIST1H1DP16402 221 aaKnown RBP-0.95□□□□□ -2.56
SNHG3-203ENST00000447507 UBE2D3P61077 147 aa-0.95□□□□□ -2.56
SNHG3-203ENST00000447507 UBE2D2P62837 147 aa-0.95□□□□□ -2.56
SNHG3-203ENST00000447507 UBA52P62987 128 aaKnown RBP-0.95□□□□□ -2.56
SNHG3-203ENST00000447507 CCDC153Q494R4 210 aa-0.95□□□□□ -2.56
SNHG3-203ENST00000447507 TAC4Q86UU9 113 aa-0.95□□□□□ -2.56
SNHG3-203ENST00000447507 LSM10Q969L4 123 aaKnown RBP-0.95□□□□□ -2.56
SNHG3-203ENST00000447507 DDA1Q9BW61 102 aa-0.95□□□□□ -2.56
SNHG3-203ENST00000447507 DYNLRB1Q9NP97 96 aa-0.95□□□□□ -2.56
SNHG3-203ENST00000447507 PSME4Q14997 1843 aa-0.95□□□□□ -2.56
SNHG3-203ENST00000447507 GCN1Q92616 2671 aaKnown RBP-0.95□□□□□ -2.56
SNHG3-203ENST00000447507 ANKRD30AQ9BXX3 1397 aa-0.96□□□□□ -2.56
SNHG3-203ENST00000447507 OVOS2A0A0J9YW53 1432 aa-0.96□□□□□ -2.56
SNHG3-203ENST00000447507 OVOS2Q6IE36 1432 aa-0.96□□□□□ -2.56
SNHG3-203ENST00000447507 RELNP78509 3460 aa-0.96□□□□□ -2.56
SNHG3-203ENST00000447507 A0A0C4DFX4 3053 aa-0.96□□□□□ -2.56
SNHG3-203ENST00000447507 TRIOO75962 3097 aa-0.96□□□□□ -2.56
SNHG3-203ENST00000447507 ACACBO00763 2458 aa-0.96□□□□□ -2.56
SNHG3-203ENST00000447507 TET3O43151 1660 aa-0.96□□□□□ -2.56
SNHG3-203ENST00000447507 ITPR2Q14571 2701 aa-0.96□□□□□ -2.56
SNHG3-203ENST00000447507 C1orf167Q5SNV9 1468 aa-0.96□□□□□ -2.56
SNHG3-203ENST00000447507 NLRP1Q9C000 1473 aa-0.96□□□□□ -2.56
SNHG3-203ENST00000447507 K7ERU9 68 aa-0.96□□□□□ -2.56
SNHG3-203ENST00000447507 TSPAN19P0C672 248 aa-0.96□□□□□ -2.56
SNHG3-203ENST00000447507 NBEAP1P0C6P0 100 aa-0.96□□□□□ -2.56
SNHG3-203ENST00000447507 FAM223AQ8IWN6 122 aa-0.96□□□□□ -2.56
SNHG3-203ENST00000447507 MGST2Q99735 147 aa-0.96□□□□□ -2.56
SNHG3-203ENST00000447507 CENPHQ9H3R5 247 aa-0.96□□□□□ -2.56
SNHG3-203ENST00000447507 HSPB11Q9Y547 144 aa-0.96□□□□□ -2.56
SNHG3-203ENST00000447507 MYOM1P52179 1685 aa-0.97□□□□□ -2.56
SNHG3-203ENST00000447507 SCN7AQ01118 1682 aa-0.97□□□□□ -2.56
SNHG3-203ENST00000447507 LOC100130705A0A1B0GUX0 176 aa-0.97□□□□□ -2.56
SNHG3-203ENST00000447507 MGPP08493 103 aa-0.97□□□□□ -2.56
SNHG3-203ENST00000447507 MRPL54Q6P161 138 aaKnown RBP-0.97□□□□□ -2.56
SNHG3-203ENST00000447507 SCIMPQ6UWF3 145 aa-0.97□□□□□ -2.56
SNHG3-203ENST00000447507 KCNRGQ8N5I3 272 aa-0.97□□□□□ -2.56
SNHG3-203ENST00000447507 LINC00474Q9P2X8 69 aa-0.97□□□□□ -2.56
SNHG3-203ENST00000447507 DNAH8Q96JB1 4490 aa-0.97□□□□□ -2.56
SNHG3-203ENST00000447507 FHAD1B1AJZ9 1412 aa-0.98□□□□□ -2.57
SNHG3-203ENST00000447507 CHKB-CPT1BH3BT56 60 aa-0.98□□□□□ -2.57
SNHG3-203ENST00000447507 M0R2Z0 102 aa-0.98□□□□□ -2.57
SNHG3-203ENST00000447507 SSSCA1O60232 199 aa-0.98□□□□□ -2.57
SNHG3-203ENST00000447507 DBIP07108 87 aaKnown RBP-0.98□□□□□ -2.57
SNHG3-203ENST00000447507 NEFHP12036 1026 aa-0.98□□□□□ -2.57
SNHG3-203ENST00000447507 DEFA5Q01523 94 aa-0.98□□□□□ -2.57
SNHG3-203ENST00000447507 HEPN1Q6WQI6 88 aa-0.98□□□□□ -2.57
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms