RNA–Protein interactions for RNA: ENST00000444987.1

LRRC42-204, Transcript of leucine rich repeat containing 42, humanhuman

TSL 5

Gene LRRC42, Length 1,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42-204ENST00000444987 APOC3P02656 99 aa12.08□□□□□ -0.48
LRRC42-204ENST00000444987 SYCNQ0VAF6 134 aa12.08□□□□□ -0.48
LRRC42-204ENST00000444987 PAPPA-AS1Q5QFB9 102 aa12.08□□□□□ -0.48
LRRC42-204ENST00000444987 Q6ZN92 141 aa12.08□□□□□ -0.48
LRRC42-204ENST00000444987 TEX43Q6ZNM6 134 aa12.08□□□□□ -0.48
LRRC42-204ENST00000444987 OR10D4PQ8NGN7 298 aa12.08□□□□□ -0.48
LRRC42-204ENST00000444987 SPACA4Q8TDM5 124 aa12.08□□□□□ -0.48
LRRC42-204ENST00000444987 C2orf48Q96LS8 159 aa12.08□□□□□ -0.48
LRRC42-204ENST00000444987 CARD19Q96LW7 228 aa12.08□□□□□ -0.48
LRRC42-204ENST00000444987 ALKBH7Q9BT30 221 aaPredicted RBP12.08□□□□□ -0.48
LRRC42-204ENST00000444987 F8WDY8 70 aa12.07□□□□□ -0.48
LRRC42-204ENST00000444987 PANO1I0J062 215 aa12.07□□□□□ -0.48
LRRC42-204ENST00000444987 COX6A2Q02221 97 aa12.07□□□□□ -0.48
LRRC42-204ENST00000444987 C5orf38Q86SI9 138 aa12.07□□□□□ -0.48
LRRC42-204ENST00000444987 C2orf88Q9BSF0 95 aa12.07□□□□□ -0.48
LRRC42-204ENST00000444987 LINC00474Q9P2X8 69 aa12.07□□□□□ -0.48
LRRC42-204ENST00000444987 IGLV4-69A0A075B6H9 119 aa12.06□□□□□ -0.48
LRRC42-204ENST00000444987 IGIPA6NJ69 53 aa12.06□□□□□ -0.48
LRRC42-204ENST00000444987 PRSS3P2Q8NHM4 247 aa12.06□□□□□ -0.48
LRRC42-204ENST00000444987 MRPL18Q9H0U6 180 aaKnown RBP12.06□□□□□ -0.48
LRRC42-204ENST00000444987 TGIF2-C20orf24A0A0A6YYL0 155 aa12.05□□□□□ -0.48
LRRC42-204ENST00000444987 LINC01546A6NGU7 62 aa12.05□□□□□ -0.48
LRRC42-204ENST00000444987 TOMM6Q96B49 74 aa12.05□□□□□ -0.48
LRRC42-204ENST00000444987 DPH3Q96FX2 82 aa12.05□□□□□ -0.48
LRRC42-204ENST00000444987 AMELXQ99217 191 aa12.05□□□□□ -0.48
LRRC42-204ENST00000444987 TIMM17AQ99595 171 aa12.05□□□□□ -0.48
LRRC42-204ENST00000444987 VCX2Q9H322 139 aa12.05□□□□□ -0.48
LRRC42-204ENST00000444987 FABP9Q0Z7S8 132 aa12.04□□□□□ -0.48
LRRC42-204ENST00000444987 LINC00526Q96FQ7 95 aa12.04□□□□□ -0.48
LRRC42-204ENST00000444987 PLAC8Q9NZF1 115 aa12.04□□□□□ -0.48
LRRC42-204ENST00000444987 A0A087WYN8 130 aa12.03□□□□□ -0.48
LRRC42-204ENST00000444987 UBE2D1P51668 147 aa12.03□□□□□ -0.48
LRRC42-204ENST00000444987 SPAG11BQ08648 103 aa12.03□□□□□ -0.48
LRRC42-204ENST00000444987 LINC00242Q5T6M2 205 aa12.03□□□□□ -0.48
LRRC42-204ENST00000444987 FAM19A3Q7Z5A8 133 aa12.03□□□□□ -0.48
LRRC42-204ENST00000444987 LINC01561Q8N1V8 128 aa12.03□□□□□ -0.48
LRRC42-204ENST00000444987 CAMK2N2Q96S95 79 aa12.03□□□□□ -0.48
LRRC42-204ENST00000444987 A0A087WZ39 114 aa12.02□□□□□ -0.49
LRRC42-204ENST00000444987 CHTF8P0CG12 524 aa12.02□□□□□ -0.49
LRRC42-204ENST00000444987 RNF151Q2KHN1 245 aa12.02□□□□□ -0.49
LRRC42-204ENST00000444987 ERASQ7Z444 233 aa12.02□□□□□ -0.49
LRRC42-204ENST00000444987 FAT1Q14517 4588 aa12.01□□□□□ -0.49
LRRC42-204ENST00000444987 KRTAP10-4P60372 401 aaPredicted RBP12.01□□□□□ -0.49
LRRC42-204ENST00000444987 SEC11AP67812 179 aa12.01□□□□□ -0.49
LRRC42-204ENST00000444987 LINC00173Q6ZV60 143 aa12.01□□□□□ -0.49
LRRC42-204ENST00000444987 ORAOV1Q8WV07 137 aa12.01□□□□□ -0.49
LRRC42-204ENST00000444987 LOC107984640A0A0U1RRK4 108 aa12□□□□□ -0.49
LRRC42-204ENST00000444987 RPL37AP61513 92 aaKnown RBP12□□□□□ -0.49
LRRC42-204ENST00000444987 Q6ZRU5 148 aa12□□□□□ -0.49
LRRC42-204ENST00000444987 TRAPPC1Q9Y5R8 145 aa12□□□□□ -0.49
LRRC42-204ENST00000444987 SRRM2Q9UQ35 2752 aaKnown RBP12□□□□□ -0.49
LRRC42-204ENST00000444987 A0A096LNI7 61 aa11.99□□□□□ -0.49
LRRC42-204ENST00000444987 MAJINQ3KP22 176 aa11.99□□□□□ -0.49
LRRC42-204ENST00000444987 FA2HQ7L5A8 372 aa11.99□□□□□ -0.49
LRRC42-204ENST00000444987 VPS13BQ7Z7G8 4022 aa11.99□□□□□ -0.49
LRRC42-204ENST00000444987 IGKV2-24A0A0C4DH68 120 aa11.98□□□□□ -0.49
LRRC42-204ENST00000444987 SCGB3A1Q96QR1 104 aa11.98□□□□□ -0.49
LRRC42-204ENST00000444987 SMCO4Q9NRQ5 59 aa11.98□□□□□ -0.49
LRRC42-204ENST00000444987 MRPL35Q9NZE8 188 aaKnown RBP11.98□□□□□ -0.49
LRRC42-204ENST00000444987 NDUFA1O15239 70 aa11.97□□□□□ -0.49
LRRC42-204ENST00000444987 STPG4Q8N801 248 aa11.97□□□□□ -0.49
LRRC42-204ENST00000444987 HERVK_113P63121 156 aa11.96□□□□□ -0.49
LRRC42-204ENST00000444987 C7orf33Q8WU49 177 aa11.96□□□□□ -0.49
LRRC42-204ENST00000444987 PTTG1IPP53801 180 aa11.95□□□□□ -0.5
LRRC42-204ENST00000444987 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.93□□□□□ -0.5
LRRC42-204ENST00000444987 KIAA0087Q14695 138 aa11.93□□□□□ -0.5
LRRC42-204ENST00000444987 ZC2HC1BQ5TFG8 222 aa11.93□□□□□ -0.5
LRRC42-204ENST00000444987 SLC7A5P1Q8MH63 180 aa11.93□□□□□ -0.5
LRRC42-204ENST00000444987 C18orf32Q8TCD1 76 aa11.93□□□□□ -0.5
LRRC42-204ENST00000444987 YPEL4Q96NS1 127 aa11.93□□□□□ -0.5
LRRC42-204ENST00000444987 LINC00614P0C842 121 aa11.92□□□□□ -0.5
LRRC42-204ENST00000444987 TLX1NBP0CAT3 122 aa11.92□□□□□ -0.5
LRRC42-204ENST00000444987 RAB5BP61020 215 aa11.92□□□□□ -0.5
LRRC42-204ENST00000444987 GEMIN7Q9H840 131 aaKnown RBP11.92□□□□□ -0.5
LRRC42-204ENST00000444987 GAGE2BQ13066 116 aa11.91□□□□□ -0.5
LRRC42-204ENST00000444987 TRBV30A0A0K0K1B3 111 aa11.9□□□□□ -0.5
LRRC42-204ENST00000444987 TINCRA0A1B0GVN0 87 aa11.89□□□□□ -0.51
LRRC42-204ENST00000444987 KRTAP29-1A8MX34 341 aaPredicted RBP11.89□□□□□ -0.51
LRRC42-204ENST00000444987 PRSS2P07478 247 aa11.89□□□□□ -0.51
LRRC42-204ENST00000444987 PMVKQ15126 192 aa11.89□□□□□ -0.51
LRRC42-204ENST00000444987 UNQ6190/PRO20217Q6UXQ8 127 aa11.89□□□□□ -0.51
LRRC42-204ENST00000444987 Q8IZM0 81 aa11.89□□□□□ -0.51
LRRC42-204ENST00000444987 RPL18AQ02543 176 aaKnown RBP11.88□□□□□ -0.51
LRRC42-204ENST00000444987 PACRGQ96M98 296 aaPredicted RBP11.88□□□□□ -0.51
LRRC42-204ENST00000444987 CST9LQ9H4G1 147 aa11.88□□□□□ -0.51
LRRC42-204ENST00000444987 C6orf48Q9UBA6 75 aa11.88□□□□□ -0.51
LRRC42-204ENST00000444987 CDKN2A-AS1Q9UH64 79 aa11.88□□□□□ -0.51
LRRC42-204ENST00000444987 IGLV5-45A0A087WSX0 123 aa11.87□□□□□ -0.51
LRRC42-204ENST00000444987 A0A0J9YXV3 536 aa11.87□□□□□ -0.51
LRRC42-204ENST00000444987 HBDP02042 147 aa11.87□□□□□ -0.51
LRRC42-204ENST00000444987 C10orf25Q5T742 122 aa11.87□□□□□ -0.51
LRRC42-204ENST00000444987 URB1-AS1Q96HZ7 61 aa11.87□□□□□ -0.51
LRRC42-204ENST00000444987 FLG2Q5D862 2391 aaPredicted RBP11.86□□□□□ -0.51
LRRC42-204ENST00000444987 OXTP01178 125 aa11.86□□□□□ -0.51
LRRC42-204ENST00000444987 C6orf226Q5I0X4 101 aa11.86□□□□□ -0.51
LRRC42-204ENST00000444987 A0A096LNJ9 63 aa11.85□□□□□ -0.51
LRRC42-204ENST00000444987 CKS1BP61024 79 aa11.85□□□□□ -0.51
LRRC42-204ENST00000444987 CXCL5P42830 114 aa11.84□□□□□ -0.51
LRRC42-204ENST00000444987 PDZD11Q5EBL8 140 aa11.84□□□□□ -0.51
LRRC42-204ENST00000444987 LINC00469Q8N7U9 141 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms