RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 C2orf88Q9BSF0 95 aa8.03□□□□□ -1.12
USP1-203ENST00000442679 HERC2O95714 4834 aa8.03□□□□□ -1.12
USP1-203ENST00000442679 IGHV1-58A0A0C4DH39 117 aa8.02□□□□□ -1.13
USP1-203ENST00000442679 MALP21145 153 aa8.02□□□□□ -1.13
USP1-203ENST00000442679 LINC01620Q4KN68 170 aa8.02□□□□□ -1.13
USP1-203ENST00000442679 HIGD2BQ4VC39 106 aa8.02□□□□□ -1.13
USP1-203ENST00000442679 C5orf38Q86SI9 138 aa8.02□□□□□ -1.13
USP1-203ENST00000442679 GVQW2A0A096LPI5 108 aaPredicted RBP8.01□□□□□ -1.13
USP1-203ENST00000442679 CDK2AP2O75956 126 aa8.01□□□□□ -1.13
USP1-203ENST00000442679 UBE2D1P51668 147 aa8.01□□□□□ -1.13
USP1-203ENST00000442679 LINC00173Q6ZV60 143 aa8.01□□□□□ -1.13
USP1-203ENST00000442679 SLPIP03973 132 aa8□□□□□ -1.13
USP1-203ENST00000442679 CNBPP62633 177 aaKnown RBP8□□□□□ -1.13
USP1-203ENST00000442679 PMCHL1Q16048 86 aa8□□□□□ -1.13
USP1-203ENST00000442679 LINC00242Q5T6M2 205 aa8□□□□□ -1.13
USP1-203ENST00000442679 BAGE3Q86Y29 109 aa8□□□□□ -1.13
USP1-203ENST00000442679 HSPG2P98160 4391 aa7.99□□□□□ -1.13
USP1-203ENST00000442679 A0A096LNJ9 63 aa7.99□□□□□ -1.13
USP1-203ENST00000442679 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.99□□□□□ -1.13
USP1-203ENST00000442679 IGHV3OR16-9A0A0B4J2B5 98 aa7.99□□□□□ -1.13
USP1-203ENST00000442679 HBDP02042 147 aa7.99□□□□□ -1.13
USP1-203ENST00000442679 COX6A2Q02221 97 aa7.99□□□□□ -1.13
USP1-203ENST00000442679 LCE2CQ5TA81 110 aa7.99□□□□□ -1.13
USP1-203ENST00000442679 C9orf163Q8N9P6 203 aa7.99□□□□□ -1.13
USP1-203ENST00000442679 CHCHD1Q96BP2 118 aaKnown RBP7.99□□□□□ -1.13
USP1-203ENST00000442679 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.98□□□□□ -1.13
USP1-203ENST00000442679 ZNF561-AS1K7EIQ3 104 aa7.98□□□□□ -1.13
USP1-203ENST00000442679 APOMO95445 188 aa7.98□□□□□ -1.13
USP1-203ENST00000442679 LINC00526Q96FQ7 95 aa7.98□□□□□ -1.13
USP1-203ENST00000442679 S100A1P23297 94 aa7.97□□□□□ -1.13
USP1-203ENST00000442679 XGP55808 180 aa7.97□□□□□ -1.13
USP1-203ENST00000442679 PDZD11Q5EBL8 140 aa7.97□□□□□ -1.13
USP1-203ENST00000442679 FAM19A3Q7Z5A8 133 aa7.97□□□□□ -1.13
USP1-203ENST00000442679 CST9LQ9H4G1 147 aa7.97□□□□□ -1.13
USP1-203ENST00000442679 FAM30AQ9NZY2 134 aa7.97□□□□□ -1.13
USP1-203ENST00000442679 IGHV3-64A0A075B6Q5 118 aa7.96□□□□□ -1.14
USP1-203ENST00000442679 A0A087WZ39 114 aa7.96□□□□□ -1.14
USP1-203ENST00000442679 A0A0J9YXV3 536 aa7.96□□□□□ -1.14
USP1-203ENST00000442679 SEC11AP67812 179 aa7.96□□□□□ -1.14
USP1-203ENST00000442679 PMVKQ15126 192 aa7.96□□□□□ -1.14
USP1-203ENST00000442679 IGLV4-69A0A075B6H9 119 aa7.95□□□□□ -1.14
USP1-203ENST00000442679 ATP6V1G1O75348 118 aa7.95□□□□□ -1.14
USP1-203ENST00000442679 ATP5LO75964 103 aa7.95□□□□□ -1.14
USP1-203ENST00000442679 NDUFA6P56556 154 aa7.95□□□□□ -1.14
USP1-203ENST00000442679 HERVK_113P63121 156 aa7.95□□□□□ -1.14
USP1-203ENST00000442679 SDIM1Q6ZPB5 146 aa7.95□□□□□ -1.14
USP1-203ENST00000442679 Q6ZSA8 131 aa7.95□□□□□ -1.14
USP1-203ENST00000442679 OR10D4PQ8NGN7 298 aa7.95□□□□□ -1.14
USP1-203ENST00000442679 ORAOV1Q8WV07 137 aa7.95□□□□□ -1.14
USP1-203ENST00000442679 GEMIN7Q9H840 131 aaKnown RBP7.95□□□□□ -1.14
USP1-203ENST00000442679 HSBP1O75506 76 aa7.94□□□□□ -1.14
USP1-203ENST00000442679 HAMPP81172 84 aa7.94□□□□□ -1.14
USP1-203ENST00000442679 SPAG11BQ08648 103 aa7.94□□□□□ -1.14
USP1-203ENST00000442679 SYCNQ0VAF6 134 aa7.94□□□□□ -1.14
USP1-203ENST00000442679 LINC01561Q8N1V8 128 aa7.94□□□□□ -1.14
USP1-203ENST00000442679 TINCRA0A1B0GVN0 87 aa7.93□□□□□ -1.14
USP1-203ENST00000442679 SERF1AO75920 110 aa7.93□□□□□ -1.14
USP1-203ENST00000442679 FAM19A2Q8N3H0 131 aa7.93□□□□□ -1.14
USP1-203ENST00000442679 C2orf48Q96LS8 159 aa7.93□□□□□ -1.14
USP1-203ENST00000442679 CARD19Q96LW7 228 aa7.93□□□□□ -1.14
USP1-203ENST00000442679 CAMK2N2Q96S95 79 aa7.93□□□□□ -1.14
USP1-203ENST00000442679 CDKN2A-AS1Q9UH64 79 aa7.93□□□□□ -1.14
USP1-203ENST00000442679 LINC00310P59036 64 aa7.92□□□□□ -1.14
USP1-203ENST00000442679 LINC00469Q8N7U9 141 aa7.92□□□□□ -1.14
USP1-203ENST00000442679 NUPR1O60356 82 aa7.91□□□□□ -1.14
USP1-203ENST00000442679 HIST1H2BKO60814 126 aa7.91□□□□□ -1.14
USP1-203ENST00000442679 HIST1H2BJP06899 126 aa7.91□□□□□ -1.14
USP1-203ENST00000442679 HIST1H2BOP23527 126 aa7.91□□□□□ -1.14
USP1-203ENST00000442679 HIST1H2BBP33778 126 aa7.91□□□□□ -1.14
USP1-203ENST00000442679 HIST1H2BDP58876 126 aa7.91□□□□□ -1.14
USP1-203ENST00000442679 HIST1H2BCP62807 126 aa7.91□□□□□ -1.14
USP1-203ENST00000442679 HIST2H2BEQ16778 126 aa7.91□□□□□ -1.14
USP1-203ENST00000442679 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.91□□□□□ -1.14
USP1-203ENST00000442679 Q6ZRU5 148 aa7.91□□□□□ -1.14
USP1-203ENST00000442679 HIST1H2BHQ93079 126 aa7.91□□□□□ -1.14
USP1-203ENST00000442679 HIST1H2BNQ99877 126 aa7.91□□□□□ -1.14
USP1-203ENST00000442679 HIST1H2BMQ99879 126 aa7.91□□□□□ -1.14
USP1-203ENST00000442679 CHAC1Q9BUX1 264 aa7.91□□□□□ -1.14
USP1-203ENST00000442679 F8WDY8 70 aa7.9□□□□□ -1.14
USP1-203ENST00000442679 KIAA0087Q14695 138 aa7.9□□□□□ -1.14
USP1-203ENST00000442679 IFI27L1Q96BM0 104 aa7.9□□□□□ -1.14
USP1-203ENST00000442679 DPH3Q96FX2 82 aa7.9□□□□□ -1.14
USP1-203ENST00000442679 PACRGQ96M98 296 aaPredicted RBP7.9□□□□□ -1.14
USP1-203ENST00000442679 IGLV5-45A0A087WSX0 123 aa7.89□□□□□ -1.15
USP1-203ENST00000442679 PANO1I0J062 215 aa7.89□□□□□ -1.15
USP1-203ENST00000442679 SMR3BP02814 79 aaPredicted RBP7.89□□□□□ -1.15
USP1-203ENST00000442679 PRSS2P07478 247 aa7.89□□□□□ -1.15
USP1-203ENST00000442679 IGLC3P0DOY3 106 aa7.89□□□□□ -1.15
USP1-203ENST00000442679 SCXQ7RTU7 201 aa7.89□□□□□ -1.15
USP1-203ENST00000442679 KRTAP17-1Q9BYP8 105 aa7.89□□□□□ -1.15
USP1-203ENST00000442679 TOMM7Q9P0U1 55 aa7.89□□□□□ -1.15
USP1-203ENST00000442679 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.89□□□□□ -1.15
USP1-203ENST00000442679 VPS13BQ7Z7G8 4022 aa7.88□□□□□ -1.15
USP1-203ENST00000442679 FAT1Q14517 4588 aa7.88□□□□□ -1.15
USP1-203ENST00000442679 NDUFA1O15239 70 aa7.88□□□□□ -1.15
USP1-203ENST00000442679 LEPROTL1O95214 131 aa7.88□□□□□ -1.15
USP1-203ENST00000442679 CHTF8P0CG12 524 aa7.88□□□□□ -1.15
USP1-203ENST00000442679 RNF151Q2KHN1 245 aa7.88□□□□□ -1.15
USP1-203ENST00000442679 C6orf226Q5I0X4 101 aa7.88□□□□□ -1.15
USP1-203ENST00000442679 UNQ6190/PRO20217Q6UXQ8 127 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms