RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 DSCR9P59020 149 aa14.54□□□□□ -0.08
SHOX2-203ENST00000441443 ZNF415Q09FC8 603 aa14.54□□□□□ -0.08
SHOX2-203ENST00000441443 C9orf129Q5T035 196 aaKnown RBP14.54□□□□□ -0.08
SHOX2-203ENST00000441443 hADV29S1A0JD25 119 aa14.54□□□□□ -0.08
SHOX2-203ENST00000441443 MALP21145 153 aa14.54□□□□□ -0.08
SHOX2-203ENST00000441443 CYSTM1Q9H1C7 97 aa14.54□□□□□ -0.08
SHOX2-203ENST00000441443 ATP5G1P05496 136 aa14.53□□□□□ -0.08
SHOX2-203ENST00000441443 INAFM2P0DMQ5 153 aa14.53□□□□□ -0.08
SHOX2-203ENST00000441443 IGKV3D-7A0A0C4DH55 119 aa14.52□□□□□ -0.09
SHOX2-203ENST00000441443 RNF152Q8N8N0 203 aa14.52□□□□□ -0.09
SHOX2-203ENST00000441443 COPS9Q8WXC6 57 aa14.52□□□□□ -0.09
SHOX2-203ENST00000441443 ZNF469Q96JG9 3925 aaPredicted RBP14.51□□□□□ -0.09
SHOX2-203ENST00000441443 HIST2H2BCQ6DN03 193 aa14.51□□□□□ -0.09
SHOX2-203ENST00000441443 C18orf65Q6ZTR6 163 aa14.51□□□□□ -0.09
SHOX2-203ENST00000441443 FAM19A5Q7Z5A7 132 aaPredicted RBP14.51□□□□□ -0.09
SHOX2-203ENST00000441443 C14orf132Q9NPU4 83 aa14.51□□□□□ -0.09
SHOX2-203ENST00000441443 FAM222AQ5U5X8 452 aa14.5□□□□□ -0.09
SHOX2-203ENST00000441443 NIPBLQ6KC79 2804 aaeCLIP14.5□□□□□ -0.09
SHOX2-203ENST00000441443 J3KT08 172 aa14.5□□□□□ -0.09
SHOX2-203ENST00000441443 NBPF19A0A087WUL8 3843 aa14.49□□□□□ -0.09
SHOX2-203ENST00000441443 ZNF843Q8N446 348 aa14.49□□□□□ -0.09
SHOX2-203ENST00000441443 A0A087WYN8 130 aa14.48□□□□□ -0.09
SHOX2-203ENST00000441443 DNAL4O96015 105 aa14.48□□□□□ -0.09
SHOX2-203ENST00000441443 LINC00337Q8N6G1 96 aa14.48□□□□□ -0.09
SHOX2-203ENST00000441443 C11orf72Q8NBR9 251 aa14.48□□□□□ -0.09
SHOX2-203ENST00000441443 ITPR2Q14571 2701 aa14.48□□□□□ -0.09
SHOX2-203ENST00000441443 A0A096LNT2 108 aa14.48□□□□□ -0.09
SHOX2-203ENST00000441443 CRYGAP11844 174 aa14.47□□□□□ -0.09
SHOX2-203ENST00000441443 A0A087WVE0 104 aa14.47□□□□□ -0.09
SHOX2-203ENST00000441443 ATOX1O00244 68 aa14.47□□□□□ -0.09
SHOX2-203ENST00000441443 IGHV4-31P0DP07 118 aa14.47□□□□□ -0.09
SHOX2-203ENST00000441443 HIST1H4AP62805 103 aaKnown RBP14.47□□□□□ -0.09
SHOX2-203ENST00000441443 Q96MF0 132 aa14.47□□□□□ -0.09
SHOX2-203ENST00000441443 HELZ2Q9BYK8 2649 aaKnown RBP14.47□□□□□ -0.09
SHOX2-203ENST00000441443 CRPP02741 224 aa14.47□□□□□ -0.09
SHOX2-203ENST00000441443 C11orf44Q8N8P7 122 aa14.47□□□□□ -0.09
SHOX2-203ENST00000441443 F5H768 121 aa14.46□□□□□ -0.09
SHOX2-203ENST00000441443 LRRC75A-AS1Q8N1F1 130 aa14.46□□□□□ -0.09
SHOX2-203ENST00000441443 A0A1B0GX51 115 aa14.46□□□□□ -0.1
SHOX2-203ENST00000441443 SLURP1P55000 103 aa14.46□□□□□ -0.1
SHOX2-203ENST00000441443 RPL28P46779 137 aaKnown RBP14.45□□□□□ -0.1
SHOX2-203ENST00000441443 MIR7-3HGQ8N6C7 128 aa14.45□□□□□ -0.1
SHOX2-203ENST00000441443 TMEM89A2RUT3 159 aa14.44□□□□□ -0.1
SHOX2-203ENST00000441443 NTM-AS1Q6ZSK4 140 aa14.44□□□□□ -0.1
SHOX2-203ENST00000441443 IGKV2-28A0A075B6P5 120 aa14.44□□□□□ -0.1
SHOX2-203ENST00000441443 TRAV13-2A0A0B4J235 113 aa14.44□□□□□ -0.1
SHOX2-203ENST00000441443 IGKV2D-28P01615 120 aa14.44□□□□□ -0.1
SHOX2-203ENST00000441443 LINC00846Q9NV44 126 aa14.44□□□□□ -0.1
SHOX2-203ENST00000441443 ZNF702PQ9H963 129 aa14.44□□□□□ -0.1
SHOX2-203ENST00000441443 CR1P17927 2039 aa14.43□□□□□ -0.1
SHOX2-203ENST00000441443 RPL18AQ02543 176 aaKnown RBP14.43□□□□□ -0.1
SHOX2-203ENST00000441443 TOMM7Q9P0U1 55 aa14.43□□□□□ -0.1
SHOX2-203ENST00000441443 KIR2DL5BQ8NHK3 375 aa14.43□□□□□ -0.1
SHOX2-203ENST00000441443 SMIM11BQ8TCY0 68 aa14.43□□□□□ -0.1
SHOX2-203ENST00000441443 SND1-IT1Q9HBX3 110 aa14.43□□□□□ -0.1
SHOX2-203ENST00000441443 SMIM9A6NGZ8 99 aa14.42□□□□□ -0.1
SHOX2-203ENST00000441443 J3QLI3 93 aa14.42□□□□□ -0.1
SHOX2-203ENST00000441443 Q6YL49 198 aa14.41□□□□□ -0.1
SHOX2-203ENST00000441443 TENM4Q6N022 2769 aa14.41□□□□□ -0.1
SHOX2-203ENST00000441443 CDC42SE2Q9NRR3 84 aa14.41□□□□□ -0.1
SHOX2-203ENST00000441443 TRGV1A0A0A0MS02 117 aa14.4□□□□□ -0.1
SHOX2-203ENST00000441443 DEFB113Q30KQ7 82 aa14.4□□□□□ -0.1
SHOX2-203ENST00000441443 XCL2Q9UBD3 114 aa14.4□□□□□ -0.1
SHOX2-203ENST00000441443 IGKV3OR2-268A0A0C4DH90 116 aa14.4□□□□□ -0.1
SHOX2-203ENST00000441443 NCR3O14931 201 aa14.4□□□□□ -0.1
SHOX2-203ENST00000441443 SLPIP03973 132 aa14.39□□□□□ -0.11
SHOX2-203ENST00000441443 C5orf47Q569G3 176 aa14.39□□□□□ -0.11
SHOX2-203ENST00000441443 FAM19A3Q7Z5A8 133 aa14.39□□□□□ -0.11
SHOX2-203ENST00000441443 LECT2O14960 151 aa14.38□□□□□ -0.11
SHOX2-203ENST00000441443 PF4P02776 101 aa14.38□□□□□ -0.11
SHOX2-203ENST00000441443 LINC00158P58513 81 aa14.38□□□□□ -0.11
SHOX2-203ENST00000441443 A8MTW9 85 aa14.37□□□□□ -0.11
SHOX2-203ENST00000441443 UBE2E2Q96LR5 201 aa14.37□□□□□ -0.11
SHOX2-203ENST00000441443 A0A1W2PRX2 142 aa14.37□□□□□ -0.11
SHOX2-203ENST00000441443 RPL36AP83881 106 aaKnown RBP14.37□□□□□ -0.11
SHOX2-203ENST00000441443 RPL36ALQ969Q0 106 aaKnown RBP14.37□□□□□ -0.11
SHOX2-203ENST00000441443 LINC01561Q8N1V8 128 aa14.36□□□□□ -0.11
SHOX2-203ENST00000441443 MAP6D1Q9H9H5 199 aa14.36□□□□□ -0.11
SHOX2-203ENST00000441443 INSP01308 110 aa14.36□□□□□ -0.11
SHOX2-203ENST00000441443 SERP2Q8N6R1 65 aa14.35□□□□□ -0.11
SHOX2-203ENST00000441443 DSCR8Q96T75 97 aa14.35□□□□□ -0.11
SHOX2-203ENST00000441443 FASNP49327 2511 aaKnown RBP14.35□□□□□ -0.11
SHOX2-203ENST00000441443 HECTD1Q9ULT8 2610 aa14.35□□□□□ -0.11
SHOX2-203ENST00000441443 HIVEP2P31629 2446 aa14.35□□□□□ -0.11
SHOX2-203ENST00000441443 Q6JHZ5 121 aa14.35□□□□□ -0.11
SHOX2-203ENST00000441443 COX7B2Q8TF08 81 aa14.35□□□□□ -0.11
SHOX2-203ENST00000441443 WFDC11Q8NEX6 87 aa14.34□□□□□ -0.11
SHOX2-203ENST00000441443 FN1P02751 2386 aaKnown RBP14.34□□□□□ -0.11
SHOX2-203ENST00000441443 USP17L23D6RBM5 183 aa14.33□□□□□ -0.11
SHOX2-203ENST00000441443 PFN2P35080 140 aa14.33□□□□□ -0.11
SHOX2-203ENST00000441443 CCL18P55774 89 aa14.33□□□□□ -0.11
SHOX2-203ENST00000441443 RPS28P62857 69 aaKnown RBP14.33□□□□□ -0.11
SHOX2-203ENST00000441443 DPH3Q96FX2 82 aa14.33□□□□□ -0.11
SHOX2-203ENST00000441443 K7EQD1 137 aa14.33□□□□□ -0.12
SHOX2-203ENST00000441443 Q6ZTI0 123 aa14.33□□□□□ -0.12
SHOX2-203ENST00000441443 OR13C6PQ8NH95 151 aa14.33□□□□□ -0.12
SHOX2-203ENST00000441443 UBE2L6O14933 153 aa14.33□□□□□ -0.12
SHOX2-203ENST00000441443 OVOL2Q9BRP0 275 aa14.33□□□□□ -0.12
SHOX2-203ENST00000441443 UPK3BQ9BT76 320 aa14.33□□□□□ -0.12
SHOX2-203ENST00000441443 DYNLRB2Q8TF09 96 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms