RNA–Protein interactions for RNA: ENST00000439286.5

GARNL3-206, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-206ENST00000439286 SPANXA1Q9NS26 97 aa8.37□□□□□ -1.07
GARNL3-206ENST00000439286 NDUFA1O15239 70 aa8.36□□□□□ -1.07
GARNL3-206ENST00000439286 RAB5AP20339 215 aa8.36□□□□□ -1.07
GARNL3-206ENST00000439286 HBBP68871 147 aa8.36□□□□□ -1.07
GARNL3-206ENST00000439286 C1orf137Q5JT78 98 aa8.36□□□□□ -1.07
GARNL3-206ENST00000439286 D6R8Y8 96 aa8.35□□□□□ -1.07
GARNL3-206ENST00000439286 PPBPP02775 128 aa8.35□□□□□ -1.07
GARNL3-206ENST00000439286 RPL39P62891 51 aaKnown RBP8.35□□□□□ -1.07
GARNL3-206ENST00000439286 MRPL54Q6P161 138 aaKnown RBP8.35□□□□□ -1.07
GARNL3-206ENST00000439286 SMIM2Q9BVW6 85 aa8.35□□□□□ -1.07
GARNL3-206ENST00000439286 SMDT1Q9H4I9 107 aa8.35□□□□□ -1.07
GARNL3-206ENST00000439286 MRPL35Q9NZE8 188 aaKnown RBP8.35□□□□□ -1.07
GARNL3-206ENST00000439286 PSORS1C2Q9UIG4 136 aa8.35□□□□□ -1.07
GARNL3-206ENST00000439286 TGIF2-C20orf24A0A0A6YYL0 155 aa8.34□□□□□ -1.07
GARNL3-206ENST00000439286 IFITM10A6NMD0 228 aa8.34□□□□□ -1.07
GARNL3-206ENST00000439286 IFI27P40305 119 aaPredicted RBP8.34□□□□□ -1.07
GARNL3-206ENST00000439286 MRPS36P82909 103 aaKnown RBP8.34□□□□□ -1.07
GARNL3-206ENST00000439286 PHF5AQ7RTV0 110 aaKnown RBP8.34□□□□□ -1.07
GARNL3-206ENST00000439286 A0A087WZ39 114 aa8.33□□□□□ -1.08
GARNL3-206ENST00000439286 IGHV3OR16-9A0A0B4J2B5 98 aa8.32□□□□□ -1.08
GARNL3-206ENST00000439286 ODF1Q14990 250 aa8.32□□□□□ -1.08
GARNL3-206ENST00000439286 ORMDL3Q8N138 153 aa8.32□□□□□ -1.08
GARNL3-206ENST00000439286 DIRC1Q969H9 104 aa8.32□□□□□ -1.08
GARNL3-206ENST00000439286 C9JQL5 133 aa8.31□□□□□ -1.08
GARNL3-206ENST00000439286 NPYP01303 97 aa8.31□□□□□ -1.08
GARNL3-206ENST00000439286 TMEM136Q6ZRR5 245 aa8.31□□□□□ -1.08
GARNL3-206ENST00000439286 SRSF3P84103 164 aaKnown RBP8.3□□□□□ -1.08
GARNL3-206ENST00000439286 GAGE2EQ4V326 116 aa8.3□□□□□ -1.08
GARNL3-206ENST00000439286 UNQ6190/PRO20217Q6UXQ8 127 aa8.3□□□□□ -1.08
GARNL3-206ENST00000439286 PRELID3AQ96N28 172 aa8.3□□□□□ -1.08
GARNL3-206ENST00000439286 GAGE2DQ9UEU5 116 aa8.3□□□□□ -1.08
GARNL3-206ENST00000439286 TNXBP22105 4242 aa8.3□□□□□ -1.08
GARNL3-206ENST00000439286 A0A1B0GXF2 115 aa8.29□□□□□ -1.08
GARNL3-206ENST00000439286 IGLV7-43P04211 117 aa8.29□□□□□ -1.08
GARNL3-206ENST00000439286 TLX1NBP0CAT3 122 aa8.29□□□□□ -1.08
GARNL3-206ENST00000439286 LCE2DQ5TA82 110 aaPredicted RBP8.29□□□□□ -1.08
GARNL3-206ENST00000439286 ATP5L2Q7Z4Y8 100 aa8.29□□□□□ -1.08
GARNL3-206ENST00000439286 FAM19A5Q7Z5A7 132 aaPredicted RBP8.29□□□□□ -1.08
GARNL3-206ENST00000439286 PACRGQ96M98 296 aaPredicted RBP8.29□□□□□ -1.08
GARNL3-206ENST00000439286 PYGO1Q9Y3Y4 419 aa8.29□□□□□ -1.08
GARNL3-206ENST00000439286 UBE2BP63146 152 aa8.28□□□□□ -1.08
GARNL3-206ENST00000439286 C10orf25Q5T742 122 aa8.28□□□□□ -1.08
GARNL3-206ENST00000439286 Q6ZN92 141 aa8.28□□□□□ -1.08
GARNL3-206ENST00000439286 TEX43Q6ZNM6 134 aa8.28□□□□□ -1.08
GARNL3-206ENST00000439286 TMEM141Q96I45 108 aa8.28□□□□□ -1.08
GARNL3-206ENST00000439286 C2orf88Q9BSF0 95 aa8.28□□□□□ -1.08
GARNL3-206ENST00000439286 C6orf48Q9UBA6 75 aa8.28□□□□□ -1.08
GARNL3-206ENST00000439286 LOC389332A0A1B0GUA5 103 aa8.27□□□□□ -1.09
GARNL3-206ENST00000439286 FAM104AQ969W3 186 aa8.27□□□□□ -1.09
GARNL3-206ENST00000439286 MAP1LC3AQ9H492 121 aa8.27□□□□□ -1.09
GARNL3-206ENST00000439286 LAMTOR2Q9Y2Q5 125 aa8.27□□□□□ -1.09
GARNL3-206ENST00000439286 TRBV30A0A0K0K1B3 111 aa8.26□□□□□ -1.09
GARNL3-206ENST00000439286 FAM168BA1KXE4 195 aa8.26□□□□□ -1.09
GARNL3-206ENST00000439286 PRSS2P07478 247 aa8.26□□□□□ -1.09
GARNL3-206ENST00000439286 IGLV4-3A0A075B6K6 122 aa8.25□□□□□ -1.09
GARNL3-206ENST00000439286 LINC00242Q5T6M2 205 aa8.25□□□□□ -1.09
GARNL3-206ENST00000439286 VCX2Q9H322 139 aa8.25□□□□□ -1.09
GARNL3-206ENST00000439286 CYSLTR1Q9Y271 337 aa8.25□□□□□ -1.09
GARNL3-206ENST00000439286 H0Y9J4 135 aa8.24□□□□□ -1.09
GARNL3-206ENST00000439286 M0QXV9 152 aa8.24□□□□□ -1.09
GARNL3-206ENST00000439286 CKS1BP61024 79 aa8.24□□□□□ -1.09
GARNL3-206ENST00000439286 KIAA0087Q14695 138 aa8.24□□□□□ -1.09
GARNL3-206ENST00000439286 LINC01561Q8N1V8 128 aa8.24□□□□□ -1.09
GARNL3-206ENST00000439286 PRR26Q8N8Z3 221 aa8.24□□□□□ -1.09
GARNL3-206ENST00000439286 PRSS47A8MTI9 375 aa8.23□□□□□ -1.09
GARNL3-206ENST00000439286 NDUFC2-KCTD14E9PQ53 114 aa8.23□□□□□ -1.09
GARNL3-206ENST00000439286 UBE2D1P51668 147 aa8.23□□□□□ -1.09
GARNL3-206ENST00000439286 ORMDL2Q53FV1 153 aa8.23□□□□□ -1.09
GARNL3-206ENST00000439286 C6orf226Q5I0X4 101 aa8.23□□□□□ -1.09
GARNL3-206ENST00000439286 Q8N8P6 123 aa8.23□□□□□ -1.09
GARNL3-206ENST00000439286 TOMM7Q9P0U1 55 aa8.23□□□□□ -1.09
GARNL3-206ENST00000439286 A0A1B0GVG6 124 aa8.22□□□□□ -1.09
GARNL3-206ENST00000439286 MT-ND4LP03901 98 aa8.22□□□□□ -1.09
GARNL3-206ENST00000439286 G0S2P27469 103 aa8.22□□□□□ -1.09
GARNL3-206ENST00000439286 PNRC1Q12796 327 aaPredicted RBP8.22□□□□□ -1.09
GARNL3-206ENST00000439286 C2orf82Q6UX34 121 aa8.22□□□□□ -1.09
GARNL3-206ENST00000439286 C2orf66Q6UXQ4 117 aa8.22□□□□□ -1.09
GARNL3-206ENST00000439286 ANAPC16Q96DE5 110 aa8.22□□□□□ -1.09
GARNL3-206ENST00000439286 LRP2P98164 4655 aa8.21□□□□□ -1.09
GARNL3-206ENST00000439286 RNF213Q63HN8 5207 aa8.21□□□□□ -1.09
GARNL3-206ENST00000439286 IGLV1-50A0A075B6I6 118 aa8.21□□□□□ -1.1
GARNL3-206ENST00000439286 SEC11AP67812 179 aa8.21□□□□□ -1.1
GARNL3-206ENST00000439286 PAPPA-AS1Q5QFB9 102 aa8.21□□□□□ -1.1
GARNL3-206ENST00000439286 K7EMI3 77 aa8.2□□□□□ -1.1
GARNL3-206ENST00000439286 NPSP0C0P6 89 aa8.2□□□□□ -1.1
GARNL3-206ENST00000439286 RAB14P61106 215 aa8.2□□□□□ -1.1
GARNL3-206ENST00000439286 ALKBH7Q9BT30 221 aaPredicted RBP8.2□□□□□ -1.1
GARNL3-206ENST00000439286 RPL13AP40429 203 aaKnown RBP8.19□□□□□ -1.1
GARNL3-206ENST00000439286 LBHQ53QV2 105 aaPredicted RBP8.19□□□□□ -1.1
GARNL3-206ENST00000439286 KRTAP11-1Q8IUC1 163 aa8.19□□□□□ -1.1
GARNL3-206ENST00000439286 CTDSP1Q9GZU7 261 aa8.19□□□□□ -1.1
GARNL3-206ENST00000439286 GEMIN7Q9H840 131 aaKnown RBP8.19□□□□□ -1.1
GARNL3-206ENST00000439286 NXT2Q9NPJ8 142 aaKnown RBP8.19□□□□□ -1.1
GARNL3-206ENST00000439286 HERVK_113P63121 156 aa8.18□□□□□ -1.1
GARNL3-206ENST00000439286 C9orf129Q5T035 196 aaKnown RBP8.18□□□□□ -1.1
GARNL3-206ENST00000439286 ZC2HC1BQ5TFG8 222 aa8.18□□□□□ -1.1
GARNL3-206ENST00000439286 AMELXQ99217 191 aa8.18□□□□□ -1.1
GARNL3-206ENST00000439286 Q8IZM0 81 aa8.17□□□□□ -1.1
GARNL3-206ENST00000439286 LINC00469Q8N7U9 141 aa8.17□□□□□ -1.1
GARNL3-206ENST00000439286 IGIPA6NJ69 53 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms