RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 ORMDL3Q8N138 153 aa11.49□□□□□ -0.57
AC004540.1-201ENST00000439120 ORAOV1Q8WV07 137 aa11.49□□□□□ -0.57
AC004540.1-201ENST00000439120 ATP5L2Q7Z4Y8 100 aa11.48□□□□□ -0.57
AC004540.1-201ENST00000439120 LINC01600Q96MT4 127 aa11.48□□□□□ -0.57
AC004540.1-201ENST00000439120 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.47□□□□□ -0.57
AC004540.1-201ENST00000439120 MRPS36P82909 103 aaKnown RBP11.47□□□□□ -0.57
AC004540.1-201ENST00000439120 PRELID3AQ96N28 172 aa11.47□□□□□ -0.57
AC004540.1-201ENST00000439120 IFI27P40305 119 aaPredicted RBP11.46□□□□□ -0.57
AC004540.1-201ENST00000439120 TMEM136Q6ZRR5 245 aa11.46□□□□□ -0.57
AC004540.1-201ENST00000439120 OPRPNQ99935 248 aaPredicted RBP11.46□□□□□ -0.57
AC004540.1-201ENST00000439120 A0A0J9YXV3 536 aa11.45□□□□□ -0.58
AC004540.1-201ENST00000439120 RNF151Q2KHN1 245 aa11.45□□□□□ -0.58
AC004540.1-201ENST00000439120 C9orf116Q5BN46 136 aaPredicted RBP11.45□□□□□ -0.58
AC004540.1-201ENST00000439120 TGIF2-C20orf24A0A0A6YYL0 155 aa11.44□□□□□ -0.58
AC004540.1-201ENST00000439120 IGHV3OR16-9A0A0B4J2B5 98 aa11.44□□□□□ -0.58
AC004540.1-201ENST00000439120 A0A1W2PNN7 141 aa11.44□□□□□ -0.58
AC004540.1-201ENST00000439120 F8WDY8 70 aa11.44□□□□□ -0.58
AC004540.1-201ENST00000439120 NDUFA1O15239 70 aa11.44□□□□□ -0.58
AC004540.1-201ENST00000439120 IMMP2LQ96T52 175 aa11.44□□□□□ -0.58
AC004540.1-201ENST00000439120 MT-ND6P03923 174 aa11.43□□□□□ -0.58
AC004540.1-201ENST00000439120 MRPL35Q9NZE8 188 aaKnown RBP11.43□□□□□ -0.58
AC004540.1-201ENST00000439120 FAM104AQ969W3 186 aa11.42□□□□□ -0.58
AC004540.1-201ENST00000439120 LOC389332A0A1B0GUA5 103 aa11.41□□□□□ -0.58
AC004540.1-201ENST00000439120 RAB14P61106 215 aa11.41□□□□□ -0.58
AC004540.1-201ENST00000439120 PNRC1Q12796 327 aaPredicted RBP11.41□□□□□ -0.58
AC004540.1-201ENST00000439120 MAP1LC3AQ9H492 121 aa11.41□□□□□ -0.58
AC004540.1-201ENST00000439120 LAMTOR2Q9Y2Q5 125 aa11.41□□□□□ -0.58
AC004540.1-201ENST00000439120 MT-ND4LP03901 98 aa11.4□□□□□ -0.58
AC004540.1-201ENST00000439120 SRSF9Q13242 221 aaKnown RBP eCLIP11.4□□□□□ -0.58
AC004540.1-201ENST00000439120 TMEM141Q96I45 108 aa11.4□□□□□ -0.58
AC004540.1-201ENST00000439120 PYGO1Q9Y3Y4 419 aa11.4□□□□□ -0.58
AC004540.1-201ENST00000439120 PHF5AQ7RTV0 110 aaKnown RBP11.39□□□□□ -0.59
AC004540.1-201ENST00000439120 ANAPC16Q96DE5 110 aa11.39□□□□□ -0.59
AC004540.1-201ENST00000439120 PSORS1C2Q9UIG4 136 aa11.39□□□□□ -0.59
AC004540.1-201ENST00000439120 IGLV4-3A0A075B6K6 122 aa11.38□□□□□ -0.59
AC004540.1-201ENST00000439120 UNQ6190/PRO20217Q6UXQ8 127 aa11.38□□□□□ -0.59
AC004540.1-201ENST00000439120 Q6ZN92 141 aa11.38□□□□□ -0.59
AC004540.1-201ENST00000439120 TEX43Q6ZNM6 134 aa11.38□□□□□ -0.59
AC004540.1-201ENST00000439120 C2orf88Q9BSF0 95 aa11.38□□□□□ -0.59
AC004540.1-201ENST00000439120 UBR4Q5T4S7 5183 aa11.37□□□□□ -0.59
AC004540.1-201ENST00000439120 A0A087WZ39 114 aa11.37□□□□□ -0.59
AC004540.1-201ENST00000439120 C1orf137Q5JT78 98 aa11.37□□□□□ -0.59
AC004540.1-201ENST00000439120 C10orf25Q5T742 122 aa11.37□□□□□ -0.59
AC004540.1-201ENST00000439120 CYSLTR1Q9Y271 337 aa11.37□□□□□ -0.59
AC004540.1-201ENST00000439120 TNXBP22105 4242 aa11.36□□□□□ -0.59
AC004540.1-201ENST00000439120 PRSS47A8MTI9 375 aa11.36□□□□□ -0.59
AC004540.1-201ENST00000439120 LINC00242Q5T6M2 205 aa11.36□□□□□ -0.59
AC004540.1-201ENST00000439120 C6orf48Q9UBA6 75 aa11.36□□□□□ -0.59
AC004540.1-201ENST00000439120 TLX1NBP0CAT3 122 aa11.35□□□□□ -0.59
AC004540.1-201ENST00000439120 GAGE2EQ4V326 116 aa11.35□□□□□ -0.59
AC004540.1-201ENST00000439120 Q8N8P6 123 aa11.35□□□□□ -0.59
AC004540.1-201ENST00000439120 GAGE2DQ9UEU5 116 aa11.35□□□□□ -0.59
AC004540.1-201ENST00000439120 KRTAP10-8P60410 259 aa11.34□□□□□ -0.59
AC004540.1-201ENST00000439120 ORMDL2Q53FV1 153 aa11.34□□□□□ -0.59
AC004540.1-201ENST00000439120 C2orf66Q6UXQ4 117 aa11.34□□□□□ -0.59
AC004540.1-201ENST00000439120 FAM19A5Q7Z5A7 132 aaPredicted RBP11.34□□□□□ -0.59
AC004540.1-201ENST00000439120 PACRGQ96M98 296 aaPredicted RBP11.34□□□□□ -0.59
AC004540.1-201ENST00000439120 FAM168BA1KXE4 195 aa11.33□□□□□ -0.6
AC004540.1-201ENST00000439120 ODF1Q14990 250 aa11.33□□□□□ -0.6
AC004540.1-201ENST00000439120 VCX2Q9H322 139 aa11.33□□□□□ -0.6
AC004540.1-201ENST00000439120 TRBV30A0A0K0K1B3 111 aa11.32□□□□□ -0.6
AC004540.1-201ENST00000439120 PRSS2P07478 247 aa11.32□□□□□ -0.6
AC004540.1-201ENST00000439120 UBE2D1P51668 147 aa11.32□□□□□ -0.6
AC004540.1-201ENST00000439120 CTDSP1Q9GZU7 261 aa11.32□□□□□ -0.6
AC004540.1-201ENST00000439120 K7EMI3 77 aa11.31□□□□□ -0.6
AC004540.1-201ENST00000439120 KIAA0087Q14695 138 aa11.31□□□□□ -0.6
AC004540.1-201ENST00000439120 C2orf82Q6UX34 121 aa11.31□□□□□ -0.6
AC004540.1-201ENST00000439120 NXT2Q9NPJ8 142 aaKnown RBP11.31□□□□□ -0.6
AC004540.1-201ENST00000439120 ZC2HC1BQ5TFG8 222 aa11.3□□□□□ -0.6
AC004540.1-201ENST00000439120 LINC01561Q8N1V8 128 aa11.3□□□□□ -0.6
AC004540.1-201ENST00000439120 NDUFC2-KCTD14E9PQ53 114 aa11.29□□□□□ -0.6
AC004540.1-201ENST00000439120 IGLV7-43P04211 117 aa11.29□□□□□ -0.6
AC004540.1-201ENST00000439120 NPSP0C0P6 89 aa11.29□□□□□ -0.6
AC004540.1-201ENST00000439120 G0S2P27469 103 aa11.29□□□□□ -0.6
AC004540.1-201ENST00000439120 CKS1BP61024 79 aa11.29□□□□□ -0.6
AC004540.1-201ENST00000439120 UBE2BP63146 152 aa11.29□□□□□ -0.6
AC004540.1-201ENST00000439120 DIRC1Q969H9 104 aa11.29□□□□□ -0.6
AC004540.1-201ENST00000439120 TOMM7Q9P0U1 55 aa11.29□□□□□ -0.6
AC004540.1-201ENST00000439120 M0QXV9 152 aa11.28□□□□□ -0.6
AC004540.1-201ENST00000439120 PAPPA-AS1Q5QFB9 102 aa11.28□□□□□ -0.6
AC004540.1-201ENST00000439120 LINC00173Q6ZV60 143 aa11.28□□□□□ -0.6
AC004540.1-201ENST00000439120 AMELXQ99217 191 aa11.28□□□□□ -0.6
AC004540.1-201ENST00000439120 C6orf226Q5I0X4 101 aa11.27□□□□□ -0.61
AC004540.1-201ENST00000439120 SEC11AP67812 179 aa11.26□□□□□ -0.61
AC004540.1-201ENST00000439120 IGIPA6NJ69 53 aa11.25□□□□□ -0.61
AC004540.1-201ENST00000439120 HERVK_113P63121 156 aa11.25□□□□□ -0.61
AC004540.1-201ENST00000439120 ALKBH7Q9BT30 221 aaPredicted RBP11.25□□□□□ -0.61
AC004540.1-201ENST00000439120 GEMIN7Q9H840 131 aaKnown RBP11.25□□□□□ -0.61
AC004540.1-201ENST00000439120 CLLU1Q5K131 121 aa11.24□□□□□ -0.61
AC004540.1-201ENST00000439120 H0Y9J4 135 aa11.23□□□□□ -0.61
AC004540.1-201ENST00000439120 KRTAP11-1Q8IUC1 163 aa11.23□□□□□ -0.61
AC004540.1-201ENST00000439120 Q8IZM0 81 aa11.23□□□□□ -0.61
AC004540.1-201ENST00000439120 TIMM17AQ99595 171 aa11.23□□□□□ -0.61
AC004540.1-201ENST00000439120 KIAA1644Q3SXP7 199 aa11.22□□□□□ -0.61
AC004540.1-201ENST00000439120 C9orf129Q5T035 196 aaKnown RBP11.22□□□□□ -0.61
AC004540.1-201ENST00000439120 FAM19A3Q7Z5A8 133 aa11.22□□□□□ -0.61
AC004540.1-201ENST00000439120 KRTAP7-1Q8IUC3 87 aa11.21□□□□□ -0.61
AC004540.1-201ENST00000439120 TOMM6Q96B49 74 aa11.21□□□□□ -0.61
AC004540.1-201ENST00000439120 CDKN2A-AS1Q9UH64 79 aa11.21□□□□□ -0.61
AC004540.1-201ENST00000439120 TRAV9-1A0A075B6T8 112 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms