RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 COX7A2LO14548 114 aa12.19□□□□□ -0.46
HDAC6-208ENST00000438518 EREGO14944 169 aa12.19□□□□□ -0.46
HDAC6-208ENST00000438518 C14orf177Q52M58 125 aa12.19□□□□□ -0.46
HDAC6-208ENST00000438518 CFAP161Q6P656 301 aa12.19□□□□□ -0.46
HDAC6-208ENST00000438518 LINC01561Q8N1V8 128 aa12.19□□□□□ -0.46
HDAC6-208ENST00000438518 HIST3H2BBQ8N257 126 aa12.19□□□□□ -0.46
HDAC6-208ENST00000438518 C5orf52A6NGY3 159 aa12.18□□□□□ -0.46
HDAC6-208ENST00000438518 IGLC3P0DOY3 106 aa12.18□□□□□ -0.46
HDAC6-208ENST00000438518 SPATA12Q7Z6I5 190 aa12.18□□□□□ -0.46
HDAC6-208ENST00000438518 MAPKAPK5-AS1Q8N8E1 139 aa12.18□□□□□ -0.46
HDAC6-208ENST00000438518 LRCOL1A6NCL2 159 aa12.17□□□□□ -0.46
HDAC6-208ENST00000438518 F8VRH5 84 aa12.17□□□□□ -0.46
HDAC6-208ENST00000438518 APOMO95445 188 aa12.17□□□□□ -0.46
HDAC6-208ENST00000438518 CHTOPQ9Y3Y2 248 aaKnown RBP12.17□□□□□ -0.46
HDAC6-208ENST00000438518 FRAS1Q86XX4 4008 aa12.16□□□□□ -0.46
HDAC6-208ENST00000438518 IGLV5-45A0A087WSX0 123 aa12.16□□□□□ -0.46
HDAC6-208ENST00000438518 A0A087WTM6 91 aa12.16□□□□□ -0.46
HDAC6-208ENST00000438518 A0A087WZ39 114 aa12.16□□□□□ -0.46
HDAC6-208ENST00000438518 IGHV1-58A0A0C4DH39 117 aa12.16□□□□□ -0.46
HDAC6-208ENST00000438518 A0A0J9YXV3 536 aa12.16□□□□□ -0.46
HDAC6-208ENST00000438518 MALP21145 153 aa12.16□□□□□ -0.46
HDAC6-208ENST00000438518 SNRPEP62304 92 aaKnown RBP12.16□□□□□ -0.46
HDAC6-208ENST00000438518 TNP2Q05952 138 aa12.16□□□□□ -0.46
HDAC6-208ENST00000438518 SYS1-DBNDD2H3BUS1 97 aa12.15□□□□□ -0.46
HDAC6-208ENST00000438518 CHAC1Q9BUX1 264 aa12.15□□□□□ -0.46
HDAC6-208ENST00000438518 IGLV4-69A0A075B6H9 119 aa12.14□□□□□ -0.47
HDAC6-208ENST00000438518 USP17L23D6RBM5 183 aa12.14□□□□□ -0.47
HDAC6-208ENST00000438518 H3BRM9 83 aa12.14□□□□□ -0.47
HDAC6-208ENST00000438518 COX6A2Q02221 97 aa12.14□□□□□ -0.47
HDAC6-208ENST00000438518 ODF1Q14990 250 aa12.14□□□□□ -0.47
HDAC6-208ENST00000438518 PET117Q6UWS5 81 aa12.14□□□□□ -0.47
HDAC6-208ENST00000438518 HIST1H2BLQ99880 126 aa12.14□□□□□ -0.47
HDAC6-208ENST00000438518 PLNP26678 52 aa12.13□□□□□ -0.47
HDAC6-208ENST00000438518 AKR1D1P51857 326 aa12.13□□□□□ -0.47
HDAC6-208ENST00000438518 C5orf38Q86SI9 138 aa12.13□□□□□ -0.47
HDAC6-208ENST00000438518 OR10D4PQ8NGN7 298 aa12.13□□□□□ -0.47
HDAC6-208ENST00000438518 H0Y8G0 127 aa12.12□□□□□ -0.47
HDAC6-208ENST00000438518 LINC00469Q8N7U9 141 aa12.12□□□□□ -0.47
HDAC6-208ENST00000438518 Q8N814 137 aa12.12□□□□□ -0.47
HDAC6-208ENST00000438518 MRPL35Q9NZE8 188 aaKnown RBP12.12□□□□□ -0.47
HDAC6-208ENST00000438518 CDKN2A-AS1Q9UH64 79 aa12.12□□□□□ -0.47
HDAC6-208ENST00000438518 FAT2Q9NYQ8 4349 aa12.11□□□□□ -0.47
HDAC6-208ENST00000438518 GVQW2A0A096LPI5 108 aaPredicted RBP12.11□□□□□ -0.47
HDAC6-208ENST00000438518 C3orf79P0CE67 100 aa12.11□□□□□ -0.47
HDAC6-208ENST00000438518 C15orf56Q8N910 161 aa12.11□□□□□ -0.47
HDAC6-208ENST00000438518 IGHV3-64A0A075B6Q5 118 aa12.1□□□□□ -0.47
HDAC6-208ENST00000438518 C20orf202A1L168 122 aa12.1□□□□□ -0.47
HDAC6-208ENST00000438518 ZNF22P17026 224 aaPredicted RBP12.1□□□□□ -0.47
HDAC6-208ENST00000438518 NTN5Q8WTR8 489 aaPredicted RBP12.1□□□□□ -0.47
HDAC6-208ENST00000438518 C11orf86A6NJI1 115 aa12.09□□□□□ -0.47
HDAC6-208ENST00000438518 LECT2O14960 151 aa12.09□□□□□ -0.47
HDAC6-208ENST00000438518 DPM2O94777 84 aa12.09□□□□□ -0.47
HDAC6-208ENST00000438518 KRTDAPP60985 99 aa12.09□□□□□ -0.47
HDAC6-208ENST00000438518 WFDC2Q14508 124 aa12.09□□□□□ -0.47
HDAC6-208ENST00000438518 TMA7Q9Y2S6 64 aaKnown RBP12.09□□□□□ -0.47
HDAC6-208ENST00000438518 F8WDY8 70 aa12.08□□□□□ -0.48
HDAC6-208ENST00000438518 ZNF561-AS1K7EIQ3 104 aa12.08□□□□□ -0.48
HDAC6-208ENST00000438518 LINC01545Q5VT33 79 aa12.08□□□□□ -0.48
HDAC6-208ENST00000438518 hDV102S1A0JD36 115 aa12.07□□□□□ -0.48
HDAC6-208ENST00000438518 IGKCP01834 107 aa12.07□□□□□ -0.48
HDAC6-208ENST00000438518 TMEM170BQ5T4T1 132 aa12.07□□□□□ -0.48
HDAC6-208ENST00000438518 CDPF1Q6NVV7 123 aa12.07□□□□□ -0.48
HDAC6-208ENST00000438518 ORAOV1Q8WV07 137 aa12.07□□□□□ -0.48
HDAC6-208ENST00000438518 SMIM1B2RUZ4 78 aa12.06□□□□□ -0.48
HDAC6-208ENST00000438518 PGPEP1Q9NXJ5 209 aa12.06□□□□□ -0.48
HDAC6-208ENST00000438518 SPAG11BQ08648 103 aa12.05□□□□□ -0.48
HDAC6-208ENST00000438518 Q8IZM0 81 aa12.05□□□□□ -0.48
HDAC6-208ENST00000438518 C2orf48Q96LS8 159 aa12.05□□□□□ -0.48
HDAC6-208ENST00000438518 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.04□□□□□ -0.48
HDAC6-208ENST00000438518 A0A1B0GVY2 172 aa12.04□□□□□ -0.48
HDAC6-208ENST00000438518 CNBPP62633 177 aaKnown RBP12.04□□□□□ -0.48
HDAC6-208ENST00000438518 HIGD2BQ4VC39 106 aa12.04□□□□□ -0.48
HDAC6-208ENST00000438518 PRSS2P07478 247 aa12.03□□□□□ -0.48
HDAC6-208ENST00000438518 IGLV5-39A0A0G2JS06 123 aa12.02□□□□□ -0.49
HDAC6-208ENST00000438518 TMEM223A0PJW6 202 aa12.02□□□□□ -0.49
HDAC6-208ENST00000438518 CXCL5P42830 114 aa12.02□□□□□ -0.49
HDAC6-208ENST00000438518 HERVK_113P61574 105 aa12.02□□□□□ -0.49
HDAC6-208ENST00000438518 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.01□□□□□ -0.49
HDAC6-208ENST00000438518 SPINK8P0C7L1 97 aa12.01□□□□□ -0.49
HDAC6-208ENST00000438518 KIAA0087Q14695 138 aa12.01□□□□□ -0.49
HDAC6-208ENST00000438518 PMCHL2Q9BQD1 86 aa12.01□□□□□ -0.49
HDAC6-208ENST00000438518 PKD1P98161 4303 aa12.01□□□□□ -0.49
HDAC6-208ENST00000438518 IGLV5-52A0A0A0MRZ9 124 aa12□□□□□ -0.49
HDAC6-208ENST00000438518 SFTA2Q6UW10 78 aa12□□□□□ -0.49
HDAC6-208ENST00000438518 CAMK2N2Q96S95 79 aa12□□□□□ -0.49
HDAC6-208ENST00000438518 PKIGQ9Y2B9 76 aa12□□□□□ -0.49
HDAC6-208ENST00000438518 DNAH11Q96DT5 4516 aa11.99□□□□□ -0.49
HDAC6-208ENST00000438518 NDUFA1O15239 70 aa11.99□□□□□ -0.49
HDAC6-208ENST00000438518 C6orf226Q5I0X4 101 aa11.99□□□□□ -0.49
HDAC6-208ENST00000438518 COX7B2Q8TF08 81 aa11.99□□□□□ -0.49
HDAC6-208ENST00000438518 TOMM7Q9P0U1 55 aa11.99□□□□□ -0.49
HDAC6-208ENST00000438518 CKS1BP61024 79 aa11.98□□□□□ -0.49
HDAC6-208ENST00000438518 SYCNQ0VAF6 134 aa11.98□□□□□ -0.49
HDAC6-208ENST00000438518 KRTAP10-2P60368 255 aa11.97□□□□□ -0.49
HDAC6-208ENST00000438518 C9orf163Q8N9P6 203 aa11.97□□□□□ -0.49
HDAC6-208ENST00000438518 CARD19Q96LW7 228 aa11.97□□□□□ -0.49
HDAC6-208ENST00000438518 RNF151Q2KHN1 245 aa11.96□□□□□ -0.49
HDAC6-208ENST00000438518 TRBV30A0A0K0K1B3 111 aa11.95□□□□□ -0.5
HDAC6-208ENST00000438518 SLPIP03973 132 aa11.95□□□□□ -0.5
HDAC6-208ENST00000438518 PLEKHB2Q96CS7 222 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 169.3 ms