RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 SDHAF1A6NFY7 115 aa5.47□□□□□ -1.53
RTN4-211ENST00000438462 KRTAP4-9Q9BYQ8 210 aa5.47□□□□□ -1.53
RTN4-211ENST00000438462 GEMIN7Q9H840 131 aaKnown RBP5.47□□□□□ -1.53
RTN4-211ENST00000438462 SCO1O75880 301 aa5.46□□□□□ -1.54
RTN4-211ENST00000438462 STAG3L2P0CL84 134 aa5.46□□□□□ -1.54
RTN4-211ENST00000438462 STAG3L3P0CL85 134 aa5.46□□□□□ -1.54
RTN4-211ENST00000438462 UBE2G1P62253 170 aa5.46□□□□□ -1.54
RTN4-211ENST00000438462 Q6ZUT4 128 aa5.46□□□□□ -1.54
RTN4-211ENST00000438462 TMEM242Q9NWH2 141 aa5.46□□□□□ -1.54
RTN4-211ENST00000438462 I3L3M4 83 aa5.45□□□□□ -1.54
RTN4-211ENST00000438462 LTAP01374 205 aa5.45□□□□□ -1.54
RTN4-211ENST00000438462 PMCHP20382 165 aa5.45□□□□□ -1.54
RTN4-211ENST00000438462 RAB32Q13637 225 aa5.45□□□□□ -1.54
RTN4-211ENST00000438462 Q8N9P0 234 aaPredicted RBP5.45□□□□□ -1.54
RTN4-211ENST00000438462 CHTOPQ9Y3Y2 248 aaKnown RBP5.45□□□□□ -1.54
RTN4-211ENST00000438462 CDC34P49427 236 aaPredicted RBP5.44□□□□□ -1.54
RTN4-211ENST00000438462 NKAPP1Q8N9T2 125 aa5.44□□□□□ -1.54
RTN4-211ENST00000438462 FMC1Q96HJ9 113 aa5.44□□□□□ -1.54
RTN4-211ENST00000438462 C7orf77A4D0Y5 90 aa5.43□□□□□ -1.54
RTN4-211ENST00000438462 M0R378 163 aa5.43□□□□□ -1.54
RTN4-211ENST00000438462 TRGC1P0CF51 173 aa5.43□□□□□ -1.54
RTN4-211ENST00000438462 MZT2BQ6NZ67 158 aa5.43□□□□□ -1.54
RTN4-211ENST00000438462 SSBP3-AS1Q7Z2R9 100 aa5.43□□□□□ -1.54
RTN4-211ENST00000438462 LINC01551Q86U37 167 aa5.43□□□□□ -1.54
RTN4-211ENST00000438462 RNASE7Q9H1E1 156 aaKnown RBP5.43□□□□□ -1.54
RTN4-211ENST00000438462 IGLV5-37A0A075B6J1 123 aa5.42□□□□□ -1.54
RTN4-211ENST00000438462 A0A1W2PRE2 83 aa5.42□□□□□ -1.54
RTN4-211ENST00000438462 LCE1AQ5T7P2 110 aa5.42□□□□□ -1.54
RTN4-211ENST00000438462 HIST1H2BAQ96A08 127 aa5.42□□□□□ -1.54
RTN4-211ENST00000438462 TMEM167BQ9NRX6 74 aa5.42□□□□□ -1.54
RTN4-211ENST00000438462 FAM231DQ6ZW35 169 aa5.41□□□□□ -1.54
RTN4-211ENST00000438462 TOMM5Q8N4H5 51 aa5.41□□□□□ -1.54
RTN4-211ENST00000438462 CSDC2Q9Y534 153 aaKnown RBP5.41□□□□□ -1.54
RTN4-211ENST00000438462 NPSP0C0P6 89 aa5.4□□□□□ -1.54
RTN4-211ENST00000438462 IGLC6P0CF74 106 aa5.4□□□□□ -1.54
RTN4-211ENST00000438462 AP3S2P59780 193 aa5.4□□□□□ -1.54
RTN4-211ENST00000438462 TIMM17AQ99595 171 aa5.4□□□□□ -1.54
RTN4-211ENST00000438462 NDUFB6O95139 128 aa5.39□□□□□ -1.55
RTN4-211ENST00000438462 LINC00483Q53H64 154 aa5.39□□□□□ -1.55
RTN4-211ENST00000438462 SCGB1C1Q8TD33 95 aa5.39□□□□□ -1.55
RTN4-211ENST00000438462 RAB24Q969Q5 203 aa5.39□□□□□ -1.55
RTN4-211ENST00000438462 KRTAP4-2Q9BYR5 136 aa5.39□□□□□ -1.55
RTN4-211ENST00000438462 TRBV20-1A0A075B6N2 111 aa5.38□□□□□ -1.55
RTN4-211ENST00000438462 RAB19A4D1S5 217 aa5.38□□□□□ -1.55
RTN4-211ENST00000438462 KIAA1644Q3SXP7 199 aa5.38□□□□□ -1.55
RTN4-211ENST00000438462 TGIF2-C20orf24A0A0A6YYL0 155 aa5.37□□□□□ -1.55
RTN4-211ENST00000438462 FAM236DA0A1B0GTK5 79 aa5.37□□□□□ -1.55
RTN4-211ENST00000438462 CXorf1O96002 111 aa5.37□□□□□ -1.55
RTN4-211ENST00000438462 FAM236CP0DP71 79 aa5.37□□□□□ -1.55
RTN4-211ENST00000438462 LIMD2Q9BT23 127 aa5.37□□□□□ -1.55
RTN4-211ENST00000438462 FUNDC2Q9BWH2 189 aa5.37□□□□□ -1.55
RTN4-211ENST00000438462 RAB26Q9ULW5 256 aa5.37□□□□□ -1.55
RTN4-211ENST00000438462 DSTQ03001 7570 aaKnown RBP5.37□□□□□ -1.55
RTN4-211ENST00000438462 NOL3O60936 208 aaKnown RBP5.36□□□□□ -1.55
RTN4-211ENST00000438462 IL15RAQ13261 267 aa5.36□□□□□ -1.55
RTN4-211ENST00000438462 C6orf99Q4VX62 202 aa5.36□□□□□ -1.55
RTN4-211ENST00000438462 CKS1BP61024 79 aa5.35□□□□□ -1.55
RTN4-211ENST00000438462 SMAGPQ0VAQ4 97 aa5.35□□□□□ -1.55
RTN4-211ENST00000438462 GAGE2AQ6NT46 116 aa5.35□□□□□ -1.55
RTN4-211ENST00000438462 AHNAK2Q8IVF2 5795 aa5.34□□□□□ -1.55
RTN4-211ENST00000438462 INMT-MINDY4F8WBC2 141 aa5.34□□□□□ -1.55
RTN4-211ENST00000438462 AKR1C3P42330 323 aa5.34□□□□□ -1.55
RTN4-211ENST00000438462 ATP11AUNQ6ZP68 121 aa5.34□□□□□ -1.55
RTN4-211ENST00000438462 SMIM3Q9BZL3 60 aa5.34□□□□□ -1.55
RTN4-211ENST00000438462 TRBV6-5A0A0K0K1A5 114 aa5.33□□□□□ -1.56
RTN4-211ENST00000438462 FAM74A7A6NL05 159 aa5.33□□□□□ -1.56
RTN4-211ENST00000438462 PRSS2P07478 247 aa5.33□□□□□ -1.56
RTN4-211ENST00000438462 FHITP49789 147 aa5.33□□□□□ -1.56
RTN4-211ENST00000438462 FAM19A3Q7Z5A8 133 aa5.33□□□□□ -1.56
RTN4-211ENST00000438462 TOMM7Q9P0U1 55 aa5.33□□□□□ -1.56
RTN4-211ENST00000438462 IFNA1P01562 189 aa5.32□□□□□ -1.56
RTN4-211ENST00000438462 C9orf153Q5TBE3 101 aa5.32□□□□□ -1.56
RTN4-211ENST00000438462 IFITM10A6NMD0 228 aa5.31□□□□□ -1.56
RTN4-211ENST00000438462 Q6ZVH6 145 aa5.31□□□□□ -1.56
RTN4-211ENST00000438462 DEDD2Q8WXF8 326 aa5.31□□□□□ -1.56
RTN4-211ENST00000438462 FAM210AQ96ND0 272 aa5.31□□□□□ -1.56
RTN4-211ENST00000438462 ST20Q9HBF5 79 aa5.31□□□□□ -1.56
RTN4-211ENST00000438462 KRTAP5-10Q6L8G5 202 aa5.3□□□□□ -1.56
RTN4-211ENST00000438462 HRCT1Q6UXD1 115 aa5.3□□□□□ -1.56
RTN4-211ENST00000438462 SMCR5Q8TEV8 140 aa5.3□□□□□ -1.56
RTN4-211ENST00000438462 NKX6-2Q9C056 277 aaPredicted RBP5.3□□□□□ -1.56
RTN4-211ENST00000438462 FXYD6-FXYD2A0A087WZ82 144 aa5.29□□□□□ -1.56
RTN4-211ENST00000438462 F2Z2F3 143 aa5.29□□□□□ -1.56
RTN4-211ENST00000438462 FCER1GP30273 86 aa5.29□□□□□ -1.56
RTN4-211ENST00000438462 TWIST1Q15672 202 aa5.29□□□□□ -1.56
RTN4-211ENST00000438462 TEX261Q6UWH6 196 aa5.29□□□□□ -1.56
RTN4-211ENST00000438462 AKAP14Q86UN6 197 aa5.29□□□□□ -1.56
RTN4-211ENST00000438462 NRACQ8N912 160 aa5.29□□□□□ -1.56
RTN4-211ENST00000438462 FAM104AQ969W3 186 aa5.29□□□□□ -1.56
RTN4-211ENST00000438462 TIMM21Q9BVV7 248 aa5.29□□□□□ -1.56
RTN4-211ENST00000438462 HSPB11Q9Y547 144 aa5.29□□□□□ -1.56
RTN4-211ENST00000438462 TRBV27A0A0K0K1C4 114 aa5.28□□□□□ -1.56
RTN4-211ENST00000438462 F8VRH5 84 aa5.28□□□□□ -1.56
RTN4-211ENST00000438462 HBBP68871 147 aa5.28□□□□□ -1.56
RTN4-211ENST00000438462 C6orf226Q5I0X4 101 aa5.28□□□□□ -1.56
RTN4-211ENST00000438462 STOML3Q8TAV4 291 aa5.28□□□□□ -1.56
RTN4-211ENST00000438462 VCX3BQ9H321 246 aa5.28□□□□□ -1.56
RTN4-211ENST00000438462 MED9Q9NWA0 146 aa5.28□□□□□ -1.56
RTN4-211ENST00000438462 TAGLN2P37802 199 aaKnown RBP5.27□□□□□ -1.57
RTN4-211ENST00000438462 POLR2KP53803 58 aaKnown RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms