RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 NDUFV3P56181 108 aaKnown RBP6.78□□□□□ -1.32
CUX1-206ENST00000437600 MEIG1Q5JSS6 88 aa6.78□□□□□ -1.32
CUX1-206ENST00000437600 PAPPA-AS1Q5QFB9 102 aa6.78□□□□□ -1.32
CUX1-206ENST00000437600 NDUFA11Q86Y39 141 aa6.78□□□□□ -1.32
CUX1-206ENST00000437600 ANKRD29Q8N6D5 301 aa6.78□□□□□ -1.32
CUX1-206ENST00000437600 UBE2D4Q9Y2X8 147 aa6.78□□□□□ -1.32
CUX1-206ENST00000437600 CDKN2A-AS1Q9UH64 79 aa6.77□□□□□ -1.33
CUX1-206ENST00000437600 SCGB1C2P0DMR2 95 aa6.77□□□□□ -1.33
CUX1-206ENST00000437600 TRGV2A0A075B6R0 118 aa6.76□□□□□ -1.33
CUX1-206ENST00000437600 TIMM21Q9BVV7 248 aa6.76□□□□□ -1.33
CUX1-206ENST00000437600 SPANXA1Q9NS26 97 aa6.76□□□□□ -1.33
CUX1-206ENST00000437600 UBE2D3P61077 147 aa6.76□□□□□ -1.33
CUX1-206ENST00000437600 UBE2D2P62837 147 aa6.76□□□□□ -1.33
CUX1-206ENST00000437600 LYRM7Q5U5X0 104 aa6.76□□□□□ -1.33
CUX1-206ENST00000437600 NTM-AS1Q6ZSK4 140 aa6.76□□□□□ -1.33
CUX1-206ENST00000437600 LINC00482Q8N8I6 264 aa6.76□□□□□ -1.33
CUX1-206ENST00000437600 A8MTW9 85 aa6.76□□□□□ -1.33
CUX1-206ENST00000437600 UBE2D1P51668 147 aa6.76□□□□□ -1.33
CUX1-206ENST00000437600 C3orf56Q8N813 242 aa6.76□□□□□ -1.33
CUX1-206ENST00000437600 LEPROTO15243 131 aa6.75□□□□□ -1.33
CUX1-206ENST00000437600 DEFB130BP0DP73 79 aa6.75□□□□□ -1.33
CUX1-206ENST00000437600 DEFB130AP0DP74 79 aa6.75□□□□□ -1.33
CUX1-206ENST00000437600 GAGE2BQ13066 116 aa6.75□□□□□ -1.33
CUX1-206ENST00000437600 GAGE2EQ4V326 116 aa6.75□□□□□ -1.33
CUX1-206ENST00000437600 C19orf73Q9NVV2 129 aa6.75□□□□□ -1.33
CUX1-206ENST00000437600 GAGE2DQ9UEU5 116 aa6.75□□□□□ -1.33
CUX1-206ENST00000437600 A0A0J9YXY3 114 aa6.75□□□□□ -1.33
CUX1-206ENST00000437600 TMEM262E9PQX1 116 aa6.75□□□□□ -1.33
CUX1-206ENST00000437600 DEFB4AO15263 64 aa6.75□□□□□ -1.33
CUX1-206ENST00000437600 SNCGO76070 127 aa6.75□□□□□ -1.33
CUX1-206ENST00000437600 TRAV4A0A0B4J268 109 aa6.74□□□□□ -1.33
CUX1-206ENST00000437600 OR13C6PQ8NH95 151 aa6.74□□□□□ -1.33
CUX1-206ENST00000437600 NDUFA12Q9UI09 145 aa6.74□□□□□ -1.33
CUX1-206ENST00000437600 A0A096LPF7 62 aa6.74□□□□□ -1.33
CUX1-206ENST00000437600 RS1O15537 224 aa6.74□□□□□ -1.33
CUX1-206ENST00000437600 TTC32Q5I0X7 151 aa6.74□□□□□ -1.33
CUX1-206ENST00000437600 MRPS36P82909 103 aaKnown RBP6.74□□□□□ -1.33
CUX1-206ENST00000437600 Q1RN00 199 aa6.74□□□□□ -1.33
CUX1-206ENST00000437600 BEAN1Q3B7T3 259 aa6.74□□□□□ -1.33
CUX1-206ENST00000437600 C9JAW5 83 aa6.73□□□□□ -1.33
CUX1-206ENST00000437600 PRO1854Q9UHT4 67 aa6.73□□□□□ -1.33
CUX1-206ENST00000437600 SLC25A20O43772 301 aa6.73□□□□□ -1.33
CUX1-206ENST00000437600 IFITM1P13164 125 aa6.72□□□□□ -1.33
CUX1-206ENST00000437600 TMEM101Q96IK0 257 aa6.72□□□□□ -1.33
CUX1-206ENST00000437600 MDFIQ99750 246 aa6.72□□□□□ -1.33
CUX1-206ENST00000437600 PYGO1Q9Y3Y4 419 aa6.72□□□□□ -1.33
CUX1-206ENST00000437600 IGHV1-58A0A0C4DH39 117 aa6.72□□□□□ -1.33
CUX1-206ENST00000437600 PLAC8L1A1L4L8 177 aa6.71□□□□□ -1.33
CUX1-206ENST00000437600 J3KT08 172 aa6.71□□□□□ -1.33
CUX1-206ENST00000437600 RPL36AP83881 106 aaKnown RBP6.71□□□□□ -1.33
CUX1-206ENST00000437600 RPL36ALQ969Q0 106 aaKnown RBP6.71□□□□□ -1.33
CUX1-206ENST00000437600 VSIG2Q96IQ7 327 aa6.71□□□□□ -1.33
CUX1-206ENST00000437600 LINC00242Q5T6M2 205 aa6.71□□□□□ -1.34
CUX1-206ENST00000437600 SBSPONQ8IVN8 264 aa6.71□□□□□ -1.34
CUX1-206ENST00000437600 TMEM263Q8WUH6 116 aaKnown RBP6.71□□□□□ -1.34
CUX1-206ENST00000437600 TENM3Q9P273 2699 aa6.71□□□□□ -1.34
CUX1-206ENST00000437600 TRGV4A0A0C4DH28 118 aa6.71□□□□□ -1.34
CUX1-206ENST00000437600 NTN5Q8WTR8 489 aaPredicted RBP6.71□□□□□ -1.34
CUX1-206ENST00000437600 EDA2RQ9HAV5 297 aa6.71□□□□□ -1.34
CUX1-206ENST00000437600 K7EQD1 137 aa6.7□□□□□ -1.34
CUX1-206ENST00000437600 LITAFQ99732 161 aa6.7□□□□□ -1.34
CUX1-206ENST00000437600 OXLD1Q5BKU9 147 aa6.7□□□□□ -1.34
CUX1-206ENST00000437600 TINCRA0A1B0GVN0 87 aa6.69□□□□□ -1.34
CUX1-206ENST00000437600 IGHV3-33P01772 117 aa6.69□□□□□ -1.34
CUX1-206ENST00000437600 Q9H8V8 135 aa6.69□□□□□ -1.34
CUX1-206ENST00000437600 CSNK1G2-AS1Q8NCQ2 148 aa6.69□□□□□ -1.34
CUX1-206ENST00000437600 TOMM7Q9P0U1 55 aa6.69□□□□□ -1.34
CUX1-206ENST00000437600 IGLV4-60A0A075B6I1 120 aa6.68□□□□□ -1.34
CUX1-206ENST00000437600 CLPSL2Q6UWE3 100 aa6.68□□□□□ -1.34
CUX1-206ENST00000437600 C15orf53Q8NAA6 179 aa6.68□□□□□ -1.34
CUX1-206ENST00000437600 TEX49A0A1B0GTD5 131 aa6.68□□□□□ -1.34
CUX1-206ENST00000437600 DEFB135Q30KP9 77 aa6.68□□□□□ -1.34
CUX1-206ENST00000437600 COL7A1Q02388 2944 aa6.67□□□□□ -1.34
CUX1-206ENST00000437600 TRAV8-4A0A0B4J246 113 aa6.67□□□□□ -1.34
CUX1-206ENST00000437600 UBE2L6O14933 153 aa6.67□□□□□ -1.34
CUX1-206ENST00000437600 IL17DQ8TAD2 202 aa6.67□□□□□ -1.34
CUX1-206ENST00000437600 CLEC2BQ92478 149 aa6.67□□□□□ -1.34
CUX1-206ENST00000437600 C11orf68Q9H3H3 251 aaKnown RBP6.67□□□□□ -1.34
CUX1-206ENST00000437600 CDC42SE2Q9NRR3 84 aa6.67□□□□□ -1.34
CUX1-206ENST00000437600 CHCHD5Q9BSY4 110 aa6.66□□□□□ -1.34
CUX1-206ENST00000437600 TRIAP1O43715 76 aa6.66□□□□□ -1.34
CUX1-206ENST00000437600 PIK3CD-AS1Q5SR53 167 aa6.66□□□□□ -1.34
CUX1-206ENST00000437600 C1orf43Q9BWL3 253 aa6.66□□□□□ -1.34
CUX1-206ENST00000437600 PRB2P02812 416 aaPredicted RBP6.66□□□□□ -1.34
CUX1-206ENST00000437600 HRCT1Q6UXD1 115 aa6.66□□□□□ -1.34
CUX1-206ENST00000437600 DNAH3Q8TD57 4116 aa6.65□□□□□ -1.34
CUX1-206ENST00000437600 A0A1B0GX51 115 aa6.65□□□□□ -1.34
CUX1-206ENST00000437600 FHL2Q14192 279 aa6.65□□□□□ -1.34
CUX1-206ENST00000437600 C9orf66Q5T8R8 295 aa6.65□□□□□ -1.34
CUX1-206ENST00000437600 C5orf38Q86SI9 138 aa6.65□□□□□ -1.34
CUX1-206ENST00000437600 Q8N3U1 123 aa6.65□□□□□ -1.34
CUX1-206ENST00000437600 V9GYY9 64 aa6.65□□□□□ -1.34
CUX1-206ENST00000437600 SMIM1B2RUZ4 78 aa6.65□□□□□ -1.35
CUX1-206ENST00000437600 DAZ2Q13117 558 aaKnown RBP6.65□□□□□ -1.35
CUX1-206ENST00000437600 DAZ4Q86SG3 579 aaKnown RBP6.65□□□□□ -1.35
CUX1-206ENST00000437600 C16orf74Q96GX8 76 aa6.65□□□□□ -1.35
CUX1-206ENST00000437600 DAZ3Q9NR90 486 aaKnown RBP6.65□□□□□ -1.35
CUX1-206ENST00000437600 CMC4P56277 68 aaPredicted RBP6.64□□□□□ -1.35
CUX1-206ENST00000437600 C4orf26Q17RF5 130 aa6.64□□□□□ -1.35
CUX1-206ENST00000437600 LINC01620Q4KN68 170 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 185.4 ms