RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 PRR15LQ9BU68 103 aa11.58□□□□□ -0.55
PTPN13-204ENST00000436978 LRRK2Q5S007 2527 aa11.58□□□□□ -0.56
PTPN13-204ENST00000436978 CHCHD7Q9BUK0 85 aa11.58□□□□□ -0.56
PTPN13-204ENST00000436978 LOC100131303A0A0U1RQF7 123 aa11.58□□□□□ -0.56
PTPN13-204ENST00000436978 NOTCH2Q04721 2471 aa11.58□□□□□ -0.56
PTPN13-204ENST00000436978 ATP5EP56381 51 aaPredicted RBP11.58□□□□□ -0.56
PTPN13-204ENST00000436978 A0A096LNI7 61 aa11.57□□□□□ -0.56
PTPN13-204ENST00000436978 SLPIP03973 132 aa11.57□□□□□ -0.56
PTPN13-204ENST00000436978 WFDC10BQ8IUB3 73 aa11.57□□□□□ -0.56
PTPN13-204ENST00000436978 M0R2N4 97 aa11.57□□□□□ -0.56
PTPN13-204ENST00000436978 CDSNQ15517 529 aa11.57□□□□□ -0.56
PTPN13-204ENST00000436978 C1orf158Q8N1D5 194 aa11.57□□□□□ -0.56
PTPN13-204ENST00000436978 POLR2KP53803 58 aaKnown RBP11.56□□□□□ -0.56
PTPN13-204ENST00000436978 ENHOQ6UWT2 76 aa11.56□□□□□ -0.56
PTPN13-204ENST00000436978 NDUFV3P56181 108 aaKnown RBP11.56□□□□□ -0.56
PTPN13-204ENST00000436978 YPEL4Q96NS1 127 aa11.56□□□□□ -0.56
PTPN13-204ENST00000436978 MAPKAPK5-AS1Q8N8E1 139 aa11.56□□□□□ -0.56
PTPN13-204ENST00000436978 PLAC8L1A1L4L8 177 aa11.55□□□□□ -0.56
PTPN13-204ENST00000436978 F8WDY8 70 aa11.55□□□□□ -0.56
PTPN13-204ENST00000436978 UQCRQO14949 82 aa11.55□□□□□ -0.56
PTPN13-204ENST00000436978 CACNA1AO00555 2505 aa11.55□□□□□ -0.56
PTPN13-204ENST00000436978 COL4A2P08572 1712 aa11.55□□□□□ -0.56
PTPN13-204ENST00000436978 CDC42SE2Q9NRR3 84 aa11.55□□□□□ -0.56
PTPN13-204ENST00000436978 ABCA2Q9BZC7 2435 aa11.55□□□□□ -0.56
PTPN13-204ENST00000436978 IGLV1-51P01701 117 aa11.55□□□□□ -0.56
PTPN13-204ENST00000436978 NDUFC1O43677 76 aa11.55□□□□□ -0.56
PTPN13-204ENST00000436978 C10orf25Q5T742 122 aa11.54□□□□□ -0.56
PTPN13-204ENST00000436978 K7ERS5 55 aa11.54□□□□□ -0.56
PTPN13-204ENST00000436978 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.54□□□□□ -0.56
PTPN13-204ENST00000436978 ZNF73O43830 326 aaPredicted RBP11.53□□□□□ -0.56
PTPN13-204ENST00000436978 RNASE8Q8TDE3 154 aaKnown RBP11.53□□□□□ -0.56
PTPN13-204ENST00000436978 C3orf84H3BNL1 204 aa11.52□□□□□ -0.56
PTPN13-204ENST00000436978 C11orf21Q9P2W6 132 aa11.52□□□□□ -0.56
PTPN13-204ENST00000436978 NAV2Q8IVL1 2488 aa11.52□□□□□ -0.57
PTPN13-204ENST00000436978 SMIM11BQ8TCY0 68 aa11.52□□□□□ -0.57
PTPN13-204ENST00000436978 OXLD1Q5BKU9 147 aa11.51□□□□□ -0.57
PTPN13-204ENST00000436978 MRPL55Q7Z7F7 128 aaKnown RBP11.51□□□□□ -0.57
PTPN13-204ENST00000436978 RPL28P46779 137 aaKnown RBP11.51□□□□□ -0.57
PTPN13-204ENST00000436978 AVPP01185 164 aa11.51□□□□□ -0.57
PTPN13-204ENST00000436978 IMUPQ9GZP8 106 aa11.5□□□□□ -0.57
PTPN13-204ENST00000436978 RPL37AP8A6NKH3 93 aa11.5□□□□□ -0.57
PTPN13-204ENST00000436978 LST1O00453 97 aa11.5□□□□□ -0.57
PTPN13-204ENST00000436978 IGF2RP11717 2491 aa11.5□□□□□ -0.57
PTPN13-204ENST00000436978 CCDC168Q8NDH2 2452 aa11.49□□□□□ -0.57
PTPN13-204ENST00000436978 V9GYY9 64 aa11.49□□□□□ -0.57
PTPN13-204ENST00000436978 MRPS12O15235 138 aaKnown RBP11.49□□□□□ -0.57
PTPN13-204ENST00000436978 SMR3AQ99954 134 aa11.49□□□□□ -0.57
PTPN13-204ENST00000436978 PIEZO1Q92508 2521 aa11.49□□□□□ -0.57
PTPN13-204ENST00000436978 FAM236DA0A1B0GTK5 79 aa11.49□□□□□ -0.57
PTPN13-204ENST00000436978 FAM236CP0DP71 79 aa11.49□□□□□ -0.57
PTPN13-204ENST00000436978 ODF3L2Q3SX64 289 aa11.49□□□□□ -0.57
PTPN13-204ENST00000436978 SCXQ7RTU7 201 aa11.48□□□□□ -0.57
PTPN13-204ENST00000436978 C3orf22Q8N5N4 141 aa11.48□□□□□ -0.57
PTPN13-204ENST00000436978 Q6ZQY7 126 aa11.48□□□□□ -0.57
PTPN13-204ENST00000436978 CYSRT1A8MQ03 144 aa11.48□□□□□ -0.57
PTPN13-204ENST00000436978 EGFEM1PQ0D2K5 195 aa11.48□□□□□ -0.57
PTPN13-204ENST00000436978 IGLV9-49A0A0B4J1Y8 123 aa11.47□□□□□ -0.57
PTPN13-204ENST00000436978 REG3GQ6UW15 175 aa11.47□□□□□ -0.57
PTPN13-204ENST00000436978 A8MZ25 164 aa11.46□□□□□ -0.57
PTPN13-204ENST00000436978 M0QXV9 152 aa11.46□□□□□ -0.57
PTPN13-204ENST00000436978 HRCT1Q6UXD1 115 aa11.46□□□□□ -0.57
PTPN13-204ENST00000436978 PPDPFQ9H3Y8 114 aa11.46□□□□□ -0.57
PTPN13-204ENST00000436978 IGIPA6NJ69 53 aa11.46□□□□□ -0.57
PTPN13-204ENST00000436978 CSDC2Q9Y534 153 aaKnown RBP11.46□□□□□ -0.57
PTPN13-204ENST00000436978 IGLV5-52A0A0A0MRZ9 124 aa11.46□□□□□ -0.58
PTPN13-204ENST00000436978 LINC00526Q96FQ7 95 aa11.45□□□□□ -0.58
PTPN13-204ENST00000436978 PRM2P04554 102 aa11.45□□□□□ -0.58
PTPN13-204ENST00000436978 SPINK6Q6UWN8 80 aa11.45□□□□□ -0.58
PTPN13-204ENST00000436978 C20orf197Q8N268 126 aa11.45□□□□□ -0.58
PTPN13-204ENST00000436978 MYO18BQ8IUG5 2567 aa11.45□□□□□ -0.58
PTPN13-204ENST00000436978 C2orf91Q6ZV80 131 aa11.45□□□□□ -0.58
PTPN13-204ENST00000436978 MT-ATP8P03928 68 aa11.44□□□□□ -0.58
PTPN13-204ENST00000436978 FAM19A3Q7Z5A8 133 aa11.44□□□□□ -0.58
PTPN13-204ENST00000436978 NDUFC2-KCTD14E9PQ53 114 aa11.43□□□□□ -0.58
PTPN13-204ENST00000436978 KRTAP10-9P60411 292 aa11.43□□□□□ -0.58
PTPN13-204ENST00000436978 NHLRC4P0CG21 123 aaPredicted RBP11.43□□□□□ -0.58
PTPN13-204ENST00000436978 SPTSSBQ8NFR3 76 aa11.43□□□□□ -0.58
PTPN13-204ENST00000436978 FHL2Q14192 279 aa11.42□□□□□ -0.58
PTPN13-204ENST00000436978 COX8CQ7Z4L0 72 aa11.42□□□□□ -0.58
PTPN13-204ENST00000436978 BRK1Q8WUW1 75 aa11.42□□□□□ -0.58
PTPN13-204ENST00000436978 LINC00242Q5T6M2 205 aa11.4□□□□□ -0.58
PTPN13-204ENST00000436978 LINC01561Q8N1V8 128 aa11.4□□□□□ -0.58
PTPN13-204ENST00000436978 A0A1B0GUV1 79 aa11.4□□□□□ -0.58
PTPN13-204ENST00000436978 EDN2P20800 178 aa11.4□□□□□ -0.59
PTPN13-204ENST00000436978 RETNQ9HD89 108 aa11.39□□□□□ -0.59
PTPN13-204ENST00000436978 BEAN1Q3B7T3 259 aa11.39□□□□□ -0.59
PTPN13-204ENST00000436978 SERP2Q8N6R1 65 aa11.39□□□□□ -0.59
PTPN13-204ENST00000436978 POM121L12Q8N7R1 296 aa11.38□□□□□ -0.59
PTPN13-204ENST00000436978 SMIM1B2RUZ4 78 aa11.38□□□□□ -0.59
PTPN13-204ENST00000436978 Q8N814 137 aa11.38□□□□□ -0.59
PTPN13-204ENST00000436978 TLN1Q9Y490 2541 aaKnown RBP11.37□□□□□ -0.59
PTPN13-204ENST00000436978 PRYO14603 147 aa11.37□□□□□ -0.59
PTPN13-204ENST00000436978 Q6ZTC4 211 aa11.37□□□□□ -0.59
PTPN13-204ENST00000436978 SERP1Q9Y6X1 66 aa11.37□□□□□ -0.59
PTPN13-204ENST00000436978 MYO9AB2RTY4 2548 aa11.37□□□□□ -0.59
PTPN13-204ENST00000436978 MPLKIPQ8TAP9 179 aa11.37□□□□□ -0.59
PTPN13-204ENST00000436978 MUC4Q99102 2169 aa11.37□□□□□ -0.59
PTPN13-204ENST00000436978 GAS8-AS1O95177 125 aa11.37□□□□□ -0.59
PTPN13-204ENST00000436978 C2orf48Q96LS8 159 aa11.37□□□□□ -0.59
PTPN13-204ENST00000436978 Q6JHZ5 121 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms