RNA–Protein interactions for RNA: ENST00000435781.5

GTF3A-203, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-203ENST00000435781 C5orf38Q86SI9 138 aa13.48□□□□□ -0.25
GTF3A-203ENST00000435781 LINC00526Q96FQ7 95 aa13.48□□□□□ -0.25
GTF3A-203ENST00000435781 IGHV3-64A0A075B6Q5 118 aa13.47□□□□□ -0.25
GTF3A-203ENST00000435781 TEX43Q6ZNM6 134 aa13.47□□□□□ -0.25
GTF3A-203ENST00000435781 TOMM6Q96B49 74 aa13.47□□□□□ -0.25
GTF3A-203ENST00000435781 IGHV3OR16-9A0A0B4J2B5 98 aa13.46□□□□□ -0.25
GTF3A-203ENST00000435781 EPM2AB3EWF7 344 aa13.46□□□□□ -0.25
GTF3A-203ENST00000435781 NPSP0C0P6 89 aa13.46□□□□□ -0.25
GTF3A-203ENST00000435781 Q6ZN92 141 aa13.46□□□□□ -0.25
GTF3A-203ENST00000435781 LINC00173Q6ZV60 143 aa13.46□□□□□ -0.25
GTF3A-203ENST00000435781 SRRM2Q9UQ35 2752 aaKnown RBP13.45□□□□□ -0.26
GTF3A-203ENST00000435781 ZC2HC1BQ5TFG8 222 aa13.45□□□□□ -0.26
GTF3A-203ENST00000435781 FA2HQ7L5A8 372 aa13.45□□□□□ -0.26
GTF3A-203ENST00000435781 CBLN2Q8IUK8 224 aa13.45□□□□□ -0.26
GTF3A-203ENST00000435781 AMELXQ99217 191 aa13.45□□□□□ -0.26
GTF3A-203ENST00000435781 ZNF561-AS1K7EIQ3 104 aa13.44□□□□□ -0.26
GTF3A-203ENST00000435781 Q5VSD8 79 aa13.44□□□□□ -0.26
GTF3A-203ENST00000435781 CIRBP-AS1Q8TBR5 109 aa13.44□□□□□ -0.26
GTF3A-203ENST00000435781 TIMM17AQ99595 171 aa13.44□□□□□ -0.26
GTF3A-203ENST00000435781 C2orf88Q9BSF0 95 aa13.44□□□□□ -0.26
GTF3A-203ENST00000435781 VCX2Q9H322 139 aa13.44□□□□□ -0.26
GTF3A-203ENST00000435781 SMCO4Q9NRQ5 59 aa13.44□□□□□ -0.26
GTF3A-203ENST00000435781 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.44□□□□□ -0.26
GTF3A-203ENST00000435781 PANO1I0J062 215 aa13.43□□□□□ -0.26
GTF3A-203ENST00000435781 APOMO95445 188 aa13.43□□□□□ -0.26
GTF3A-203ENST00000435781 UBE2D1P51668 147 aa13.43□□□□□ -0.26
GTF3A-203ENST00000435781 LINC00242Q5T6M2 205 aa13.43□□□□□ -0.26
GTF3A-203ENST00000435781 C18orf32Q8TCD1 76 aa13.43□□□□□ -0.26
GTF3A-203ENST00000435781 IGLV4-69A0A075B6H9 119 aa13.41□□□□□ -0.26
GTF3A-203ENST00000435781 COX6A2Q02221 97 aa13.41□□□□□ -0.26
GTF3A-203ENST00000435781 PAPPA-AS1Q5QFB9 102 aa13.41□□□□□ -0.26
GTF3A-203ENST00000435781 ERASQ7Z444 233 aa13.41□□□□□ -0.26
GTF3A-203ENST00000435781 CARD19Q96LW7 228 aa13.41□□□□□ -0.26
GTF3A-203ENST00000435781 SCGB3A1Q96QR1 104 aa13.41□□□□□ -0.26
GTF3A-203ENST00000435781 FAM229AH3BQW9 127 aa13.4□□□□□ -0.26
GTF3A-203ENST00000435781 SYCNQ0VAF6 134 aa13.4□□□□□ -0.26
GTF3A-203ENST00000435781 CIRBPQ14011 172 aaKnown RBP13.4□□□□□ -0.26
GTF3A-203ENST00000435781 LINC01549A6NIU2 74 aa13.39□□□□□ -0.27
GTF3A-203ENST00000435781 CHTF8P0CG12 524 aa13.39□□□□□ -0.27
GTF3A-203ENST00000435781 SPAG11BQ08648 103 aa13.39□□□□□ -0.27
GTF3A-203ENST00000435781 LINC00528Q8N1L1 170 aa13.39□□□□□ -0.27
GTF3A-203ENST00000435781 OR10D4PQ8NGN7 298 aa13.39□□□□□ -0.27
GTF3A-203ENST00000435781 URB1-AS1Q96HZ7 61 aa13.39□□□□□ -0.27
GTF3A-203ENST00000435781 A0A087WZ39 114 aa13.38□□□□□ -0.27
GTF3A-203ENST00000435781 ORAOV1Q8WV07 137 aa13.38□□□□□ -0.27
GTF3A-203ENST00000435781 FAM19A3Q7Z5A8 133 aa13.37□□□□□ -0.27
GTF3A-203ENST00000435781 C2orf48Q96LS8 159 aa13.37□□□□□ -0.27
GTF3A-203ENST00000435781 LINC00614P0C842 121 aa13.36□□□□□ -0.27
GTF3A-203ENST00000435781 Q6ZRU5 148 aa13.36□□□□□ -0.27
GTF3A-203ENST00000435781 SPACA4Q8TDM5 124 aa13.36□□□□□ -0.27
GTF3A-203ENST00000435781 CAMK2N2Q96S95 79 aa13.36□□□□□ -0.27
GTF3A-203ENST00000435781 A0A096LNJ9 63 aa13.34□□□□□ -0.27
GTF3A-203ENST00000435781 A0A096LNI7 61 aa13.33□□□□□ -0.28
GTF3A-203ENST00000435781 RAB5BP61020 215 aa13.33□□□□□ -0.28
GTF3A-203ENST00000435781 LINC01561Q8N1V8 128 aa13.33□□□□□ -0.28
GTF3A-203ENST00000435781 PKIGQ9Y2B9 76 aa13.33□□□□□ -0.28
GTF3A-203ENST00000435781 A0A087WYN8 130 aa13.32□□□□□ -0.28
GTF3A-203ENST00000435781 IGKV2-24A0A0C4DH68 120 aa13.32□□□□□ -0.28
GTF3A-203ENST00000435781 SEC11AP67812 179 aa13.32□□□□□ -0.28
GTF3A-203ENST00000435781 DPH3Q96FX2 82 aa13.32□□□□□ -0.28
GTF3A-203ENST00000435781 A0A0J9YXV3 536 aa13.31□□□□□ -0.28
GTF3A-203ENST00000435781 HBDP02042 147 aa13.31□□□□□ -0.28
GTF3A-203ENST00000435781 HERVK_113P63121 156 aa13.31□□□□□ -0.28
GTF3A-203ENST00000435781 PMCHL1Q16048 86 aa13.31□□□□□ -0.28
GTF3A-203ENST00000435781 CST9LQ9H4G1 147 aa13.31□□□□□ -0.28
GTF3A-203ENST00000435781 FLG2Q5D862 2391 aaPredicted RBP13.31□□□□□ -0.28
GTF3A-203ENST00000435781 F8WDY8 70 aa13.3□□□□□ -0.28
GTF3A-203ENST00000435781 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.3□□□□□ -0.28
GTF3A-203ENST00000435781 PLA2G1BP04054 148 aaKnown RBP13.3□□□□□ -0.28
GTF3A-203ENST00000435781 KIAA0087Q14695 138 aa13.3□□□□□ -0.28
GTF3A-203ENST00000435781 MAJINQ3KP22 176 aa13.3□□□□□ -0.28
GTF3A-203ENST00000435781 GEMIN7Q9H840 131 aaKnown RBP13.3□□□□□ -0.28
GTF3A-203ENST00000435781 LOC107984640A0A0U1RRK4 108 aa13.29□□□□□ -0.28
GTF3A-203ENST00000435781 NDUFA1O15239 70 aa13.29□□□□□ -0.28
GTF3A-203ENST00000435781 PMVKQ15126 192 aa13.29□□□□□ -0.28
GTF3A-203ENST00000435781 CDKN2A-AS1Q9UH64 79 aa13.29□□□□□ -0.28
GTF3A-203ENST00000435781 TRGC2P03986 189 aa13.28□□□□□ -0.28
GTF3A-203ENST00000435781 INAFM2P0DMQ5 153 aa13.28□□□□□ -0.28
GTF3A-203ENST00000435781 RNF151Q2KHN1 245 aa13.28□□□□□ -0.28
GTF3A-203ENST00000435781 MRPL35Q9NZE8 188 aaKnown RBP13.28□□□□□ -0.28
GTF3A-203ENST00000435781 PLAC8Q9NZF1 115 aa13.28□□□□□ -0.28
GTF3A-203ENST00000435781 TINCRA0A1B0GVN0 87 aa13.27□□□□□ -0.29
GTF3A-203ENST00000435781 COLCA2A8K830 154 aa13.27□□□□□ -0.29
GTF3A-203ENST00000435781 PDZD11Q5EBL8 140 aa13.27□□□□□ -0.29
GTF3A-203ENST00000435781 C10orf25Q5T742 122 aa13.27□□□□□ -0.29
GTF3A-203ENST00000435781 UNQ6190/PRO20217Q6UXQ8 127 aa13.27□□□□□ -0.29
GTF3A-203ENST00000435781 LINC00474Q9P2X8 69 aa13.27□□□□□ -0.29
GTF3A-203ENST00000435781 PTTG1IPP53801 180 aa13.26□□□□□ -0.29
GTF3A-203ENST00000435781 LINC00469Q8N7U9 141 aa13.26□□□□□ -0.29
GTF3A-203ENST00000435781 CHCHD1Q96BP2 118 aaKnown RBP13.26□□□□□ -0.29
GTF3A-203ENST00000435781 KRTAP10-4P60372 401 aaPredicted RBP13.25□□□□□ -0.29
GTF3A-203ENST00000435781 STPG4Q8N801 248 aa13.25□□□□□ -0.29
GTF3A-203ENST00000435781 IGLV5-45A0A087WSX0 123 aa13.24□□□□□ -0.29
GTF3A-203ENST00000435781 GAGE2BQ13066 116 aa13.24□□□□□ -0.29
GTF3A-203ENST00000435781 PACRGQ96M98 296 aaPredicted RBP13.24□□□□□ -0.29
GTF3A-203ENST00000435781 C6orf48Q9UBA6 75 aa13.24□□□□□ -0.29
GTF3A-203ENST00000435781 ATP5LO75964 103 aa13.23□□□□□ -0.29
GTF3A-203ENST00000435781 C2orf82Q6UX34 121 aa13.23□□□□□ -0.29
GTF3A-203ENST00000435781 TOMM7Q9P0U1 55 aa13.23□□□□□ -0.29
GTF3A-203ENST00000435781 SCO1O75880 301 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms