RNA–Protein interactions for RNA: ENST00000431374.6

TSPAN9-203, Transcript of tetraspanin 9, humanhuman

TSL 4

Gene TSPAN9, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-203ENST00000431374 LINC00587B1AMM8 73 aa9.86□□□□□ -0.83
TSPAN9-203ENST00000431374 CCL25O15444 150 aa9.86□□□□□ -0.83
TSPAN9-203ENST00000431374 SMAGPQ0VAQ4 97 aa9.86□□□□□ -0.83
TSPAN9-203ENST00000431374 TMEM136Q6ZRR5 245 aa9.86□□□□□ -0.83
TSPAN9-203ENST00000431374 CIRBP-AS1Q8TBR5 109 aa9.86□□□□□ -0.83
TSPAN9-203ENST00000431374 SRRM2Q9UQ35 2752 aaKnown RBP9.86□□□□□ -0.83
TSPAN9-203ENST00000431374 INAFM2P0DMQ5 153 aa9.85□□□□□ -0.83
TSPAN9-203ENST00000431374 SDIM1Q6ZPB5 146 aa9.85□□□□□ -0.83
TSPAN9-203ENST00000431374 LINC00528Q8N1L1 170 aa9.85□□□□□ -0.83
TSPAN9-203ENST00000431374 TIMM21Q9BVV7 248 aa9.85□□□□□ -0.83
TSPAN9-203ENST00000431374 HERC1Q15751 4861 aa9.84□□□□□ -0.83
TSPAN9-203ENST00000431374 GVQW2A0A096LPI5 108 aaPredicted RBP9.84□□□□□ -0.83
TSPAN9-203ENST00000431374 SS18Q15532 418 aa9.84□□□□□ -0.83
TSPAN9-203ENST00000431374 HIGD2BQ4VC39 106 aa9.84□□□□□ -0.83
TSPAN9-203ENST00000431374 PDZD11Q5EBL8 140 aa9.84□□□□□ -0.83
TSPAN9-203ENST00000431374 Q6ZUT4 128 aa9.84□□□□□ -0.83
TSPAN9-203ENST00000431374 PRELID3AQ96N28 172 aa9.84□□□□□ -0.83
TSPAN9-203ENST00000431374 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.83□□□□□ -0.84
TSPAN9-203ENST00000431374 RPL39P62891 51 aaKnown RBP9.83□□□□□ -0.84
TSPAN9-203ENST00000431374 LBHQ53QV2 105 aaPredicted RBP9.83□□□□□ -0.84
TSPAN9-203ENST00000431374 CD164L2Q6UWJ8 174 aa9.83□□□□□ -0.84
TSPAN9-203ENST00000431374 MRPL18Q9H0U6 180 aaKnown RBP9.83□□□□□ -0.84
TSPAN9-203ENST00000431374 IGHV3-64A0A075B6Q5 118 aa9.82□□□□□ -0.84
TSPAN9-203ENST00000431374 RNASE13Q5GAN3 156 aaKnown RBP9.82□□□□□ -0.84
TSPAN9-203ENST00000431374 LAMTOR2Q9Y2Q5 125 aa9.82□□□□□ -0.84
TSPAN9-203ENST00000431374 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.82□□□□□ -0.84
TSPAN9-203ENST00000431374 IGHV1-58A0A0C4DH39 117 aa9.81□□□□□ -0.84
TSPAN9-203ENST00000431374 PRSS47A8MTI9 375 aa9.81□□□□□ -0.84
TSPAN9-203ENST00000431374 PANO1I0J062 215 aa9.81□□□□□ -0.84
TSPAN9-203ENST00000431374 TRAV13-1A0A0B4J241 112 aa9.8□□□□□ -0.84
TSPAN9-203ENST00000431374 PLA2G1BP04054 148 aaKnown RBP9.8□□□□□ -0.84
TSPAN9-203ENST00000431374 FAM104AQ969W3 186 aa9.8□□□□□ -0.84
TSPAN9-203ENST00000431374 MAP1LC3AQ9H492 121 aa9.8□□□□□ -0.84
TSPAN9-203ENST00000431374 SPANXA1Q9NS26 97 aa9.8□□□□□ -0.84
TSPAN9-203ENST00000431374 PKHD1L1Q86WI1 4243 aa9.8□□□□□ -0.84
TSPAN9-203ENST00000431374 DDTP30046 118 aa9.79□□□□□ -0.84
TSPAN9-203ENST00000431374 CIRBPQ14011 172 aaKnown RBP9.79□□□□□ -0.84
TSPAN9-203ENST00000431374 FLG2Q5D862 2391 aaPredicted RBP9.78□□□□□ -0.84
TSPAN9-203ENST00000431374 LOC389332A0A1B0GUA5 103 aa9.78□□□□□ -0.84
TSPAN9-203ENST00000431374 MRPS36P82909 103 aaKnown RBP9.78□□□□□ -0.84
TSPAN9-203ENST00000431374 OPRPNQ99935 248 aaPredicted RBP9.78□□□□□ -0.84
TSPAN9-203ENST00000431374 COX7A2LO14548 114 aa9.77□□□□□ -0.85
TSPAN9-203ENST00000431374 CHTF8P0CG12 524 aa9.77□□□□□ -0.85
TSPAN9-203ENST00000431374 Q8N8P6 123 aa9.77□□□□□ -0.85
TSPAN9-203ENST00000431374 FAT3Q8TDW7 4589 aa9.77□□□□□ -0.85
TSPAN9-203ENST00000431374 KRTAP10-4P60372 401 aaPredicted RBP9.76□□□□□ -0.85
TSPAN9-203ENST00000431374 BAGE3Q86Y29 109 aa9.76□□□□□ -0.85
TSPAN9-203ENST00000431374 LINC00526Q96FQ7 95 aa9.76□□□□□ -0.85
TSPAN9-203ENST00000431374 MALP21145 153 aa9.75□□□□□ -0.85
TSPAN9-203ENST00000431374 COX6A2Q02221 97 aa9.75□□□□□ -0.85
TSPAN9-203ENST00000431374 SPACA4Q8TDM5 124 aa9.75□□□□□ -0.85
TSPAN9-203ENST00000431374 PYGO1Q9Y3Y4 419 aa9.75□□□□□ -0.85
TSPAN9-203ENST00000431374 ZNF561-AS1K7EIQ3 104 aa9.74□□□□□ -0.85
TSPAN9-203ENST00000431374 IFI27P40305 119 aaPredicted RBP9.74□□□□□ -0.85
TSPAN9-203ENST00000431374 C5orf38Q86SI9 138 aa9.74□□□□□ -0.85
TSPAN9-203ENST00000431374 PRSS3P2Q8NHM4 247 aa9.74□□□□□ -0.85
TSPAN9-203ENST00000431374 CARD19Q96LW7 228 aa9.74□□□□□ -0.85
TSPAN9-203ENST00000431374 DMBT1Q9UGM3 2413 aaPredicted RBP9.74□□□□□ -0.85
TSPAN9-203ENST00000431374 LRP1Q07954 4544 aaKnown RBP9.73□□□□□ -0.85
TSPAN9-203ENST00000431374 IGLV4-3A0A075B6K6 122 aa9.73□□□□□ -0.85
TSPAN9-203ENST00000431374 SERF1AO75920 110 aa9.73□□□□□ -0.85
TSPAN9-203ENST00000431374 A0A087WYN8 130 aa9.72□□□□□ -0.85
TSPAN9-203ENST00000431374 K7EMI3 77 aa9.72□□□□□ -0.85
TSPAN9-203ENST00000431374 SCGB1D1O95968 90 aa9.72□□□□□ -0.85
TSPAN9-203ENST00000431374 SYCNQ0VAF6 134 aa9.72□□□□□ -0.85
TSPAN9-203ENST00000431374 KIAA1644Q3SXP7 199 aa9.72□□□□□ -0.85
TSPAN9-203ENST00000431374 ORMDL2Q53FV1 153 aa9.72□□□□□ -0.85
TSPAN9-203ENST00000431374 NXT2Q9NPJ8 142 aaKnown RBP9.72□□□□□ -0.85
TSPAN9-203ENST00000431374 CYSLTR1Q9Y271 337 aa9.72□□□□□ -0.85
TSPAN9-203ENST00000431374 IGLV4-69A0A075B6H9 119 aa9.71□□□□□ -0.86
TSPAN9-203ENST00000431374 IGHV3OR16-9A0A0B4J2B5 98 aa9.71□□□□□ -0.86
TSPAN9-203ENST00000431374 RPL37AP61513 92 aaKnown RBP9.71□□□□□ -0.86
TSPAN9-203ENST00000431374 C2orf66Q6UXQ4 117 aa9.71□□□□□ -0.86
TSPAN9-203ENST00000431374 TEX43Q6ZNM6 134 aa9.71□□□□□ -0.86
TSPAN9-203ENST00000431374 DPH3Q96FX2 82 aa9.71□□□□□ -0.86
TSPAN9-203ENST00000431374 C14orf144Q96I85 54 aa9.71□□□□□ -0.86
TSPAN9-203ENST00000431374 PLAC8Q9NZF1 115 aa9.71□□□□□ -0.86
TSPAN9-203ENST00000431374 IGKV2-24A0A0C4DH68 120 aa9.7□□□□□ -0.86
TSPAN9-203ENST00000431374 APOMO95445 188 aa9.7□□□□□ -0.86
TSPAN9-203ENST00000431374 LINC00310P59036 64 aa9.7□□□□□ -0.86
TSPAN9-203ENST00000431374 TMEM141Q96I45 108 aa9.7□□□□□ -0.86
TSPAN9-203ENST00000431374 C2orf88Q9BSF0 95 aa9.7□□□□□ -0.86
TSPAN9-203ENST00000431374 PKIGQ9Y2B9 76 aa9.7□□□□□ -0.86
TSPAN9-203ENST00000431374 A0A096LNI7 61 aa9.69□□□□□ -0.86
TSPAN9-203ENST00000431374 SPAG11BQ08648 103 aa9.69□□□□□ -0.86
TSPAN9-203ENST00000431374 MAJINQ3KP22 176 aa9.69□□□□□ -0.86
TSPAN9-203ENST00000431374 Q6ZRU5 148 aa9.69□□□□□ -0.86
TSPAN9-203ENST00000431374 C2orf48Q96LS8 159 aa9.69□□□□□ -0.86
TSPAN9-203ENST00000431374 IGIPA6NJ69 53 aa9.68□□□□□ -0.86
TSPAN9-203ENST00000431374 CAMK2N2Q96S95 79 aa9.68□□□□□ -0.86
TSPAN9-203ENST00000431374 PRO1933Q9H354 126 aa9.68□□□□□ -0.86
TSPAN9-203ENST00000431374 NUPR1O60356 82 aa9.67□□□□□ -0.86
TSPAN9-203ENST00000431374 NPSP0C0P6 89 aa9.67□□□□□ -0.86
TSPAN9-203ENST00000431374 UBE2D1P51668 147 aa9.67□□□□□ -0.86
TSPAN9-203ENST00000431374 LINC00242Q5T6M2 205 aa9.67□□□□□ -0.86
TSPAN9-203ENST00000431374 Q6ZN92 141 aa9.67□□□□□ -0.86
TSPAN9-203ENST00000431374 C18orf32Q8TCD1 76 aa9.67□□□□□ -0.86
TSPAN9-203ENST00000431374 ORAOV1Q8WV07 137 aa9.67□□□□□ -0.86
TSPAN9-203ENST00000431374 CHCHD1Q96BP2 118 aaKnown RBP9.67□□□□□ -0.86
TSPAN9-203ENST00000431374 AMELXQ99217 191 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 123.6 ms