RNA–Protein interactions for RNA: ENST00000430407.1

RCC1-209, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 5

Gene RCC1, Length 1,121 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-209ENST00000430407 C5orf38Q86SI9 138 aa11.21□□□□□ -0.61
RCC1-209ENST00000430407 OPRPNQ99935 248 aaPredicted RBP11.21□□□□□ -0.61
RCC1-209ENST00000430407 IFITM10A6NMD0 228 aa11.2□□□□□ -0.62
RCC1-209ENST00000430407 K7EMI3 77 aa11.2□□□□□ -0.62
RCC1-209ENST00000430407 ORMDL2Q53FV1 153 aa11.19□□□□□ -0.62
RCC1-209ENST00000430407 NXT2Q9NPJ8 142 aaKnown RBP11.19□□□□□ -0.62
RCC1-209ENST00000430407 PLAC8Q9NZF1 115 aa11.19□□□□□ -0.62
RCC1-209ENST00000430407 CYSLTR1Q9Y271 337 aa11.19□□□□□ -0.62
RCC1-209ENST00000430407 IGLV4-69A0A075B6H9 119 aa11.18□□□□□ -0.62
RCC1-209ENST00000430407 IGLV4-3A0A075B6K6 122 aa11.18□□□□□ -0.62
RCC1-209ENST00000430407 IGKV2-24A0A0C4DH68 120 aa11.18□□□□□ -0.62
RCC1-209ENST00000430407 HNRNPA3P51991 378 aaKnown RBP11.18□□□□□ -0.62
RCC1-209ENST00000430407 MAJINQ3KP22 176 aa11.18□□□□□ -0.62
RCC1-209ENST00000430407 C10orf91Q5T1B1 145 aa11.18□□□□□ -0.62
RCC1-209ENST00000430407 LINC00474Q9P2X8 69 aa11.18□□□□□ -0.62
RCC1-209ENST00000430407 IGHV3OR16-9A0A0B4J2B5 98 aa11.17□□□□□ -0.62
RCC1-209ENST00000430407 TMEM141Q96I45 108 aa11.17□□□□□ -0.62
RCC1-209ENST00000430407 C2orf48Q96LS8 159 aa11.17□□□□□ -0.62
RCC1-209ENST00000430407 G0S2P27469 103 aa11.16□□□□□ -0.62
RCC1-209ENST00000430407 COX19Q49B96 90 aa11.16□□□□□ -0.62
RCC1-209ENST00000430407 C2orf66Q6UXQ4 117 aa11.16□□□□□ -0.62
RCC1-209ENST00000430407 Q6ZRU5 148 aa11.16□□□□□ -0.62
RCC1-209ENST00000430407 OR10D4PQ8NGN7 298 aa11.16□□□□□ -0.62
RCC1-209ENST00000430407 CAMK2N2Q96S95 79 aa11.16□□□□□ -0.62
RCC1-209ENST00000430407 GNB1LQ9BYB4 327 aa11.16□□□□□ -0.62
RCC1-209ENST00000430407 CARHSP1Q9Y2V2 147 aaKnown RBP11.16□□□□□ -0.62
RCC1-209ENST00000430407 A0A096LNI7 61 aa11.15□□□□□ -0.62
RCC1-209ENST00000430407 SPAG11BQ08648 103 aa11.15□□□□□ -0.62
RCC1-209ENST00000430407 RHEBQ15382 184 aa11.15□□□□□ -0.62
RCC1-209ENST00000430407 KIAA1644Q3SXP7 199 aa11.15□□□□□ -0.62
RCC1-209ENST00000430407 Q6ZN92 141 aa11.15□□□□□ -0.62
RCC1-209ENST00000430407 TEX43Q6ZNM6 134 aa11.15□□□□□ -0.62
RCC1-209ENST00000430407 TGIF2-C20orf24A0A0A6YYL0 155 aa11.14□□□□□ -0.63
RCC1-209ENST00000430407 NPSP0C0P6 89 aa11.14□□□□□ -0.63
RCC1-209ENST00000430407 STPG4Q8N801 248 aa11.14□□□□□ -0.63
RCC1-209ENST00000430407 C2orf88Q9BSF0 95 aa11.14□□□□□ -0.63
RCC1-209ENST00000430407 RPS10P5Q9NQ39 176 aa11.14□□□□□ -0.63
RCC1-209ENST00000430407 LOC107984640A0A0U1RRK4 108 aa11.13□□□□□ -0.63
RCC1-209ENST00000430407 F8WDY8 70 aa11.13□□□□□ -0.63
RCC1-209ENST00000430407 C7orf33Q8WU49 177 aa11.13□□□□□ -0.63
RCC1-209ENST00000430407 ORAOV1Q8WV07 137 aa11.13□□□□□ -0.63
RCC1-209ENST00000430407 LINC00242Q5T6M2 205 aa11.12□□□□□ -0.63
RCC1-209ENST00000430407 VCX2Q9H322 139 aa11.12□□□□□ -0.63
RCC1-209ENST00000430407 IGIPA6NJ69 53 aa11.11□□□□□ -0.63
RCC1-209ENST00000430407 MT-ND6P03923 174 aa11.11□□□□□ -0.63
RCC1-209ENST00000430407 UBE2D1P51668 147 aa11.11□□□□□ -0.63
RCC1-209ENST00000430407 AMELXQ99217 191 aa11.11□□□□□ -0.63
RCC1-209ENST00000430407 A0A087WZ39 114 aa11.1□□□□□ -0.63
RCC1-209ENST00000430407 PTTG1IPP53801 180 aa11.1□□□□□ -0.63
RCC1-209ENST00000430407 GAGE2BQ13066 116 aa11.1□□□□□ -0.63
RCC1-209ENST00000430407 RNF151Q2KHN1 245 aa11.1□□□□□ -0.63
RCC1-209ENST00000430407 PAPPA-AS1Q5QFB9 102 aa11.1□□□□□ -0.63
RCC1-209ENST00000430407 LRP1Q07954 4544 aaKnown RBP11.1□□□□□ -0.63
RCC1-209ENST00000430407 ALKBH7Q9BT30 221 aaPredicted RBP11.09□□□□□ -0.63
RCC1-209ENST00000430407 MRPL35Q9NZE8 188 aaKnown RBP11.09□□□□□ -0.63
RCC1-209ENST00000430407 NDUFA1O15239 70 aa11.08□□□□□ -0.64
RCC1-209ENST00000430407 LINC00173Q6ZV60 143 aa11.08□□□□□ -0.64
RCC1-209ENST00000430407 LINC01561Q8N1V8 128 aa11.08□□□□□ -0.64
RCC1-209ENST00000430407 TOMM6Q96B49 74 aa11.08□□□□□ -0.64
RCC1-209ENST00000430407 TIMM17AQ99595 171 aa11.08□□□□□ -0.64
RCC1-209ENST00000430407 MRPL18Q9H0U6 180 aaKnown RBP11.08□□□□□ -0.64
RCC1-209ENST00000430407 LINC01549A6NIU2 74 aa11.07□□□□□ -0.64
RCC1-209ENST00000430407 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.07□□□□□ -0.64
RCC1-209ENST00000430407 FABP9Q0Z7S8 132 aa11.07□□□□□ -0.64
RCC1-209ENST00000430407 NDUFA5Q16718 116 aa11.07□□□□□ -0.64
RCC1-209ENST00000430407 ZC2HC1BQ5TFG8 222 aa11.07□□□□□ -0.64
RCC1-209ENST00000430407 HMCN2Q8NDA2 5059 aa11.06□□□□□ -0.64
RCC1-209ENST00000430407 MT1HL1P0DM35 61 aa11.06□□□□□ -0.64
RCC1-209ENST00000430407 FAM19A3Q7Z5A8 133 aa11.06□□□□□ -0.64
RCC1-209ENST00000430407 LINC01546A6NGU7 62 aa11.05□□□□□ -0.64
RCC1-209ENST00000430407 SNAPINO95295 136 aa11.05□□□□□ -0.64
RCC1-209ENST00000430407 APOC3P02656 99 aa11.05□□□□□ -0.64
RCC1-209ENST00000430407 SEC11AP67812 179 aa11.05□□□□□ -0.64
RCC1-209ENST00000430407 RPL18AQ02543 176 aaKnown RBP11.05□□□□□ -0.64
RCC1-209ENST00000430407 ERASQ7Z444 233 aa11.05□□□□□ -0.64
RCC1-209ENST00000430407 SVBPQ8N300 66 aa11.05□□□□□ -0.64
RCC1-209ENST00000430407 A0A0J9YXV3 536 aa11.04□□□□□ -0.64
RCC1-209ENST00000430407 KIAA0087Q14695 138 aa11.04□□□□□ -0.64
RCC1-209ENST00000430407 SCGB3A1Q96QR1 104 aa11.04□□□□□ -0.64
RCC1-209ENST00000430407 HERVK_113P63121 156 aa11.03□□□□□ -0.64
RCC1-209ENST00000430407 C10orf25Q5T742 122 aa11.03□□□□□ -0.64
RCC1-209ENST00000430407 UNQ6190/PRO20217Q6UXQ8 127 aa11.03□□□□□ -0.64
RCC1-209ENST00000430407 FA2HQ7L5A8 372 aa11.03□□□□□ -0.64
RCC1-209ENST00000430407 SMCO4Q9NRQ5 59 aa11.03□□□□□ -0.64
RCC1-209ENST00000430407 TLX1NBP0CAT3 122 aa11.02□□□□□ -0.65
RCC1-209ENST00000430407 PKHD1L1Q86WI1 4243 aa11.01□□□□□ -0.65
RCC1-209ENST00000430407 A0A1W2PNN7 141 aa11.01□□□□□ -0.65
RCC1-209ENST00000430407 GEMIN7Q9H840 131 aaKnown RBP11.01□□□□□ -0.65
RCC1-209ENST00000430407 C6orf48Q9UBA6 75 aa11.01□□□□□ -0.65
RCC1-209ENST00000430407 TRAPPC1Q9Y5R8 145 aa11.01□□□□□ -0.65
RCC1-209ENST00000430407 FAT3Q8TDW7 4589 aa11.01□□□□□ -0.65
RCC1-209ENST00000430407 UBR4Q5T4S7 5183 aa11□□□□□ -0.65
RCC1-209ENST00000430407 TRBV30A0A0K0K1B3 111 aa11□□□□□ -0.65
RCC1-209ENST00000430407 PRSS2P07478 247 aa11□□□□□ -0.65
RCC1-209ENST00000430407 PRR3P79522 188 aaKnown RBP11□□□□□ -0.65
RCC1-209ENST00000430407 C9orf116Q5BN46 136 aaPredicted RBP11□□□□□ -0.65
RCC1-209ENST00000430407 PACRGQ96M98 296 aaPredicted RBP11□□□□□ -0.65
RCC1-209ENST00000430407 Q6ZRP5 223 aa10.98□□□□□ -0.65
RCC1-209ENST00000430407 TOMM7Q9P0U1 55 aa10.98□□□□□ -0.65
RCC1-209ENST00000430407 CDKN2A-AS1Q9UH64 79 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms