RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 LRP1Q07954 4544 aaKnown RBP9.45□□□□□ -0.9
RTN4-210ENST00000427710 A0A087WYN8 130 aa9.45□□□□□ -0.9
RTN4-210ENST00000427710 KRTAP10-4P60372 401 aaPredicted RBP9.45□□□□□ -0.9
RTN4-210ENST00000427710 CIRBPQ14011 172 aaKnown RBP9.45□□□□□ -0.9
RTN4-210ENST00000427710 C2orf66Q6UXQ4 117 aa9.45□□□□□ -0.9
RTN4-210ENST00000427710 SPACA4Q8TDM5 124 aa9.45□□□□□ -0.9
RTN4-210ENST00000427710 A0A096LNI7 61 aa9.44□□□□□ -0.9
RTN4-210ENST00000427710 SYCNQ0VAF6 134 aa9.44□□□□□ -0.9
RTN4-210ENST00000427710 RHEBQ15382 184 aa9.44□□□□□ -0.9
RTN4-210ENST00000427710 MAJINQ3KP22 176 aa9.44□□□□□ -0.9
RTN4-210ENST00000427710 Q6ZRU5 148 aa9.44□□□□□ -0.9
RTN4-210ENST00000427710 TMEM141Q96I45 108 aa9.44□□□□□ -0.9
RTN4-210ENST00000427710 CYSLTR1Q9Y271 337 aa9.44□□□□□ -0.9
RTN4-210ENST00000427710 PYGO1Q9Y3Y4 419 aa9.44□□□□□ -0.9
RTN4-210ENST00000427710 DMBT1Q9UGM3 2413 aaPredicted RBP9.44□□□□□ -0.9
RTN4-210ENST00000427710 APOC3P02656 99 aa9.43□□□□□ -0.9
RTN4-210ENST00000427710 RPL37AP61513 92 aaKnown RBP9.43□□□□□ -0.9
RTN4-210ENST00000427710 ORMDL2Q53FV1 153 aa9.43□□□□□ -0.9
RTN4-210ENST00000427710 GNB1LQ9BYB4 327 aa9.43□□□□□ -0.9
RTN4-210ENST00000427710 NXT2Q9NPJ8 142 aaKnown RBP9.43□□□□□ -0.9
RTN4-210ENST00000427710 HERC1Q15751 4861 aa9.43□□□□□ -0.9
RTN4-210ENST00000427710 TGIF2-C20orf24A0A0A6YYL0 155 aa9.42□□□□□ -0.9
RTN4-210ENST00000427710 IGHV3OR16-9A0A0B4J2B5 98 aa9.42□□□□□ -0.9
RTN4-210ENST00000427710 SPAG11BQ08648 103 aa9.42□□□□□ -0.9
RTN4-210ENST00000427710 FABP9Q0Z7S8 132 aa9.42□□□□□ -0.9
RTN4-210ENST00000427710 ORAOV1Q8WV07 137 aa9.42□□□□□ -0.9
RTN4-210ENST00000427710 MRPL18Q9H0U6 180 aaKnown RBP9.42□□□□□ -0.9
RTN4-210ENST00000427710 A0A0J9YXV3 536 aa9.41□□□□□ -0.9
RTN4-210ENST00000427710 APOMO95445 188 aa9.41□□□□□ -0.9
RTN4-210ENST00000427710 LINC00173Q6ZV60 143 aa9.41□□□□□ -0.9
RTN4-210ENST00000427710 CAMK2N2Q96S95 79 aa9.41□□□□□ -0.9
RTN4-210ENST00000427710 ALKBH7Q9BT30 221 aaPredicted RBP9.41□□□□□ -0.9
RTN4-210ENST00000427710 IGIPA6NJ69 53 aa9.4□□□□□ -0.9
RTN4-210ENST00000427710 HNRNPA3P51991 378 aaKnown RBP9.4□□□□□ -0.9
RTN4-210ENST00000427710 LINC00242Q5T6M2 205 aa9.4□□□□□ -0.9
RTN4-210ENST00000427710 TEX43Q6ZNM6 134 aa9.4□□□□□ -0.9
RTN4-210ENST00000427710 STPG4Q8N801 248 aa9.4□□□□□ -0.9
RTN4-210ENST00000427710 PLAC8Q9NZF1 115 aa9.4□□□□□ -0.9
RTN4-210ENST00000427710 UBE2D1P51668 147 aa9.39□□□□□ -0.91
RTN4-210ENST00000427710 GAGE2BQ13066 116 aa9.39□□□□□ -0.91
RTN4-210ENST00000427710 AMELXQ99217 191 aa9.39□□□□□ -0.91
RTN4-210ENST00000427710 K7EMI3 77 aa9.38□□□□□ -0.91
RTN4-210ENST00000427710 COX19Q49B96 90 aa9.38□□□□□ -0.91
RTN4-210ENST00000427710 Q6ZN92 141 aa9.38□□□□□ -0.91
RTN4-210ENST00000427710 TOMM6Q96B49 74 aa9.38□□□□□ -0.91
RTN4-210ENST00000427710 C2orf48Q96LS8 159 aa9.38□□□□□ -0.91
RTN4-210ENST00000427710 C2orf88Q9BSF0 95 aa9.38□□□□□ -0.91
RTN4-210ENST00000427710 VCX2Q9H322 139 aa9.38□□□□□ -0.91
RTN4-210ENST00000427710 C10orf25Q5T742 122 aa9.37□□□□□ -0.91
RTN4-210ENST00000427710 OR10D4PQ8NGN7 298 aa9.37□□□□□ -0.91
RTN4-210ENST00000427710 A0A087WZ39 114 aa9.36□□□□□ -0.91
RTN4-210ENST00000427710 LOC107984640A0A0U1RRK4 108 aa9.36□□□□□ -0.91
RTN4-210ENST00000427710 SNAPINO95295 136 aa9.36□□□□□ -0.91
RTN4-210ENST00000427710 MT-ND6P03923 174 aa9.36□□□□□ -0.91
RTN4-210ENST00000427710 NDUFA5Q16718 116 aa9.36□□□□□ -0.91
RTN4-210ENST00000427710 SVBPQ8N300 66 aa9.36□□□□□ -0.91
RTN4-210ENST00000427710 TRAPPC1Q9Y5R8 145 aa9.36□□□□□ -0.91
RTN4-210ENST00000427710 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.35□□□□□ -0.91
RTN4-210ENST00000427710 PTTG1IPP53801 180 aa9.35□□□□□ -0.91
RTN4-210ENST00000427710 RPL18AQ02543 176 aaKnown RBP9.35□□□□□ -0.91
RTN4-210ENST00000427710 UNQ6190/PRO20217Q6UXQ8 127 aa9.35□□□□□ -0.91
RTN4-210ENST00000427710 FA2HQ7L5A8 372 aa9.35□□□□□ -0.91
RTN4-210ENST00000427710 SCGB3A1Q96QR1 104 aa9.35□□□□□ -0.91
RTN4-210ENST00000427710 LINC01546A6NGU7 62 aa9.34□□□□□ -0.91
RTN4-210ENST00000427710 TIMM17AQ99595 171 aa9.34□□□□□ -0.91
RTN4-210ENST00000427710 A0A1W2PNN7 141 aa9.33□□□□□ -0.92
RTN4-210ENST00000427710 NDUFA1O15239 70 aa9.33□□□□□ -0.92
RTN4-210ENST00000427710 KIAA0087Q14695 138 aa9.33□□□□□ -0.92
RTN4-210ENST00000427710 SMCO4Q9NRQ5 59 aa9.33□□□□□ -0.92
RTN4-210ENST00000427710 J3QL48 77 aa9.32□□□□□ -0.92
RTN4-210ENST00000427710 NPSP0C0P6 89 aa9.32□□□□□ -0.92
RTN4-210ENST00000427710 G0S2P27469 103 aa9.32□□□□□ -0.92
RTN4-210ENST00000427710 C2orf82Q6UX34 121 aa9.32□□□□□ -0.92
RTN4-210ENST00000427710 ERASQ7Z444 233 aa9.32□□□□□ -0.92
RTN4-210ENST00000427710 SLC7A5P1Q8MH63 180 aa9.32□□□□□ -0.92
RTN4-210ENST00000427710 URB1-AS1Q96HZ7 61 aa9.32□□□□□ -0.92
RTN4-210ENST00000427710 MRPL35Q9NZE8 188 aaKnown RBP9.32□□□□□ -0.92
RTN4-210ENST00000427710 C6orf48Q9UBA6 75 aa9.32□□□□□ -0.92
RTN4-210ENST00000427710 PKIGQ9Y2B9 76 aa9.32□□□□□ -0.92
RTN4-210ENST00000427710 C18orf32Q8TCD1 76 aa9.31□□□□□ -0.92
RTN4-210ENST00000427710 C7orf33Q8WU49 177 aa9.31□□□□□ -0.92
RTN4-210ENST00000427710 TOMM7Q9P0U1 55 aa9.31□□□□□ -0.92
RTN4-210ENST00000427710 LINC00474Q9P2X8 69 aa9.31□□□□□ -0.92
RTN4-210ENST00000427710 RNF151Q2KHN1 245 aa9.3□□□□□ -0.92
RTN4-210ENST00000427710 PAPPA-AS1Q5QFB9 102 aa9.3□□□□□ -0.92
RTN4-210ENST00000427710 FAM19A3Q7Z5A8 133 aa9.3□□□□□ -0.92
RTN4-210ENST00000427710 YPEL4Q96NS1 127 aa9.3□□□□□ -0.92
RTN4-210ENST00000427710 CDKN2A-AS1Q9UH64 79 aa9.3□□□□□ -0.92
RTN4-210ENST00000427710 KRTAP29-1A8MX34 341 aaPredicted RBP9.29□□□□□ -0.92
RTN4-210ENST00000427710 PMCHL1Q16048 86 aa9.29□□□□□ -0.92
RTN4-210ENST00000427710 C9orf116Q5BN46 136 aaPredicted RBP9.29□□□□□ -0.92
RTN4-210ENST00000427710 CBLN2Q8IUK8 224 aa9.29□□□□□ -0.92
RTN4-210ENST00000427710 LINC01561Q8N1V8 128 aa9.29□□□□□ -0.92
RTN4-210ENST00000427710 GEMIN7Q9H840 131 aaKnown RBP9.29□□□□□ -0.92
RTN4-210ENST00000427710 A0A096LNJ9 63 aa9.28□□□□□ -0.92
RTN4-210ENST00000427710 F8WDY8 70 aa9.28□□□□□ -0.92
RTN4-210ENST00000427710 HERVK_113P63121 156 aa9.28□□□□□ -0.92
RTN4-210ENST00000427710 GAGE2EQ4V326 116 aa9.28□□□□□ -0.92
RTN4-210ENST00000427710 Q6ZRP5 223 aa9.28□□□□□ -0.92
RTN4-210ENST00000427710 GAGE2DQ9UEU5 116 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms