RNA–Protein interactions for RNA: ENST00000427157.1

LINC02541-201, Transcript of long intergenic non-protein coding RNA 2541, humanhuman

TSL 3 BASIC

Gene LINC02541, Length 327 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02541-201ENST00000427157 CCL22O00626 93 aa-1.32□□□□□ -2.62
LINC02541-201ENST00000427157 ARPC5O15511 151 aa-1.32□□□□□ -2.62
LINC02541-201ENST00000427157 RPL22P35268 128 aaKnown RBP-1.32□□□□□ -2.62
LINC02541-201ENST00000427157 HSD17B12Q53GQ0 312 aa-1.32□□□□□ -2.62
LINC02541-201ENST00000427157 NDUFA11Q86Y39 141 aa-1.32□□□□□ -2.62
LINC02541-201ENST00000427157 SLC35B3Q9H1N7 401 aa-1.32□□□□□ -2.62
LINC02541-201ENST00000427157 CCDC141Q6ZP82 1450 aa-1.32□□□□□ -2.62
LINC02541-201ENST00000427157 IBTKQ9P2D0 1353 aaPredicted RBP-1.33□□□□□ -2.62
LINC02541-201ENST00000427157 TRAV2A0A0B4J234 112 aa-1.33□□□□□ -2.62
LINC02541-201ENST00000427157 MMP24-AS1A0A0U1RRL7 71 aa-1.33□□□□□ -2.62
LINC02541-201ENST00000427157 FAM223BA6NKX1 122 aa-1.33□□□□□ -2.62
LINC02541-201ENST00000427157 TMEM238C9JI98 176 aa-1.33□□□□□ -2.62
LINC02541-201ENST00000427157 I3L3M4 83 aa-1.33□□□□□ -2.62
LINC02541-201ENST00000427157 TCRAP04437 139 aa-1.33□□□□□ -2.62
LINC02541-201ENST00000427157 SMIM6P0DI80 62 aa-1.33□□□□□ -2.62
LINC02541-201ENST00000427157 MRPS15P82914 257 aaKnown RBP-1.33□□□□□ -2.62
LINC02541-201ENST00000427157 C9orf116Q5BN46 136 aaPredicted RBP-1.33□□□□□ -2.62
LINC02541-201ENST00000427157 STX12Q86Y82 276 aa-1.33□□□□□ -2.62
LINC02541-201ENST00000427157 DYNLRB2Q8TF09 96 aa-1.33□□□□□ -2.62
LINC02541-201ENST00000427157 CCDC32Q9BV29 185 aa-1.33□□□□□ -2.62
LINC02541-201ENST00000427157 CRIPTQ9P021 101 aa-1.33□□□□□ -2.62
LINC02541-201ENST00000427157 MYH8P13535 1937 aa-1.33□□□□□ -2.62
LINC02541-201ENST00000427157 RGPD2P0DJD1 1756 aa-1.34□□□□□ -2.62
LINC02541-201ENST00000427157 PRDM15P57071 1507 aaPredicted RBP-1.34□□□□□ -2.62
LINC02541-201ENST00000427157 PRDM2Q13029 1718 aa-1.34□□□□□ -2.62
LINC02541-201ENST00000427157 M0R135 149 aa-1.34□□□□□ -2.62
LINC02541-201ENST00000427157 HIST1H1BP16401 226 aaKnown RBP-1.34□□□□□ -2.62
LINC02541-201ENST00000427157 SERPINB1P30740 379 aa-1.34□□□□□ -2.62
LINC02541-201ENST00000427157 COX17Q14061 63 aa-1.34□□□□□ -2.62
LINC02541-201ENST00000427157 SPCS2Q15005 226 aa-1.34□□□□□ -2.62
LINC02541-201ENST00000427157 ZNF818PQ6ZRF7 136 aa-1.34□□□□□ -2.62
LINC02541-201ENST00000427157 TMED4Q7Z7H5 227 aa-1.34□□□□□ -2.62
LINC02541-201ENST00000427157 VSTM2AQ8TAG5 236 aa-1.34□□□□□ -2.62
LINC02541-201ENST00000427157 PP6455Q8WZ26 134 aa-1.34□□□□□ -2.62
LINC02541-201ENST00000427157 ERG28Q9UKR5 140 aa-1.34□□□□□ -2.62
LINC02541-201ENST00000427157 DOCK2Q92608 1830 aa-1.34□□□□□ -2.62
LINC02541-201ENST00000427157 LRRC37A3O60309 1634 aa-1.34□□□□□ -2.62
LINC02541-201ENST00000427157 KDM5CP41229 1560 aa-1.34□□□□□ -2.62
LINC02541-201ENST00000427157 CEP170BQ9Y4F5 1589 aaPredicted RBP-1.34□□□□□ -2.62
LINC02541-201ENST00000427157 A0A0G2JMZ2 1700 aa-1.35□□□□□ -2.62
LINC02541-201ENST00000427157 C4AP0C0L4 1744 aa-1.35□□□□□ -2.62
LINC02541-201ENST00000427157 C4BP0C0L5 1744 aa-1.35□□□□□ -2.62
LINC02541-201ENST00000427157 KIAA1551Q9HCM1 1747 aa-1.35□□□□□ -2.62
LINC02541-201ENST00000427157 UNC80Q8N2C7 3258 aa-1.35□□□□□ -2.63
LINC02541-201ENST00000427157 MBD5Q9P267 1494 aa-1.35□□□□□ -2.63
LINC02541-201ENST00000427157 SHANK2Q9UPX8 1470 aa-1.35□□□□□ -2.63
LINC02541-201ENST00000427157 TRAV12-3A0A0B4J271 114 aa-1.35□□□□□ -2.63
LINC02541-201ENST00000427157 CLPSL1A2RUU4 121 aa-1.35□□□□□ -2.63
LINC02541-201ENST00000427157 LINC01546A6NGU7 62 aa-1.35□□□□□ -2.63
LINC02541-201ENST00000427157 HCG22E2RYF7 251 aa-1.35□□□□□ -2.63
LINC02541-201ENST00000427157 PIRTP0C851 137 aa-1.35□□□□□ -2.63
LINC02541-201ENST00000427157 POLR2HP52434 150 aaKnown RBP-1.35□□□□□ -2.63
LINC02541-201ENST00000427157 CCL18P55774 89 aa-1.35□□□□□ -2.63
LINC02541-201ENST00000427157 TMEM170BQ5T4T1 132 aa-1.35□□□□□ -2.63
LINC02541-201ENST00000427157 Q6ZUT4 128 aa-1.35□□□□□ -2.63
LINC02541-201ENST00000427157 MRPL40Q9NQ50 206 aaKnown RBP-1.35□□□□□ -2.63
LINC02541-201ENST00000427157 UBE2D4Q9Y2X8 147 aa-1.35□□□□□ -2.63
LINC02541-201ENST00000427157 ANKRD36A6QL64 1941 aa-1.35□□□□□ -2.63
LINC02541-201ENST00000427157 KIF21AQ7Z4S6 1674 aa-1.35□□□□□ -2.63
LINC02541-201ENST00000427157 PBRM1Q86U86 1689 aa-1.35□□□□□ -2.63
LINC02541-201ENST00000427157 USP34Q70CQ2 3546 aa-1.36□□□□□ -2.63
LINC02541-201ENST00000427157 RAPGEF6Q8TEU7 1601 aa-1.36□□□□□ -2.63
LINC02541-201ENST00000427157 SCN11AQ9UI33 1791 aa-1.36□□□□□ -2.63
LINC02541-201ENST00000427157 MGPP08493 103 aa-1.36□□□□□ -2.63
LINC02541-201ENST00000427157 RPL7P18124 248 aaKnown RBP-1.36□□□□□ -2.63
LINC02541-201ENST00000427157 PSPHP78330 225 aa-1.36□□□□□ -2.63
LINC02541-201ENST00000427157 TMEM78Q5T7P6 136 aa-1.36□□□□□ -2.63
LINC02541-201ENST00000427157 Q6AWC8 147 aa-1.36□□□□□ -2.63
LINC02541-201ENST00000427157 SCIMPQ6UWF3 145 aa-1.36□□□□□ -2.63
LINC02541-201ENST00000427157 THEM6Q8WUY1 208 aa-1.36□□□□□ -2.63
LINC02541-201ENST00000427157 HOPXQ9BPY8 73 aaPredicted RBP-1.36□□□□□ -2.63
LINC02541-201ENST00000427157 NOP16Q9Y3C1 178 aaKnown RBP-1.36□□□□□ -2.63
LINC02541-201ENST00000427157 CUX1P39880 1505 aa-1.36□□□□□ -2.63
LINC02541-201ENST00000427157 MED23Q9ULK4 1368 aa-1.36□□□□□ -2.63
LINC02541-201ENST00000427157 PXDNQ92626 1479 aa-1.37□□□□□ -2.63
LINC02541-201ENST00000427157 SYNMO15061 1565 aa-1.37□□□□□ -2.63
LINC02541-201ENST00000427157 SMARCA2P51531 1590 aa-1.37□□□□□ -2.63
LINC02541-201ENST00000427157 DISP2A7MBM2 1401 aa-1.37□□□□□ -2.63
LINC02541-201ENST00000427157 CLIP1P30622 1438 aa-1.37□□□□□ -2.63
LINC02541-201ENST00000427157 TRBV7-3A0A075B6L6 115 aa-1.37□□□□□ -2.63
LINC02541-201ENST00000427157 CTXND1A0A1B0GTU2 59 aa-1.37□□□□□ -2.63
LINC02541-201ENST00000427157 A0A1W2PRE2 83 aa-1.37□□□□□ -2.63
LINC02541-201ENST00000427157 FAM107AO95990 144 aa-1.37□□□□□ -2.63
LINC02541-201ENST00000427157 DEFB136Q30KP8 78 aa-1.37□□□□□ -2.63
LINC02541-201ENST00000427157 TTC9CQ8N5M4 171 aa-1.37□□□□□ -2.63
LINC02541-201ENST00000427157 STOML2Q9UJZ1 356 aa-1.37□□□□□ -2.63
LINC02541-201ENST00000427157 EIF3AQ14152 1382 aaKnown RBP-1.37□□□□□ -2.63
LINC02541-201ENST00000427157 BTAF1O14981 1849 aa-1.38□□□□□ -2.63
LINC02541-201ENST00000427157 MUC22E2RYF6 1773 aaPredicted RBP-1.38□□□□□ -2.63
LINC02541-201ENST00000427157 B2MP61769 119 aa-1.38□□□□□ -2.63
LINC02541-201ENST00000427157 FAM223AQ8IWN6 122 aa-1.38□□□□□ -2.63
LINC02541-201ENST00000427157 DEFB106AQ8N104 65 aa-1.38□□□□□ -2.63
LINC02541-201ENST00000427157 TMEM263Q8WUH6 116 aaKnown RBP-1.38□□□□□ -2.63
LINC02541-201ENST00000427157 PRO3102Q9H379 93 aa-1.38□□□□□ -2.63
LINC02541-201ENST00000427157 R4GMQ9 66 aa-1.38□□□□□ -2.63
LINC02541-201ENST00000427157 SHROOM2Q13796 1616 aa-1.38□□□□□ -2.63
LINC02541-201ENST00000427157 LRRC37AA6NMS7 1700 aa-1.38□□□□□ -2.63
LINC02541-201ENST00000427157 XRN1Q8IZH2 1706 aaKnown RBP-1.38□□□□□ -2.63
LINC02541-201ENST00000427157 PLXNC1O60486 1568 aa-1.38□□□□□ -2.63
LINC02541-201ENST00000427157 MYH13Q9UKX3 1938 aa-1.38□□□□□ -2.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms