RNA–Protein interactions for RNA: ENST00000426546.6

CCDC107-206, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCDC107, Length 1,242 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-206ENST00000426546 CCL25O15444 150 aa12.67□□□□□ -0.38
CCDC107-206ENST00000426546 Q8N8P6 123 aa12.67□□□□□ -0.38
CCDC107-206ENST00000426546 PRSS3P2Q8NHM4 247 aa12.67□□□□□ -0.38
CCDC107-206ENST00000426546 CDC42SE2Q9NRR3 84 aa12.67□□□□□ -0.38
CCDC107-206ENST00000426546 Q6ZRU5 148 aa12.66□□□□□ -0.38
CCDC107-206ENST00000426546 IGHV1-58A0A0C4DH39 117 aa12.65□□□□□ -0.38
CCDC107-206ENST00000426546 TCAPO15273 167 aa12.65□□□□□ -0.38
CCDC107-206ENST00000426546 IFI27P40305 119 aaPredicted RBP12.65□□□□□ -0.38
CCDC107-206ENST00000426546 SS18Q15532 418 aa12.65□□□□□ -0.38
CCDC107-206ENST00000426546 ZNF664Q8N3J9 261 aa12.65□□□□□ -0.38
CCDC107-206ENST00000426546 C7orf33Q8WU49 177 aa12.65□□□□□ -0.38
CCDC107-206ENST00000426546 NXT2Q9NPJ8 142 aaKnown RBP12.65□□□□□ -0.38
CCDC107-206ENST00000426546 PKIGQ9Y2B9 76 aa12.65□□□□□ -0.38
CCDC107-206ENST00000426546 MAJINQ3KP22 176 aa12.64□□□□□ -0.39
CCDC107-206ENST00000426546 IGKV2-24A0A0C4DH68 120 aa12.63□□□□□ -0.39
CCDC107-206ENST00000426546 CD164L2Q6UWJ8 174 aa12.63□□□□□ -0.39
CCDC107-206ENST00000426546 C18orf32Q8TCD1 76 aa12.63□□□□□ -0.39
CCDC107-206ENST00000426546 SMAGPQ0VAQ4 97 aa12.62□□□□□ -0.39
CCDC107-206ENST00000426546 LINC00474Q9P2X8 69 aa12.62□□□□□ -0.39
CCDC107-206ENST00000426546 CSDC2Q9Y534 153 aaKnown RBP12.62□□□□□ -0.39
CCDC107-206ENST00000426546 A0A096LNI7 61 aa12.61□□□□□ -0.39
CCDC107-206ENST00000426546 MT1HL1P0DM35 61 aa12.61□□□□□ -0.39
CCDC107-206ENST00000426546 FA2HQ7L5A8 372 aa12.61□□□□□ -0.39
CCDC107-206ENST00000426546 STPG4Q8N801 248 aa12.61□□□□□ -0.39
CCDC107-206ENST00000426546 CARD19Q96LW7 228 aa12.6□□□□□ -0.39
CCDC107-206ENST00000426546 C1orf196B1AJZ1 125 aa12.59□□□□□ -0.39
CCDC107-206ENST00000426546 ZNF561-AS1K7EIQ3 104 aa12.59□□□□□ -0.39
CCDC107-206ENST00000426546 ORMDL2Q53FV1 153 aa12.59□□□□□ -0.39
CCDC107-206ENST00000426546 LINC00526Q96FQ7 95 aa12.59□□□□□ -0.39
CCDC107-206ENST00000426546 UBE2D4Q9Y2X8 147 aa12.59□□□□□ -0.39
CCDC107-206ENST00000426546 K7EMI3 77 aa12.58□□□□□ -0.4
CCDC107-206ENST00000426546 TMEM18Q96B42 140 aa12.58□□□□□ -0.4
CCDC107-206ENST00000426546 SYCNQ0VAF6 134 aa12.57□□□□□ -0.4
CCDC107-206ENST00000426546 LINC00614P0C842 121 aa12.56□□□□□ -0.4
CCDC107-206ENST00000426546 RAB5BP61020 215 aa12.56□□□□□ -0.4
CCDC107-206ENST00000426546 RPL39P62891 51 aaKnown RBP12.56□□□□□ -0.4
CCDC107-206ENST00000426546 BAGE3Q86Y29 109 aa12.56□□□□□ -0.4
CCDC107-206ENST00000426546 TIMM21Q9BVV7 248 aa12.56□□□□□ -0.4
CCDC107-206ENST00000426546 COX7A2LO14548 114 aa12.55□□□□□ -0.4
CCDC107-206ENST00000426546 MALP21145 153 aa12.55□□□□□ -0.4
CCDC107-206ENST00000426546 PRR3P79522 188 aaKnown RBP12.55□□□□□ -0.4
CCDC107-206ENST00000426546 URB1-AS1Q96HZ7 61 aa12.55□□□□□ -0.4
CCDC107-206ENST00000426546 LINC01546A6NGU7 62 aa12.54□□□□□ -0.4
CCDC107-206ENST00000426546 RNASE13Q5GAN3 156 aaKnown RBP12.53□□□□□ -0.4
CCDC107-206ENST00000426546 C2orf66Q6UXQ4 117 aa12.53□□□□□ -0.4
CCDC107-206ENST00000426546 Q6ZUT4 128 aa12.53□□□□□ -0.4
CCDC107-206ENST00000426546 CYSLTR1Q9Y271 337 aa12.53□□□□□ -0.4
CCDC107-206ENST00000426546 IGLV4-69A0A075B6H9 119 aa12.52□□□□□ -0.41
CCDC107-206ENST00000426546 TRAV13-1A0A0B4J241 112 aa12.52□□□□□ -0.41
CCDC107-206ENST00000426546 HIST1H2BKO60814 126 aa12.52□□□□□ -0.41
CCDC107-206ENST00000426546 HIST1H2BJP06899 126 aa12.52□□□□□ -0.41
CCDC107-206ENST00000426546 HIST1H2BOP23527 126 aa12.52□□□□□ -0.41
CCDC107-206ENST00000426546 G0S2P27469 103 aa12.52□□□□□ -0.41
CCDC107-206ENST00000426546 HIST1H2BBP33778 126 aa12.52□□□□□ -0.41
CCDC107-206ENST00000426546 HIST1H2BDP58876 126 aa12.52□□□□□ -0.41
CCDC107-206ENST00000426546 HIST1H2BCP62807 126 aa12.52□□□□□ -0.41
CCDC107-206ENST00000426546 HIST2H2BEQ16778 126 aa12.52□□□□□ -0.41
CCDC107-206ENST00000426546 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.52□□□□□ -0.41
CCDC107-206ENST00000426546 HIST1H2BHQ93079 126 aa12.52□□□□□ -0.41
CCDC107-206ENST00000426546 HIST1H2BNQ99877 126 aa12.52□□□□□ -0.41
CCDC107-206ENST00000426546 HIST1H2BMQ99879 126 aa12.52□□□□□ -0.41
CCDC107-206ENST00000426546 LOC107984640A0A0U1RRK4 108 aa12.5□□□□□ -0.41
CCDC107-206ENST00000426546 PTTG1IPP53801 180 aa12.5□□□□□ -0.41
CCDC107-206ENST00000426546 CHCHD1Q96BP2 118 aaKnown RBP12.5□□□□□ -0.41
CCDC107-206ENST00000426546 SPANXA1Q9NS26 97 aa12.5□□□□□ -0.41
CCDC107-206ENST00000426546 TOMM6Q96B49 74 aa12.49□□□□□ -0.41
CCDC107-206ENST00000426546 C2orf48Q96LS8 159 aa12.49□□□□□ -0.41
CCDC107-206ENST00000426546 CAMK2N2Q96S95 79 aa12.49□□□□□ -0.41
CCDC107-206ENST00000426546 SERF1AO75920 110 aa12.48□□□□□ -0.41
CCDC107-206ENST00000426546 APOMO95445 188 aa12.48□□□□□ -0.41
CCDC107-206ENST00000426546 PMCHL1Q16048 86 aa12.48□□□□□ -0.41
CCDC107-206ENST00000426546 LCE2DQ5TA82 110 aaPredicted RBP12.48□□□□□ -0.41
CCDC107-206ENST00000426546 HSBP1O75506 76 aa12.47□□□□□ -0.41
CCDC107-206ENST00000426546 C5orf38Q86SI9 138 aa12.47□□□□□ -0.41
CCDC107-206ENST00000426546 OPRPNQ99935 248 aaPredicted RBP12.47□□□□□ -0.41
CCDC107-206ENST00000426546 HBDP02042 147 aa12.46□□□□□ -0.41
CCDC107-206ENST00000426546 OR10D4PQ8NGN7 298 aa12.46□□□□□ -0.41
CCDC107-206ENST00000426546 FAM104AQ969W3 186 aa12.46□□□□□ -0.41
CCDC107-206ENST00000426546 LINC01600Q96MT4 127 aa12.46□□□□□ -0.41
CCDC107-206ENST00000426546 SCGB3A1Q96QR1 104 aa12.46□□□□□ -0.41
CCDC107-206ENST00000426546 PYGO1Q9Y3Y4 419 aa12.46□□□□□ -0.41
CCDC107-206ENST00000426546 LINC00310P59036 64 aa12.45□□□□□ -0.42
CCDC107-206ENST00000426546 MRPS36P82909 103 aaKnown RBP12.45□□□□□ -0.42
CCDC107-206ENST00000426546 GAGE2BQ13066 116 aa12.45□□□□□ -0.42
CCDC107-206ENST00000426546 Q6ZRP5 223 aa12.45□□□□□ -0.42
CCDC107-206ENST00000426546 LRP2P98164 4655 aa12.44□□□□□ -0.42
CCDC107-206ENST00000426546 A0A096LNJ9 63 aa12.44□□□□□ -0.42
CCDC107-206ENST00000426546 LINC01549A6NIU2 74 aa12.44□□□□□ -0.42
CCDC107-206ENST00000426546 IGIPA6NJ69 53 aa12.44□□□□□ -0.42
CCDC107-206ENST00000426546 NUPR1O60356 82 aa12.44□□□□□ -0.42
CCDC107-206ENST00000426546 NDUFA6P56556 154 aa12.44□□□□□ -0.42
CCDC107-206ENST00000426546 SPAG11BQ08648 103 aa12.44□□□□□ -0.42
CCDC107-206ENST00000426546 SPINK6Q6UWN8 80 aa12.44□□□□□ -0.42
CCDC107-206ENST00000426546 FAM19A2Q8N3H0 131 aa12.44□□□□□ -0.42
CCDC107-206ENST00000426546 TNXBP22105 4242 aa12.44□□□□□ -0.42
CCDC107-206ENST00000426546 IGLV4-3A0A075B6K6 122 aa12.43□□□□□ -0.42
CCDC107-206ENST00000426546 IGHV3OR16-9A0A0B4J2B5 98 aa12.43□□□□□ -0.42
CCDC107-206ENST00000426546 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.43□□□□□ -0.42
CCDC107-206ENST00000426546 RNF151Q2KHN1 245 aa12.43□□□□□ -0.42
CCDC107-206ENST00000426546 ERASQ7Z444 233 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms