RNA–Protein interactions for RNA: ENST00000424443.7

TSPAN3-203, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-203ENST00000424443 GVQW2A0A096LPI5 108 aaPredicted RBP16.55■□□□□ 0.24
TSPAN3-203ENST00000424443 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.55■□□□□ 0.24
TSPAN3-203ENST00000424443 IGHV3OR16-9A0A0B4J2B5 98 aa16.55■□□□□ 0.24
TSPAN3-203ENST00000424443 KRTAP10-1P60331 282 aa16.55■□□□□ 0.24
TSPAN3-203ENST00000424443 ZNF561-AS1K7EIQ3 104 aa16.54■□□□□ 0.24
TSPAN3-203ENST00000424443 SEC11AP67812 179 aa16.54■□□□□ 0.24
TSPAN3-203ENST00000424443 ATP5LO75964 103 aa16.52■□□□□ 0.24
TSPAN3-203ENST00000424443 CNBPP62633 177 aaKnown RBP16.52■□□□□ 0.24
TSPAN3-203ENST00000424443 PMVKQ15126 192 aa16.52■□□□□ 0.24
TSPAN3-203ENST00000424443 LINC01620Q4KN68 170 aa16.52■□□□□ 0.24
TSPAN3-203ENST00000424443 PDZD11Q5EBL8 140 aa16.51■□□□□ 0.23
TSPAN3-203ENST00000424443 GEMIN7Q9H840 131 aaKnown RBP16.51■□□□□ 0.23
TSPAN3-203ENST00000424443 BIRC6Q9NR09 4857 aa16.51■□□□□ 0.23
TSPAN3-203ENST00000424443 NDUFA6P56556 154 aa16.5■□□□□ 0.23
TSPAN3-203ENST00000424443 COX6A2Q02221 97 aa16.5■□□□□ 0.23
TSPAN3-203ENST00000424443 DNAH5Q8TE73 4624 aa16.5■□□□□ 0.23
TSPAN3-203ENST00000424443 SERF1AO75920 110 aa16.5■□□□□ 0.23
TSPAN3-203ENST00000424443 HERVK_113P63121 156 aa16.5■□□□□ 0.23
TSPAN3-203ENST00000424443 CST9LQ9H4G1 147 aa16.5■□□□□ 0.23
TSPAN3-203ENST00000424443 DYNC1H1Q14204 4646 aaKnown RBP16.49■□□□□ 0.23
TSPAN3-203ENST00000424443 FAM19A3Q7Z5A8 133 aa16.49■□□□□ 0.23
TSPAN3-203ENST00000424443 C9orf163Q8N9P6 203 aa16.49■□□□□ 0.23
TSPAN3-203ENST00000424443 A0A087WZ39 114 aa16.48■□□□□ 0.23
TSPAN3-203ENST00000424443 CDK2AP2O75956 126 aa16.47■□□□□ 0.23
TSPAN3-203ENST00000424443 FAM19A2Q8N3H0 131 aa16.47■□□□□ 0.23
TSPAN3-203ENST00000424443 OR10D4PQ8NGN7 298 aa16.47■□□□□ 0.23
TSPAN3-203ENST00000424443 ORAOV1Q8WV07 137 aa16.47■□□□□ 0.23
TSPAN3-203ENST00000424443 LINC00526Q96FQ7 95 aa16.47■□□□□ 0.23
TSPAN3-203ENST00000424443 A0A0J9YXV3 536 aa16.46■□□□□ 0.23
TSPAN3-203ENST00000424443 SLPIP03973 132 aa16.46■□□□□ 0.23
TSPAN3-203ENST00000424443 IGHV3-64A0A075B6Q5 118 aa16.45■□□□□ 0.22
TSPAN3-203ENST00000424443 SPAG11BQ08648 103 aa16.45■□□□□ 0.22
TSPAN3-203ENST00000424443 IGLV4-69A0A075B6H9 119 aa16.45■□□□□ 0.22
TSPAN3-203ENST00000424443 TINCRA0A1B0GVN0 87 aa16.45■□□□□ 0.22
TSPAN3-203ENST00000424443 HIST1H2BKO60814 126 aa16.45■□□□□ 0.22
TSPAN3-203ENST00000424443 HIST1H2BJP06899 126 aa16.45■□□□□ 0.22
TSPAN3-203ENST00000424443 HIST1H2BOP23527 126 aa16.45■□□□□ 0.22
TSPAN3-203ENST00000424443 HIST1H2BBP33778 126 aa16.45■□□□□ 0.22
TSPAN3-203ENST00000424443 HIST1H2BDP58876 126 aa16.45■□□□□ 0.22
TSPAN3-203ENST00000424443 HIST1H2BCP62807 126 aa16.45■□□□□ 0.22
TSPAN3-203ENST00000424443 HIST2H2BEQ16778 126 aa16.45■□□□□ 0.22
TSPAN3-203ENST00000424443 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.45■□□□□ 0.22
TSPAN3-203ENST00000424443 HIST1H2BHQ93079 126 aa16.45■□□□□ 0.22
TSPAN3-203ENST00000424443 HIST1H2BNQ99877 126 aa16.45■□□□□ 0.22
TSPAN3-203ENST00000424443 HIST1H2BMQ99879 126 aa16.45■□□□□ 0.22
TSPAN3-203ENST00000424443 LRP1BQ9NZR2 4599 aa16.45■□□□□ 0.22
TSPAN3-203ENST00000424443 LINC01561Q8N1V8 128 aa16.44■□□□□ 0.22
TSPAN3-203ENST00000424443 IFI27L1Q96BM0 104 aa16.43■□□□□ 0.22
TSPAN3-203ENST00000424443 PACRGQ96M98 296 aaPredicted RBP16.43■□□□□ 0.22
TSPAN3-203ENST00000424443 SYCNQ0VAF6 134 aa16.42■□□□□ 0.22
TSPAN3-203ENST00000424443 LINC00469Q8N7U9 141 aa16.42■□□□□ 0.22
TSPAN3-203ENST00000424443 CARD19Q96LW7 228 aa16.42■□□□□ 0.22
TSPAN3-203ENST00000424443 CAMK2N2Q96S95 79 aa16.42■□□□□ 0.22
TSPAN3-203ENST00000424443 LINC00310P59036 64 aa16.41■□□□□ 0.22
TSPAN3-203ENST00000424443 C2orf48Q96LS8 159 aa16.41■□□□□ 0.22
TSPAN3-203ENST00000424443 CDKN2A-AS1Q9UH64 79 aa16.41■□□□□ 0.22
TSPAN3-203ENST00000424443 LEPROTL1O95214 131 aa16.4■□□□□ 0.22
TSPAN3-203ENST00000424443 FAM30AQ9NZY2 134 aa16.39■□□□□ 0.21
TSPAN3-203ENST00000424443 NUPR1O60356 82 aa16.38■□□□□ 0.21
TSPAN3-203ENST00000424443 PRSS2P07478 247 aa16.37■□□□□ 0.21
TSPAN3-203ENST00000424443 CHAC1Q9BUX1 264 aa16.37■□□□□ 0.21
TSPAN3-203ENST00000424443 PKIGQ9Y2B9 76 aa16.37■□□□□ 0.21
TSPAN3-203ENST00000424443 F8WDY8 70 aa16.36■□□□□ 0.21
TSPAN3-203ENST00000424443 SDIM1Q6ZPB5 146 aa16.36■□□□□ 0.21
TSPAN3-203ENST00000424443 TOMM7Q9P0U1 55 aa16.36■□□□□ 0.21
TSPAN3-203ENST00000424443 HSPB8Q9UJY1 196 aa16.36■□□□□ 0.21
TSPAN3-203ENST00000424443 H3BRM9 83 aa16.35■□□□□ 0.21
TSPAN3-203ENST00000424443 IGLC3P0DOY3 106 aa16.35■□□□□ 0.21
TSPAN3-203ENST00000424443 Q6ZRU5 148 aa16.35■□□□□ 0.21
TSPAN3-203ENST00000424443 Q6ZSA8 131 aa16.35■□□□□ 0.21
TSPAN3-203ENST00000424443 CHTOPQ9Y3Y2 248 aaKnown RBP16.35■□□□□ 0.21
TSPAN3-203ENST00000424443 IGLV5-45A0A087WSX0 123 aa16.35■□□□□ 0.21
TSPAN3-203ENST00000424443 NDUFA1O15239 70 aa16.35■□□□□ 0.21
TSPAN3-203ENST00000424443 FABP4P15090 132 aa16.35■□□□□ 0.21
TSPAN3-203ENST00000424443 XGP55808 180 aa16.35■□□□□ 0.21
TSPAN3-203ENST00000424443 TRAV12-1A0A0B4J245 112 aa16.34■□□□□ 0.21
TSPAN3-203ENST00000424443 C6orf226Q5I0X4 101 aa16.33■□□□□ 0.2
TSPAN3-203ENST00000424443 H0Y8G0 127 aa16.32■□□□□ 0.2
TSPAN3-203ENST00000424443 HAMPP81172 84 aa16.32■□□□□ 0.2
TSPAN3-203ENST00000424443 KIAA0087Q14695 138 aa16.31■□□□□ 0.2
TSPAN3-203ENST00000424443 DPH3Q96FX2 82 aa16.31■□□□□ 0.2
TSPAN3-203ENST00000424443 CKS1BP61024 79 aa16.3■□□□□ 0.2
TSPAN3-203ENST00000424443 Q8IZM0 81 aa16.3■□□□□ 0.2
TSPAN3-203ENST00000424443 SMIM1B2RUZ4 78 aa16.29■□□□□ 0.2
TSPAN3-203ENST00000424443 SPINK8P0C7L1 97 aa16.29■□□□□ 0.2
TSPAN3-203ENST00000424443 MRPL35Q9NZE8 188 aaKnown RBP16.29■□□□□ 0.2
TSPAN3-203ENST00000424443 ZNF22P17026 224 aaPredicted RBP16.28■□□□□ 0.2
TSPAN3-203ENST00000424443 TMEM170BQ5T4T1 132 aa16.28■□□□□ 0.2
TSPAN3-203ENST00000424443 UNQ6190/PRO20217Q6UXQ8 127 aa16.28■□□□□ 0.2
TSPAN3-203ENST00000424443 C11orf86A6NJI1 115 aa16.27■□□□□ 0.2
TSPAN3-203ENST00000424443 F8VRH5 84 aa16.27■□□□□ 0.2
TSPAN3-203ENST00000424443 RNF151Q2KHN1 245 aa16.27■□□□□ 0.2
TSPAN3-203ENST00000424443 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP16.27■□□□□ 0.2
TSPAN3-203ENST00000424443 KIAA1109Q2LD37 5005 aa16.27■□□□□ 0.19
TSPAN3-203ENST00000424443 IGKV2-24A0A0C4DH68 120 aa16.26■□□□□ 0.19
TSPAN3-203ENST00000424443 LOC107984640A0A0U1RRK4 108 aa16.26■□□□□ 0.19
TSPAN3-203ENST00000424443 C2orf82Q6UX34 121 aa16.26■□□□□ 0.19
TSPAN3-203ENST00000424443 SCXQ7RTU7 201 aa16.26■□□□□ 0.19
TSPAN3-203ENST00000424443 MAP1LC3CQ9BXW4 147 aa16.26■□□□□ 0.19
TSPAN3-203ENST00000424443 C10orf25Q5T742 122 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms