RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 HRNRQ86YZ3 2850 aaPredicted RBP7.04□□□□□ -1.28
CMSS1-201ENST00000421999 NUPR2A6NF83 97 aa7.04□□□□□ -1.28
CMSS1-201ENST00000421999 DEFB105AQ8NG35 78 aa7.04□□□□□ -1.28
CMSS1-201ENST00000421999 C9orf85Q96MD7 179 aa7.04□□□□□ -1.28
CMSS1-201ENST00000421999 UBR5O95071 2799 aaPredicted RBP7.04□□□□□ -1.28
CMSS1-201ENST00000421999 CXCL5P42830 114 aa7.04□□□□□ -1.28
CMSS1-201ENST00000421999 DCHS2Q6V1P9 2916 aa7.04□□□□□ -1.28
CMSS1-201ENST00000421999 LELP1Q5T871 98 aa7.04□□□□□ -1.28
CMSS1-201ENST00000421999 OVOL2Q9BRP0 275 aa7.04□□□□□ -1.28
CMSS1-201ENST00000421999 NBEAL1Q6ZS30 2694 aa7.04□□□□□ -1.28
CMSS1-201ENST00000421999 C9JAW5 83 aa7.03□□□□□ -1.28
CMSS1-201ENST00000421999 CDKN2A-AS1Q9UH64 79 aa7.03□□□□□ -1.28
CMSS1-201ENST00000421999 GAS8-AS1O95177 125 aa7.03□□□□□ -1.28
CMSS1-201ENST00000421999 RNF185Q96GF1 192 aa7.03□□□□□ -1.28
CMSS1-201ENST00000421999 PRO1854Q9UHT4 67 aa7.03□□□□□ -1.28
CMSS1-201ENST00000421999 UBE2AP49459 152 aa7.03□□□□□ -1.28
CMSS1-201ENST00000421999 BSNQ9UPA5 3926 aa7.03□□□□□ -1.28
CMSS1-201ENST00000421999 CITED1Q99966 193 aa7.03□□□□□ -1.28
CMSS1-201ENST00000421999 MIR7-3HGQ8N6C7 128 aa7.02□□□□□ -1.29
CMSS1-201ENST00000421999 LINC00526Q96FQ7 95 aa7.02□□□□□ -1.29
CMSS1-201ENST00000421999 MIAQ16674 131 aa7.02□□□□□ -1.29
CMSS1-201ENST00000421999 LINC01545Q5VT33 79 aa7.02□□□□□ -1.29
CMSS1-201ENST00000421999 TRAV12-1A0A0B4J245 112 aa7.01□□□□□ -1.29
CMSS1-201ENST00000421999 CRYBA4P53673 196 aa7.01□□□□□ -1.29
CMSS1-201ENST00000421999 ODF1Q14990 250 aa7.01□□□□□ -1.29
CMSS1-201ENST00000421999 IGHV1-58A0A0C4DH39 117 aa7.01□□□□□ -1.29
CMSS1-201ENST00000421999 LRCOL1A6NCL2 159 aa7.01□□□□□ -1.29
CMSS1-201ENST00000421999 COX8CQ7Z4L0 72 aa7.01□□□□□ -1.29
CMSS1-201ENST00000421999 NFE4Q86UQ8 179 aa7.01□□□□□ -1.29
CMSS1-201ENST00000421999 IGLV4-3A0A075B6K6 122 aa7□□□□□ -1.29
CMSS1-201ENST00000421999 TRBV27A0A0K0K1C4 114 aa7□□□□□ -1.29
CMSS1-201ENST00000421999 NHLRC4P0CG21 123 aaPredicted RBP7□□□□□ -1.29
CMSS1-201ENST00000421999 BEAN1Q3B7T3 259 aa7□□□□□ -1.29
CMSS1-201ENST00000421999 NCR3O14931 201 aa7□□□□□ -1.29
CMSS1-201ENST00000421999 CNFNQ9BYD5 112 aa7□□□□□ -1.29
CMSS1-201ENST00000421999 XAGE1AQ9HD64 81 aa7□□□□□ -1.29
CMSS1-201ENST00000421999 HIVEP1P15822 2718 aa6.99□□□□□ -1.29
CMSS1-201ENST00000421999 TRAV8-4A0A0B4J246 113 aa6.99□□□□□ -1.29
CMSS1-201ENST00000421999 K7ERJ3 54 aa6.99□□□□□ -1.29
CMSS1-201ENST00000421999 IFITM1P13164 125 aa6.99□□□□□ -1.29
CMSS1-201ENST00000421999 SYCNQ0VAF6 134 aa6.99□□□□□ -1.29
CMSS1-201ENST00000421999 TRBV6-5A0A0K0K1A5 114 aa6.99□□□□□ -1.29
CMSS1-201ENST00000421999 H7C423 109 aa6.99□□□□□ -1.29
CMSS1-201ENST00000421999 Q6ZVH6 145 aa6.99□□□□□ -1.29
CMSS1-201ENST00000421999 MUSTN1Q8IVN3 82 aa6.99□□□□□ -1.29
CMSS1-201ENST00000421999 A4D1N5 150 aa6.98□□□□□ -1.29
CMSS1-201ENST00000421999 KRTAP10-3P60369 221 aa6.98□□□□□ -1.29
CMSS1-201ENST00000421999 CEND1Q8N111 149 aa6.98□□□□□ -1.29
CMSS1-201ENST00000421999 E9PLD3 99 aa6.98□□□□□ -1.29
CMSS1-201ENST00000421999 A0A087WZ39 114 aa6.98□□□□□ -1.29
CMSS1-201ENST00000421999 UBE2D3P61077 147 aa6.98□□□□□ -1.29
CMSS1-201ENST00000421999 UBE2D2P62837 147 aa6.98□□□□□ -1.29
CMSS1-201ENST00000421999 RBMY1FQ15415 496 aaKnown RBP6.98□□□□□ -1.29
CMSS1-201ENST00000421999 UFSP1Q6NVU6 142 aa6.97□□□□□ -1.29
CMSS1-201ENST00000421999 CARD19Q96LW7 228 aa6.97□□□□□ -1.29
CMSS1-201ENST00000421999 ANAPC13Q9BS18 74 aa6.97□□□□□ -1.29
CMSS1-201ENST00000421999 HIGD2AQ9BW72 106 aa6.97□□□□□ -1.29
CMSS1-201ENST00000421999 POLR2KP53803 58 aaKnown RBP6.97□□□□□ -1.29
CMSS1-201ENST00000421999 BVES-AS1Q5T3Y7 98 aa6.97□□□□□ -1.29
CMSS1-201ENST00000421999 NRACQ8N912 160 aa6.97□□□□□ -1.29
CMSS1-201ENST00000421999 TINCRA0A1B0GVN0 87 aa6.97□□□□□ -1.29
CMSS1-201ENST00000421999 TSHBP01222 138 aa6.97□□□□□ -1.29
CMSS1-201ENST00000421999 PIK3CD-AS1Q5SR53 167 aa6.97□□□□□ -1.29
CMSS1-201ENST00000421999 SBSPONQ8IVN8 264 aa6.97□□□□□ -1.29
CMSS1-201ENST00000421999 CFC1BP0CG36 223 aa6.96□□□□□ -1.29
CMSS1-201ENST00000421999 CFC1P0CG37 223 aa6.96□□□□□ -1.29
CMSS1-201ENST00000421999 GAGE2AQ6NT46 116 aa6.96□□□□□ -1.29
CMSS1-201ENST00000421999 FHL2Q14192 279 aa6.96□□□□□ -1.3
CMSS1-201ENST00000421999 ASH1LQ9NR48 2969 aaKnown RBP6.96□□□□□ -1.3
CMSS1-201ENST00000421999 CD164L2Q6UWJ8 174 aa6.95□□□□□ -1.3
CMSS1-201ENST00000421999 C12orf74Q32Q52 190 aa6.95□□□□□ -1.3
CMSS1-201ENST00000421999 SMG1Q96Q15 3661 aaKnown RBP6.95□□□□□ -1.3
CMSS1-201ENST00000421999 TRBV20-1A0A075B6N2 111 aa6.95□□□□□ -1.3
CMSS1-201ENST00000421999 LINC00959A0A1B0GUT2 108 aa6.95□□□□□ -1.3
CMSS1-201ENST00000421999 ZNF22P17026 224 aaPredicted RBP6.95□□□□□ -1.3
CMSS1-201ENST00000421999 C4orf48Q5BLP8 95 aa6.94□□□□□ -1.3
CMSS1-201ENST00000421999 FAM19A5Q7Z5A7 132 aaPredicted RBP6.94□□□□□ -1.3
CMSS1-201ENST00000421999 HIST1H4AP62805 103 aaKnown RBP6.94□□□□□ -1.3
CMSS1-201ENST00000421999 WFDC9Q8NEX5 89 aa6.94□□□□□ -1.3
CMSS1-201ENST00000421999 CELA1Q9UNI1 258 aa6.94□□□□□ -1.3
CMSS1-201ENST00000421999 FAM19A4Q96LR4 140 aa6.93□□□□□ -1.3
CMSS1-201ENST00000421999 DSCR8Q96T75 97 aa6.93□□□□□ -1.3
CMSS1-201ENST00000421999 DIRC1Q969H9 104 aa6.93□□□□□ -1.3
CMSS1-201ENST00000421999 A8MZ25 164 aa6.92□□□□□ -1.3
CMSS1-201ENST00000421999 RPL32P62910 135 aaKnown RBP6.92□□□□□ -1.3
CMSS1-201ENST00000421999 PYGO1Q9Y3Y4 419 aa6.92□□□□□ -1.3
CMSS1-201ENST00000421999 A0A096LNI7 61 aa6.92□□□□□ -1.3
CMSS1-201ENST00000421999 UBE2D4Q9Y2X8 147 aa6.92□□□□□ -1.3
CMSS1-201ENST00000421999 WFDC10BQ8IUB3 73 aa6.92□□□□□ -1.3
CMSS1-201ENST00000421999 INAFM2P0DMQ5 153 aa6.91□□□□□ -1.3
CMSS1-201ENST00000421999 HAMPP81172 84 aa6.91□□□□□ -1.3
CMSS1-201ENST00000421999 C7orf33Q8WU49 177 aa6.91□□□□□ -1.3
CMSS1-201ENST00000421999 Q6ZSN1 163 aa6.91□□□□□ -1.3
CMSS1-201ENST00000421999 CDC42SE2Q9NRR3 84 aa6.91□□□□□ -1.3
CMSS1-201ENST00000421999 ETDBQ3ZM63 59 aa6.9□□□□□ -1.3
CMSS1-201ENST00000421999 C9orf118A6NHY6 69 aa6.9□□□□□ -1.3
CMSS1-201ENST00000421999 H3BMG7 143 aa6.9□□□□□ -1.3
CMSS1-201ENST00000421999 LINC00310P59036 64 aa6.9□□□□□ -1.3
CMSS1-201ENST00000421999 C11orf72Q8NBR9 251 aa6.9□□□□□ -1.3
CMSS1-201ENST00000421999 IGLV4-60A0A075B6I1 120 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms