RNA–Protein interactions for RNA: ENST00000421862.1

AC004540.1-203, humanhuman

TSL 5 BASIC

Gene AC004540.1, Length 907 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-203ENST00000421862 MRPS36P82909 103 aaKnown RBP11.3□□□□□ -0.6
AC004540.1-203ENST00000421862 FAM74A3Q4VXF1 159 aa11.3□□□□□ -0.6
AC004540.1-203ENST00000421862 KRTAP11-1Q8IUC1 163 aa11.3□□□□□ -0.6
AC004540.1-203ENST00000421862 DIRC1Q969H9 104 aa11.3□□□□□ -0.6
AC004540.1-203ENST00000421862 SPANXA1Q9NS26 97 aa11.3□□□□□ -0.6
AC004540.1-203ENST00000421862 SMIM27A0A1W2PRY6 76 aa11.29□□□□□ -0.6
AC004540.1-203ENST00000421862 NDUFA1O15239 70 aa11.29□□□□□ -0.6
AC004540.1-203ENST00000421862 RPL23P62829 140 aaKnown RBP11.29□□□□□ -0.6
AC004540.1-203ENST00000421862 IMMP2LQ96T52 175 aa11.29□□□□□ -0.6
AC004540.1-203ENST00000421862 SMIM2Q9BVW6 85 aa11.29□□□□□ -0.6
AC004540.1-203ENST00000421862 A0A1B0GW15 77 aa11.28□□□□□ -0.6
AC004540.1-203ENST00000421862 FAM168BA1KXE4 195 aa11.28□□□□□ -0.6
AC004540.1-203ENST00000421862 H0Y9J4 135 aa11.28□□□□□ -0.6
AC004540.1-203ENST00000421862 C10orf25Q5T742 122 aa11.28□□□□□ -0.6
AC004540.1-203ENST00000421862 C6orf48Q9UBA6 75 aa11.28□□□□□ -0.6
AC004540.1-203ENST00000421862 TNFRSF6BO95407 300 aa11.27□□□□□ -0.61
AC004540.1-203ENST00000421862 PRR26Q8N8Z3 221 aa11.27□□□□□ -0.61
AC004540.1-203ENST00000421862 CKS2P33552 79 aa11.26□□□□□ -0.61
AC004540.1-203ENST00000421862 TMEM241Q24JQ0 296 aa11.26□□□□□ -0.61
AC004540.1-203ENST00000421862 KRTAP7-1Q8IUC3 87 aa11.26□□□□□ -0.61
AC004540.1-203ENST00000421862 SMDT1Q9H4I9 107 aa11.26□□□□□ -0.61
AC004540.1-203ENST00000421862 KRTAP1-4P0C5Y4 121 aa11.25□□□□□ -0.61
AC004540.1-203ENST00000421862 HBBP68871 147 aa11.25□□□□□ -0.61
AC004540.1-203ENST00000421862 IFITM10A6NMD0 228 aa11.24□□□□□ -0.61
AC004540.1-203ENST00000421862 D6R8Y8 96 aa11.24□□□□□ -0.61
AC004540.1-203ENST00000421862 KIAA0087Q14695 138 aa11.24□□□□□ -0.61
AC004540.1-203ENST00000421862 ADIRFQ15847 76 aa11.24□□□□□ -0.61
AC004540.1-203ENST00000421862 UNQ6190/PRO20217Q6UXQ8 127 aa11.24□□□□□ -0.61
AC004540.1-203ENST00000421862 FAM19A5Q7Z5A7 132 aaPredicted RBP11.24□□□□□ -0.61
AC004540.1-203ENST00000421862 NAT8Q9UHE5 227 aa11.24□□□□□ -0.61
AC004540.1-203ENST00000421862 IGLV1-50A0A075B6I6 118 aa11.23□□□□□ -0.61
AC004540.1-203ENST00000421862 A0A087WZ39 114 aa11.23□□□□□ -0.61
AC004540.1-203ENST00000421862 A0A1B0GXF2 115 aa11.23□□□□□ -0.61
AC004540.1-203ENST00000421862 NPYP01303 97 aa11.23□□□□□ -0.61
AC004540.1-203ENST00000421862 TGIF2-C20orf24A0A0A6YYL0 155 aa11.21□□□□□ -0.61
AC004540.1-203ENST00000421862 C9JQL5 133 aa11.21□□□□□ -0.61
AC004540.1-203ENST00000421862 TRBV30A0A0K0K1B3 111 aa11.2□□□□□ -0.62
AC004540.1-203ENST00000421862 M0QXV9 152 aa11.2□□□□□ -0.62
AC004540.1-203ENST00000421862 PPBPP02775 128 aa11.2□□□□□ -0.62
AC004540.1-203ENST00000421862 S100A8P05109 93 aa11.2□□□□□ -0.62
AC004540.1-203ENST00000421862 PYGO1Q9Y3Y4 419 aa11.2□□□□□ -0.62
AC004540.1-203ENST00000421862 F8W036 122 aa11.19□□□□□ -0.62
AC004540.1-203ENST00000421862 GAGE2EQ4V326 116 aa11.19□□□□□ -0.62
AC004540.1-203ENST00000421862 LINC00242Q5T6M2 205 aa11.19□□□□□ -0.62
AC004540.1-203ENST00000421862 MRPL54Q6P161 138 aaKnown RBP11.19□□□□□ -0.62
AC004540.1-203ENST00000421862 GAGE2DQ9UEU5 116 aa11.19□□□□□ -0.62
AC004540.1-203ENST00000421862 IGLV4-3A0A075B6K6 122 aa11.18□□□□□ -0.62
AC004540.1-203ENST00000421862 IFI27P40305 119 aaPredicted RBP11.18□□□□□ -0.62
AC004540.1-203ENST00000421862 NDUFC2-KCTD14E9PQ53 114 aa11.17□□□□□ -0.62
AC004540.1-203ENST00000421862 C9orf129Q5T035 196 aaKnown RBP11.17□□□□□ -0.62
AC004540.1-203ENST00000421862 SRSF3P84103 164 aaKnown RBP11.16□□□□□ -0.62
AC004540.1-203ENST00000421862 ORMDL3Q8N138 153 aa11.16□□□□□ -0.62
AC004540.1-203ENST00000421862 LINC01561Q8N1V8 128 aa11.16□□□□□ -0.62
AC004540.1-203ENST00000421862 MUC2Q02817 5179 aa11.16□□□□□ -0.62
AC004540.1-203ENST00000421862 RPL13AP40429 203 aaKnown RBP11.15□□□□□ -0.62
AC004540.1-203ENST00000421862 UBE2BP63146 152 aa11.15□□□□□ -0.62
AC004540.1-203ENST00000421862 C2orf82Q6UX34 121 aa11.15□□□□□ -0.62
AC004540.1-203ENST00000421862 TMEM141Q96I45 108 aa11.15□□□□□ -0.62
AC004540.1-203ENST00000421862 PRSS47A8MTI9 375 aa11.14□□□□□ -0.63
AC004540.1-203ENST00000421862 UBE2D1P51668 147 aa11.14□□□□□ -0.63
AC004540.1-203ENST00000421862 ATP5L2Q7Z4Y8 100 aa11.14□□□□□ -0.63
AC004540.1-203ENST00000421862 PRELID3AQ96N28 172 aa11.13□□□□□ -0.63
AC004540.1-203ENST00000421862 RAB5AP20339 215 aa11.12□□□□□ -0.63
AC004540.1-203ENST00000421862 TEX43Q6ZNM6 134 aa11.12□□□□□ -0.63
AC004540.1-203ENST00000421862 LINC00173Q6ZV60 143 aa11.12□□□□□ -0.63
AC004540.1-203ENST00000421862 PACRGQ96M98 296 aaPredicted RBP11.12□□□□□ -0.63
AC004540.1-203ENST00000421862 CARHSP1Q9Y2V2 147 aaKnown RBP11.12□□□□□ -0.63
AC004540.1-203ENST00000421862 PEA15Q15121 130 aa11.11□□□□□ -0.63
AC004540.1-203ENST00000421862 TMEM136Q6ZRR5 245 aa11.11□□□□□ -0.63
AC004540.1-203ENST00000421862 LAMTOR2Q9Y2Q5 125 aa11.11□□□□□ -0.63
AC004540.1-203ENST00000421862 FAM19A3Q7Z5A8 133 aa11.1□□□□□ -0.63
AC004540.1-203ENST00000421862 AMELXQ99217 191 aa11.1□□□□□ -0.63
AC004540.1-203ENST00000421862 A0A1B0GVG6 124 aa11.09□□□□□ -0.63
AC004540.1-203ENST00000421862 C2orf88Q9BSF0 95 aa11.09□□□□□ -0.63
AC004540.1-203ENST00000421862 ZNF861PO60384 105 aa11.08□□□□□ -0.64
AC004540.1-203ENST00000421862 NPSP0C0P6 89 aa11.08□□□□□ -0.64
AC004540.1-203ENST00000421862 NUPR1O60356 82 aa11.07□□□□□ -0.64
AC004540.1-203ENST00000421862 C2orf66Q6UXQ4 117 aa11.07□□□□□ -0.64
AC004540.1-203ENST00000421862 Q8IZM0 81 aa11.07□□□□□ -0.64
AC004540.1-203ENST00000421862 CYSLTR1Q9Y271 337 aa11.07□□□□□ -0.64
AC004540.1-203ENST00000421862 PRR4Q16378 134 aa11.06□□□□□ -0.64
AC004540.1-203ENST00000421862 ZC2HC1BQ5TFG8 222 aa11.06□□□□□ -0.64
AC004540.1-203ENST00000421862 Q6ZN92 141 aa11.06□□□□□ -0.64
AC004540.1-203ENST00000421862 MAP1LC3AQ9H492 121 aa11.06□□□□□ -0.64
AC004540.1-203ENST00000421862 Q8N8P6 123 aa11.05□□□□□ -0.64
AC004540.1-203ENST00000421862 IGIPA6NJ69 53 aa11.04□□□□□ -0.64
AC004540.1-203ENST00000421862 PRSS2P07478 247 aa11.04□□□□□ -0.64
AC004540.1-203ENST00000421862 C22orf24Q9Y442 160 aa11.04□□□□□ -0.64
AC004540.1-203ENST00000421862 LOC389332A0A1B0GUA5 103 aa11.03□□□□□ -0.64
AC004540.1-203ENST00000421862 K7EMI3 77 aa11.03□□□□□ -0.64
AC004540.1-203ENST00000421862 CKS1BP61024 79 aa11.03□□□□□ -0.64
AC004540.1-203ENST00000421862 ORMDL2Q53FV1 153 aa11.03□□□□□ -0.64
AC004540.1-203ENST00000421862 LINC00469Q8N7U9 141 aa11.03□□□□□ -0.64
AC004540.1-203ENST00000421862 TP73-AS1Q9UF72 201 aa11.03□□□□□ -0.64
AC004540.1-203ENST00000421862 VCX2Q9H322 139 aa11.02□□□□□ -0.65
AC004540.1-203ENST00000421862 XAGE1AQ9HD64 81 aa11.02□□□□□ -0.65
AC004540.1-203ENST00000421862 TOMM7Q9P0U1 55 aa11.02□□□□□ -0.65
AC004540.1-203ENST00000421862 LBHQ53QV2 105 aaPredicted RBP11.01□□□□□ -0.65
AC004540.1-203ENST00000421862 A0A087X002 238 aa11□□□□□ -0.65
AC004540.1-203ENST00000421862 F8VRH5 84 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms