RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 ZNF727A8MUV8 499 aa10.16□□□□□ -0.78
UPF3AP3-201ENST00000420996 C10orf25Q5T742 122 aa10.16□□□□□ -0.78
UPF3AP3-201ENST00000420996 FAM104AQ969W3 186 aa10.16□□□□□ -0.78
UPF3AP3-201ENST00000420996 C20orf78Q9BR46 151 aa10.16□□□□□ -0.78
UPF3AP3-201ENST00000420996 V9GYV3 84 aa10.16□□□□□ -0.78
UPF3AP3-201ENST00000420996 TCAPO15273 167 aa10.15□□□□□ -0.78
UPF3AP3-201ENST00000420996 KRTAP1-4P0C5Y4 121 aa10.15□□□□□ -0.78
UPF3AP3-201ENST00000420996 RPL39P62891 51 aaKnown RBP10.15□□□□□ -0.78
UPF3AP3-201ENST00000420996 RPL32P62910 135 aaKnown RBP10.15□□□□□ -0.78
UPF3AP3-201ENST00000420996 MRPL51Q4U2R6 128 aaKnown RBP10.15□□□□□ -0.78
UPF3AP3-201ENST00000420996 FAM104BQ5XKR9 115 aa10.15□□□□□ -0.78
UPF3AP3-201ENST00000420996 UNQ6190/PRO20217Q6UXQ8 127 aa10.15□□□□□ -0.78
UPF3AP3-201ENST00000420996 FAM19A5Q7Z5A7 132 aaPredicted RBP10.15□□□□□ -0.78
UPF3AP3-201ENST00000420996 EIF5A2Q9GZV4 153 aaKnown RBP10.15□□□□□ -0.78
UPF3AP3-201ENST00000420996 TRBV24-1A0A075B6N3 115 aa10.14□□□□□ -0.79
UPF3AP3-201ENST00000420996 LINC00862A6NCI5 91 aa10.14□□□□□ -0.79
UPF3AP3-201ENST00000420996 C6orf48Q9UBA6 75 aa10.14□□□□□ -0.79
UPF3AP3-201ENST00000420996 MRPS36P82909 103 aaKnown RBP10.13□□□□□ -0.79
UPF3AP3-201ENST00000420996 GAGE2EQ4V326 116 aa10.13□□□□□ -0.79
UPF3AP3-201ENST00000420996 SMDT1Q9H4I9 107 aa10.13□□□□□ -0.79
UPF3AP3-201ENST00000420996 SPANXA1Q9NS26 97 aa10.13□□□□□ -0.79
UPF3AP3-201ENST00000420996 GAGE2DQ9UEU5 116 aa10.13□□□□□ -0.79
UPF3AP3-201ENST00000420996 NAT8BQ9UHF3 227 aa10.13□□□□□ -0.79
UPF3AP3-201ENST00000420996 KRTAP7-1Q8IUC3 87 aa10.12□□□□□ -0.79
UPF3AP3-201ENST00000420996 SRP19P09132 144 aaKnown RBP10.11□□□□□ -0.79
UPF3AP3-201ENST00000420996 CKS2P33552 79 aa10.11□□□□□ -0.79
UPF3AP3-201ENST00000420996 RPL13AP40429 203 aaKnown RBP10.11□□□□□ -0.79
UPF3AP3-201ENST00000420996 UBE2D1P51668 147 aa10.11□□□□□ -0.79
UPF3AP3-201ENST00000420996 HBBP68871 147 aa10.11□□□□□ -0.79
UPF3AP3-201ENST00000420996 PRR4Q16378 134 aa10.11□□□□□ -0.79
UPF3AP3-201ENST00000420996 IFITM10A6NMD0 228 aa10.1□□□□□ -0.79
UPF3AP3-201ENST00000420996 M0QXV9 152 aa10.1□□□□□ -0.79
UPF3AP3-201ENST00000420996 TNFRSF6BO95407 300 aa10.1□□□□□ -0.79
UPF3AP3-201ENST00000420996 UBE2BP63146 152 aa10.1□□□□□ -0.79
UPF3AP3-201ENST00000420996 KIAA0087Q14695 138 aa10.1□□□□□ -0.79
UPF3AP3-201ENST00000420996 FAM74A3Q4VXF1 159 aa10.1□□□□□ -0.79
UPF3AP3-201ENST00000420996 SMIM2Q9BVW6 85 aa10.1□□□□□ -0.79
UPF3AP3-201ENST00000420996 TGIF2-C20orf24A0A0A6YYL0 155 aa10.09□□□□□ -0.79
UPF3AP3-201ENST00000420996 C9JQL5 133 aa10.09□□□□□ -0.79
UPF3AP3-201ENST00000420996 SRSF3P84103 164 aaKnown RBP10.09□□□□□ -0.79
UPF3AP3-201ENST00000420996 A0A1B0GW15 77 aa10.08□□□□□ -0.8
UPF3AP3-201ENST00000420996 CARHSP1Q9Y2V2 147 aaKnown RBP10.08□□□□□ -0.8
UPF3AP3-201ENST00000420996 TRBV30A0A0K0K1B3 111 aa10.07□□□□□ -0.8
UPF3AP3-201ENST00000420996 SMIM27A0A1W2PRY6 76 aa10.07□□□□□ -0.8
UPF3AP3-201ENST00000420996 NDUFC2-KCTD14E9PQ53 114 aa10.06□□□□□ -0.8
UPF3AP3-201ENST00000420996 RPL23P62829 140 aaKnown RBP10.06□□□□□ -0.8
UPF3AP3-201ENST00000420996 A0A0U1RQV1 116 aa10.05□□□□□ -0.8
UPF3AP3-201ENST00000420996 D6R8Y8 96 aa10.05□□□□□ -0.8
UPF3AP3-201ENST00000420996 NPYP01303 97 aa10.05□□□□□ -0.8
UPF3AP3-201ENST00000420996 C9orf129Q5T035 196 aaKnown RBP10.05□□□□□ -0.8
UPF3AP3-201ENST00000420996 LINC00242Q5T6M2 205 aa10.05□□□□□ -0.8
UPF3AP3-201ENST00000420996 MUC2Q02817 5179 aa10.04□□□□□ -0.8
UPF3AP3-201ENST00000420996 IFI27P40305 119 aaPredicted RBP10.04□□□□□ -0.8
UPF3AP3-201ENST00000420996 C2orf82Q6UX34 121 aa10.04□□□□□ -0.8
UPF3AP3-201ENST00000420996 PACRGQ96M98 296 aaPredicted RBP10.04□□□□□ -0.8
UPF3AP3-201ENST00000420996 PYGO1Q9Y3Y4 419 aa10.04□□□□□ -0.8
UPF3AP3-201ENST00000420996 F8W036 122 aa10.03□□□□□ -0.8
UPF3AP3-201ENST00000420996 ZNF861PO60384 105 aa10.03□□□□□ -0.8
UPF3AP3-201ENST00000420996 S100A8P05109 93 aa10.03□□□□□ -0.8
UPF3AP3-201ENST00000420996 ADIRFQ15847 76 aa10.03□□□□□ -0.8
UPF3AP3-201ENST00000420996 IGLV4-3A0A075B6K6 122 aa10.02□□□□□ -0.81
UPF3AP3-201ENST00000420996 PPBPP02775 128 aa10.02□□□□□ -0.81
UPF3AP3-201ENST00000420996 RAB5AP20339 215 aa10.02□□□□□ -0.81
UPF3AP3-201ENST00000420996 NAT8Q9UHE5 227 aa10.02□□□□□ -0.81
UPF3AP3-201ENST00000420996 LINC01561Q8N1V8 128 aa10.01□□□□□ -0.81
UPF3AP3-201ENST00000420996 TMEM141Q96I45 108 aa10.01□□□□□ -0.81
UPF3AP3-201ENST00000420996 NUPR1O60356 82 aa10□□□□□ -0.81
UPF3AP3-201ENST00000420996 MRPL54Q6P161 138 aaKnown RBP10□□□□□ -0.81
UPF3AP3-201ENST00000420996 A0A1B0GXF2 115 aa9.99□□□□□ -0.81
UPF3AP3-201ENST00000420996 TSPAN13O95857 204 aa9.98□□□□□ -0.81
UPF3AP3-201ENST00000420996 TEX43Q6ZNM6 134 aa9.98□□□□□ -0.81
UPF3AP3-201ENST00000420996 ORMDL3Q8N138 153 aa9.98□□□□□ -0.81
UPF3AP3-201ENST00000420996 KRTAP9-2Q9BYQ4 174 aa9.98□□□□□ -0.81
UPF3AP3-201ENST00000420996 C22orf24Q9Y442 160 aa9.98□□□□□ -0.81
UPF3AP3-201ENST00000420996 PRSS2P07478 247 aa9.97□□□□□ -0.81
UPF3AP3-201ENST00000420996 LBHQ53QV2 105 aaPredicted RBP9.97□□□□□ -0.81
UPF3AP3-201ENST00000420996 TMEM136Q6ZRR5 245 aa9.97□□□□□ -0.81
UPF3AP3-201ENST00000420996 Q6ZN92 141 aa9.96□□□□□ -0.82
UPF3AP3-201ENST00000420996 LINC00469Q8N7U9 141 aa9.96□□□□□ -0.82
UPF3AP3-201ENST00000420996 PRELID3AQ96N28 172 aa9.96□□□□□ -0.82
UPF3AP3-201ENST00000420996 C2orf88Q9BSF0 95 aa9.96□□□□□ -0.82
UPF3AP3-201ENST00000420996 CTDSP1Q9GZU7 261 aa9.96□□□□□ -0.82
UPF3AP3-201ENST00000420996 PRSS47A8MTI9 375 aa9.95□□□□□ -0.82
UPF3AP3-201ENST00000420996 CKS1BP61024 79 aa9.95□□□□□ -0.82
UPF3AP3-201ENST00000420996 C6orf226Q5I0X4 101 aa9.95□□□□□ -0.82
UPF3AP3-201ENST00000420996 TOMM7Q9P0U1 55 aa9.95□□□□□ -0.82
UPF3AP3-201ENST00000420996 PEA15Q15121 130 aa9.94□□□□□ -0.82
UPF3AP3-201ENST00000420996 AMELXQ99217 191 aa9.94□□□□□ -0.82
UPF3AP3-201ENST00000420996 XAGE1AQ9HD64 81 aa9.94□□□□□ -0.82
UPF3AP3-201ENST00000420996 A0A087X002 238 aa9.93□□□□□ -0.82
UPF3AP3-201ENST00000420996 RPL28P46779 137 aaKnown RBP9.93□□□□□ -0.82
UPF3AP3-201ENST00000420996 NDUFA5Q16718 116 aa9.93□□□□□ -0.82
UPF3AP3-201ENST00000420996 ZC2HC1BQ5TFG8 222 aa9.93□□□□□ -0.82
UPF3AP3-201ENST00000420996 LINC00173Q6ZV60 143 aa9.93□□□□□ -0.82
UPF3AP3-201ENST00000420996 ATP5L2Q7Z4Y8 100 aa9.93□□□□□ -0.82
UPF3AP3-201ENST00000420996 Q8IZM0 81 aa9.93□□□□□ -0.82
UPF3AP3-201ENST00000420996 TP73-AS1Q9UF72 201 aa9.93□□□□□ -0.82
UPF3AP3-201ENST00000420996 CRYGAP11844 174 aa9.92□□□□□ -0.82
UPF3AP3-201ENST00000420996 ALKBH7Q9BT30 221 aaPredicted RBP9.92□□□□□ -0.82
UPF3AP3-201ENST00000420996 VCX2Q9H322 139 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 135.4 ms