RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 C20orf78Q9BR46 151 aa5.97□□□□□ -1.45
NUP50-205ENST00000419387 CDC42SE2Q9NRR3 84 aa5.97□□□□□ -1.45
NUP50-205ENST00000419387 TGIF2-C20orf24A0A0A6YYL0 155 aa5.96□□□□□ -1.46
NUP50-205ENST00000419387 VCYO14598 125 aa5.96□□□□□ -1.46
NUP50-205ENST00000419387 PPBPP02775 128 aa5.96□□□□□ -1.46
NUP50-205ENST00000419387 CKS2P33552 79 aa5.96□□□□□ -1.46
NUP50-205ENST00000419387 SS18Q15532 418 aa5.96□□□□□ -1.46
NUP50-205ENST00000419387 NDUFA5Q16718 116 aa5.96□□□□□ -1.46
NUP50-205ENST00000419387 MAJINQ3KP22 176 aa5.96□□□□□ -1.46
NUP50-205ENST00000419387 MRPL52Q86TS9 123 aaKnown RBP5.96□□□□□ -1.46
NUP50-205ENST00000419387 ZNF664Q8N3J9 261 aa5.96□□□□□ -1.46
NUP50-205ENST00000419387 GNB1LQ9BYB4 327 aa5.96□□□□□ -1.46
NUP50-205ENST00000419387 HMCN2Q8NDA2 5059 aa5.95□□□□□ -1.46
NUP50-205ENST00000419387 IGHV1-58A0A0C4DH39 117 aa5.95□□□□□ -1.46
NUP50-205ENST00000419387 IGKV2-24A0A0C4DH68 120 aa5.95□□□□□ -1.46
NUP50-205ENST00000419387 PHOX2AO14813 284 aa5.95□□□□□ -1.46
NUP50-205ENST00000419387 EIF4EBP3O60516 100 aaPredicted RBP5.95□□□□□ -1.46
NUP50-205ENST00000419387 PPP1R17O96001 155 aa5.95□□□□□ -1.46
NUP50-205ENST00000419387 KIAA1644Q3SXP7 199 aa5.95□□□□□ -1.46
NUP50-205ENST00000419387 CD164L2Q6UWJ8 174 aa5.95□□□□□ -1.46
NUP50-205ENST00000419387 C7orf33Q8WU49 177 aa5.95□□□□□ -1.46
NUP50-205ENST00000419387 PRELID3AQ96N28 172 aa5.95□□□□□ -1.46
NUP50-205ENST00000419387 FCER1GP30273 86 aa5.94□□□□□ -1.46
NUP50-205ENST00000419387 SMAGPQ0VAQ4 97 aa5.94□□□□□ -1.46
NUP50-205ENST00000419387 ORMDL3Q8N138 153 aa5.94□□□□□ -1.46
NUP50-205ENST00000419387 STPG4Q8N801 248 aa5.94□□□□□ -1.46
NUP50-205ENST00000419387 LINC00526Q96FQ7 95 aa5.94□□□□□ -1.46
NUP50-205ENST00000419387 A0A096LNI7 61 aa5.93□□□□□ -1.46
NUP50-205ENST00000419387 ZNF561-AS1K7EIQ3 104 aa5.93□□□□□ -1.46
NUP50-205ENST00000419387 MT1HL1P0DM35 61 aa5.93□□□□□ -1.46
NUP50-205ENST00000419387 S100PP25815 95 aa5.93□□□□□ -1.46
NUP50-205ENST00000419387 CBLN2Q8IUK8 224 aa5.93□□□□□ -1.46
NUP50-205ENST00000419387 CARD19Q96LW7 228 aa5.93□□□□□ -1.46
NUP50-205ENST00000419387 KIR2DL4Q99706 377 aa5.93□□□□□ -1.46
NUP50-205ENST00000419387 ALKBH7Q9BT30 221 aaPredicted RBP5.93□□□□□ -1.46
NUP50-205ENST00000419387 SMIM2Q9BVW6 85 aa5.93□□□□□ -1.46
NUP50-205ENST00000419387 LINC00474Q9P2X8 69 aa5.93□□□□□ -1.46
NUP50-205ENST00000419387 PLA2G2DQ9UNK4 145 aa5.93□□□□□ -1.46
NUP50-205ENST00000419387 PKIGQ9Y2B9 76 aa5.93□□□□□ -1.46
NUP50-205ENST00000419387 CSDC2Q9Y534 153 aaKnown RBP5.93□□□□□ -1.46
NUP50-205ENST00000419387 KRTAP9-7A8MTY7 169 aa5.92□□□□□ -1.46
NUP50-205ENST00000419387 C1orf196B1AJZ1 125 aa5.92□□□□□ -1.46
NUP50-205ENST00000419387 TCAPO15273 167 aa5.92□□□□□ -1.46
NUP50-205ENST00000419387 SYCNQ0VAF6 134 aa5.92□□□□□ -1.46
NUP50-205ENST00000419387 TMEM18Q96B42 140 aa5.92□□□□□ -1.46
NUP50-205ENST00000419387 LAMTOR2Q9Y2Q5 125 aa5.92□□□□□ -1.46
NUP50-205ENST00000419387 UBE2D4Q9Y2X8 147 aa5.92□□□□□ -1.46
NUP50-205ENST00000419387 LINC01546A6NGU7 62 aa5.91□□□□□ -1.46
NUP50-205ENST00000419387 COLCA2A8K830 154 aa5.91□□□□□ -1.46
NUP50-205ENST00000419387 MALP21145 153 aa5.91□□□□□ -1.46
NUP50-205ENST00000419387 RPL39P62891 51 aaKnown RBP5.91□□□□□ -1.46
NUP50-205ENST00000419387 Q8N8P6 123 aa5.91□□□□□ -1.46
NUP50-205ENST00000419387 URB1-AS1Q96HZ7 61 aa5.91□□□□□ -1.46
NUP50-205ENST00000419387 LOC389332A0A1B0GUA5 103 aa5.9□□□□□ -1.46
NUP50-205ENST00000419387 COX7A2LO14548 114 aa5.9□□□□□ -1.46
NUP50-205ENST00000419387 IFI27P40305 119 aaPredicted RBP5.9□□□□□ -1.46
NUP50-205ENST00000419387 PRR3P79522 188 aaKnown RBP5.9□□□□□ -1.46
NUP50-205ENST00000419387 COX19Q49B96 90 aa5.9□□□□□ -1.46
NUP50-205ENST00000419387 RNASE13Q5GAN3 156 aaKnown RBP5.9□□□□□ -1.46
NUP50-205ENST00000419387 TIMM21Q9BVV7 248 aa5.9□□□□□ -1.46
NUP50-205ENST00000419387 SMCO4Q9NRQ5 59 aa5.9□□□□□ -1.46
NUP50-205ENST00000419387 IGLV4-69A0A075B6H9 119 aa5.89□□□□□ -1.47
NUP50-205ENST00000419387 TRAV13-1A0A0B4J241 112 aa5.89□□□□□ -1.47
NUP50-205ENST00000419387 LOC107984640A0A0U1RRK4 108 aa5.89□□□□□ -1.47
NUP50-205ENST00000419387 SCO1O75880 301 aa5.89□□□□□ -1.47
NUP50-205ENST00000419387 MT-ND6P03923 174 aa5.89□□□□□ -1.47
NUP50-205ENST00000419387 FABP9Q0Z7S8 132 aa5.89□□□□□ -1.47
NUP50-205ENST00000419387 Q6ZUT4 128 aa5.89□□□□□ -1.47
NUP50-205ENST00000419387 TRAPPC1Q9Y5R8 145 aa5.89□□□□□ -1.47
NUP50-205ENST00000419387 APOMO95445 188 aa5.88□□□□□ -1.47
NUP50-205ENST00000419387 PTTG1IPP53801 180 aa5.88□□□□□ -1.47
NUP50-205ENST00000419387 GAGE2BQ13066 116 aa5.88□□□□□ -1.47
NUP50-205ENST00000419387 LCE5AQ5TCM9 118 aa5.88□□□□□ -1.47
NUP50-205ENST00000419387 C5orf38Q86SI9 138 aa5.88□□□□□ -1.47
NUP50-205ENST00000419387 C2orf48Q96LS8 159 aa5.88□□□□□ -1.47
NUP50-205ENST00000419387 CAMK2N2Q96S95 79 aa5.88□□□□□ -1.47
NUP50-205ENST00000419387 OPRPNQ99935 248 aaPredicted RBP5.88□□□□□ -1.47
NUP50-205ENST00000419387 MAP1LC3AQ9H492 121 aa5.88□□□□□ -1.47
NUP50-205ENST00000419387 C18orf32Q8TCD1 76 aa5.87□□□□□ -1.47
NUP50-205ENST00000419387 LINC01600Q96MT4 127 aa5.87□□□□□ -1.47
NUP50-205ENST00000419387 UBR4Q5T4S7 5183 aa5.87□□□□□ -1.47
NUP50-205ENST00000419387 TNXBP22105 4242 aa5.86□□□□□ -1.47
NUP50-205ENST00000419387 A0A096LNJ9 63 aa5.86□□□□□ -1.47
NUP50-205ENST00000419387 A0A1W2PNN7 141 aa5.86□□□□□ -1.47
NUP50-205ENST00000419387 IGIPA6NJ69 53 aa5.86□□□□□ -1.47
NUP50-205ENST00000419387 K7EMI3 77 aa5.86□□□□□ -1.47
NUP50-205ENST00000419387 SPINK6Q6UWN8 80 aa5.86□□□□□ -1.47
NUP50-205ENST00000419387 Q6ZRP5 223 aa5.86□□□□□ -1.47
NUP50-205ENST00000419387 NXT2Q9NPJ8 142 aaKnown RBP5.86□□□□□ -1.47
NUP50-205ENST00000419387 SPANXA1Q9NS26 97 aa5.86□□□□□ -1.47
NUP50-205ENST00000419387 PYGO1Q9Y3Y4 419 aa5.86□□□□□ -1.47
NUP50-205ENST00000419387 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.85□□□□□ -1.47
NUP50-205ENST00000419387 TRGC2P03986 189 aa5.85□□□□□ -1.47
NUP50-205ENST00000419387 RAB5AP20339 215 aa5.85□□□□□ -1.47
NUP50-205ENST00000419387 MRPS36P82909 103 aaKnown RBP5.85□□□□□ -1.47
NUP50-205ENST00000419387 SPAG11BQ08648 103 aa5.85□□□□□ -1.47
NUP50-205ENST00000419387 SRSF9Q13242 221 aaKnown RBP eCLIP5.85□□□□□ -1.47
NUP50-205ENST00000419387 RNF151Q2KHN1 245 aa5.85□□□□□ -1.47
NUP50-205ENST00000419387 LINC00173Q6ZV60 143 aa5.85□□□□□ -1.47
NUP50-205ENST00000419387 OR10D4PQ8NGN7 298 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms