RNA–Protein interactions for RNA: ENST00000411973.3

TRAPPC12-203, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-203ENST00000411973 FAM19A3Q7Z5A8 133 aa10.05□□□□□ -0.8
TRAPPC12-203ENST00000411973 DNAH8Q96JB1 4490 aa10.05□□□□□ -0.8
TRAPPC12-203ENST00000411973 KRTAP10-1P60331 282 aa10.04□□□□□ -0.8
TRAPPC12-203ENST00000411973 CNBPP62633 177 aaKnown RBP10.04□□□□□ -0.8
TRAPPC12-203ENST00000411973 PDZD11Q5EBL8 140 aa10.04□□□□□ -0.8
TRAPPC12-203ENST00000411973 ZC2HC1BQ5TFG8 222 aa10.04□□□□□ -0.8
TRAPPC12-203ENST00000411973 BAGE3Q86Y29 109 aa10.04□□□□□ -0.8
TRAPPC12-203ENST00000411973 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.03□□□□□ -0.8
TRAPPC12-203ENST00000411973 PMCHL1Q16048 86 aa10.03□□□□□ -0.8
TRAPPC12-203ENST00000411973 SLPIP03973 132 aa10.02□□□□□ -0.81
TRAPPC12-203ENST00000411973 MALP21145 153 aa10.02□□□□□ -0.81
TRAPPC12-203ENST00000411973 C5orf38Q86SI9 138 aa10.02□□□□□ -0.81
TRAPPC12-203ENST00000411973 RYR1P21817 5038 aa10.01□□□□□ -0.81
TRAPPC12-203ENST00000411973 CDK2AP2O75956 126 aa10.01□□□□□ -0.81
TRAPPC12-203ENST00000411973 APOMO95445 188 aa10.01□□□□□ -0.81
TRAPPC12-203ENST00000411973 SEC11AP67812 179 aa10.01□□□□□ -0.81
TRAPPC12-203ENST00000411973 COX6A2Q02221 97 aa10.01□□□□□ -0.81
TRAPPC12-203ENST00000411973 HIGD2BQ4VC39 106 aa10.01□□□□□ -0.81
TRAPPC12-203ENST00000411973 C9orf163Q8N9P6 203 aa10.01□□□□□ -0.81
TRAPPC12-203ENST00000411973 A0A087WZ39 114 aa10□□□□□ -0.81
TRAPPC12-203ENST00000411973 ATP5LO75964 103 aa10□□□□□ -0.81
TRAPPC12-203ENST00000411973 PMVKQ15126 192 aa10□□□□□ -0.81
TRAPPC12-203ENST00000411973 CST9LQ9H4G1 147 aa10□□□□□ -0.81
TRAPPC12-203ENST00000411973 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.99□□□□□ -0.81
TRAPPC12-203ENST00000411973 HSBP1O75506 76 aa9.99□□□□□ -0.81
TRAPPC12-203ENST00000411973 LINC00310P59036 64 aa9.99□□□□□ -0.81
TRAPPC12-203ENST00000411973 HERVK_113P63121 156 aa9.99□□□□□ -0.81
TRAPPC12-203ENST00000411973 LINC01561Q8N1V8 128 aa9.99□□□□□ -0.81
TRAPPC12-203ENST00000411973 IGHV3-64A0A075B6Q5 118 aa9.98□□□□□ -0.81
TRAPPC12-203ENST00000411973 ZNF561-AS1K7EIQ3 104 aa9.98□□□□□ -0.81
TRAPPC12-203ENST00000411973 HIST1H2BKO60814 126 aa9.98□□□□□ -0.81
TRAPPC12-203ENST00000411973 SERF1AO75920 110 aa9.98□□□□□ -0.81
TRAPPC12-203ENST00000411973 HIST1H2BJP06899 126 aa9.98□□□□□ -0.81
TRAPPC12-203ENST00000411973 HIST1H2BOP23527 126 aa9.98□□□□□ -0.81
TRAPPC12-203ENST00000411973 HIST1H2BBP33778 126 aa9.98□□□□□ -0.81
TRAPPC12-203ENST00000411973 HIST1H2BDP58876 126 aa9.98□□□□□ -0.81
TRAPPC12-203ENST00000411973 HIST1H2BCP62807 126 aa9.98□□□□□ -0.81
TRAPPC12-203ENST00000411973 HIST2H2BEQ16778 126 aa9.98□□□□□ -0.81
TRAPPC12-203ENST00000411973 LINC01620Q4KN68 170 aa9.98□□□□□ -0.81
TRAPPC12-203ENST00000411973 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.98□□□□□ -0.81
TRAPPC12-203ENST00000411973 OR10D4PQ8NGN7 298 aa9.98□□□□□ -0.81
TRAPPC12-203ENST00000411973 HIST1H2BHQ93079 126 aa9.98□□□□□ -0.81
TRAPPC12-203ENST00000411973 HIST1H2BNQ99877 126 aa9.98□□□□□ -0.81
TRAPPC12-203ENST00000411973 HIST1H2BMQ99879 126 aa9.98□□□□□ -0.81
TRAPPC12-203ENST00000411973 A0A0J9YXV3 536 aa9.97□□□□□ -0.81
TRAPPC12-203ENST00000411973 TINCRA0A1B0GVN0 87 aa9.97□□□□□ -0.81
TRAPPC12-203ENST00000411973 Q6ZSA8 131 aa9.97□□□□□ -0.81
TRAPPC12-203ENST00000411973 FAM19A2Q8N3H0 131 aa9.97□□□□□ -0.81
TRAPPC12-203ENST00000411973 HSPG2P98160 4391 aa9.97□□□□□ -0.81
TRAPPC12-203ENST00000411973 HERC2O95714 4834 aa9.96□□□□□ -0.81
TRAPPC12-203ENST00000411973 LINC00526Q96FQ7 95 aa9.96□□□□□ -0.82
TRAPPC12-203ENST00000411973 C2orf48Q96LS8 159 aa9.96□□□□□ -0.82
TRAPPC12-203ENST00000411973 GEMIN7Q9H840 131 aaKnown RBP9.96□□□□□ -0.82
TRAPPC12-203ENST00000411973 IGLV4-69A0A075B6H9 119 aa9.95□□□□□ -0.82
TRAPPC12-203ENST00000411973 IGLV5-45A0A087WSX0 123 aa9.95□□□□□ -0.82
TRAPPC12-203ENST00000411973 NUPR1O60356 82 aa9.95□□□□□ -0.82
TRAPPC12-203ENST00000411973 SDIM1Q6ZPB5 146 aa9.95□□□□□ -0.82
TRAPPC12-203ENST00000411973 ORAOV1Q8WV07 137 aa9.95□□□□□ -0.82
TRAPPC12-203ENST00000411973 CDKN2A-AS1Q9UH64 79 aa9.95□□□□□ -0.82
TRAPPC12-203ENST00000411973 XGP55808 180 aa9.94□□□□□ -0.82
TRAPPC12-203ENST00000411973 SPAG11BQ08648 103 aa9.94□□□□□ -0.82
TRAPPC12-203ENST00000411973 SYCNQ0VAF6 134 aa9.94□□□□□ -0.82
TRAPPC12-203ENST00000411973 IFI27L1Q96BM0 104 aa9.94□□□□□ -0.82
TRAPPC12-203ENST00000411973 FAM30AQ9NZY2 134 aa9.94□□□□□ -0.82
TRAPPC12-203ENST00000411973 F8WDY8 70 aa9.93□□□□□ -0.82
TRAPPC12-203ENST00000411973 IGLC3P0DOY3 106 aa9.93□□□□□ -0.82
TRAPPC12-203ENST00000411973 NDUFA6P56556 154 aa9.93□□□□□ -0.82
TRAPPC12-203ENST00000411973 CARD19Q96LW7 228 aa9.93□□□□□ -0.82
TRAPPC12-203ENST00000411973 TRAV12-1A0A0B4J245 112 aa9.92□□□□□ -0.82
TRAPPC12-203ENST00000411973 LEPROTL1O95214 131 aa9.92□□□□□ -0.82
TRAPPC12-203ENST00000411973 KIAA0087Q14695 138 aa9.92□□□□□ -0.82
TRAPPC12-203ENST00000411973 LINC00469Q8N7U9 141 aa9.92□□□□□ -0.82
TRAPPC12-203ENST00000411973 CAMK2N2Q96S95 79 aa9.92□□□□□ -0.82
TRAPPC12-203ENST00000411973 COA6Q5JTJ3 125 aaKnown RBP9.9□□□□□ -0.82
TRAPPC12-203ENST00000411973 Q6ZRU5 148 aa9.9□□□□□ -0.82
TRAPPC12-203ENST00000411973 PACRGQ96M98 296 aaPredicted RBP9.9□□□□□ -0.82
TRAPPC12-203ENST00000411973 CHAC1Q9BUX1 264 aa9.9□□□□□ -0.82
TRAPPC12-203ENST00000411973 SMIM1B2RUZ4 78 aa9.89□□□□□ -0.83
TRAPPC12-203ENST00000411973 CIRBPQ14011 172 aaKnown RBP9.89□□□□□ -0.83
TRAPPC12-203ENST00000411973 RNF151Q2KHN1 245 aa9.89□□□□□ -0.83
TRAPPC12-203ENST00000411973 MRPL35Q9NZE8 188 aaKnown RBP9.89□□□□□ -0.83
TRAPPC12-203ENST00000411973 HSPB8Q9UJY1 196 aa9.89□□□□□ -0.83
TRAPPC12-203ENST00000411973 PKIGQ9Y2B9 76 aa9.89□□□□□ -0.83
TRAPPC12-203ENST00000411973 FAT1Q14517 4588 aa9.89□□□□□ -0.83
TRAPPC12-203ENST00000411973 H3BRM9 83 aa9.88□□□□□ -0.83
TRAPPC12-203ENST00000411973 NDUFA1O15239 70 aa9.88□□□□□ -0.83
TRAPPC12-203ENST00000411973 Q8IZM0 81 aa9.88□□□□□ -0.83
TRAPPC12-203ENST00000411973 CHTOPQ9Y3Y2 248 aaKnown RBP9.88□□□□□ -0.83
TRAPPC12-203ENST00000411973 ZNF22P17026 224 aaPredicted RBP9.87□□□□□ -0.83
TRAPPC12-203ENST00000411973 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.87□□□□□ -0.83
TRAPPC12-203ENST00000411973 C11orf86A6NJI1 115 aa9.86□□□□□ -0.83
TRAPPC12-203ENST00000411973 F8VRH5 84 aa9.86□□□□□ -0.83
TRAPPC12-203ENST00000411973 PANO1I0J062 215 aa9.86□□□□□ -0.83
TRAPPC12-203ENST00000411973 PRSS2P07478 247 aa9.86□□□□□ -0.83
TRAPPC12-203ENST00000411973 FABP4P15090 132 aa9.86□□□□□ -0.83
TRAPPC12-203ENST00000411973 UNQ6190/PRO20217Q6UXQ8 127 aa9.86□□□□□ -0.83
TRAPPC12-203ENST00000411973 SCXQ7RTU7 201 aa9.86□□□□□ -0.83
TRAPPC12-203ENST00000411973 SPINK8P0C7L1 97 aa9.85□□□□□ -0.83
TRAPPC12-203ENST00000411973 HAMPP81172 84 aa9.85□□□□□ -0.83
TRAPPC12-203ENST00000411973 ODF1Q14990 250 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 208.9 ms