RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 TMEM256-PLSCR3K7ERE1 68 aa-2.96□□□□□ -2.88
RNU4-88P-201ENST00000411220 ZNF593O00488 134 aaPredicted RBP-2.96□□□□□ -2.88
RNU4-88P-201ENST00000411220 SPAG6O75602 509 aa-2.96□□□□□ -2.88
RNU4-88P-201ENST00000411220 SCGNO76038 276 aa-2.96□□□□□ -2.88
RNU4-88P-201ENST00000411220 HBDP02042 147 aa-2.96□□□□□ -2.88
RNU4-88P-201ENST00000411220 RPL12P30050 165 aaKnown RBP-2.96□□□□□ -2.88
RNU4-88P-201ENST00000411220 RAB10P61026 200 aa-2.96□□□□□ -2.88
RNU4-88P-201ENST00000411220 MRPS25P82663 173 aaKnown RBP-2.96□□□□□ -2.88
RNU4-88P-201ENST00000411220 HPCAP84074 193 aa-2.96□□□□□ -2.88
RNU4-88P-201ENST00000411220 TAF7Q15545 349 aaPredicted RBP-2.96□□□□□ -2.88
RNU4-88P-201ENST00000411220 CCDC58Q4VC31 144 aa-2.96□□□□□ -2.88
RNU4-88P-201ENST00000411220 HSP90AB4PQ58FF6 505 aa-2.96□□□□□ -2.88
RNU4-88P-201ENST00000411220 SDHAF2Q9NX18 166 aa-2.96□□□□□ -2.88
RNU4-88P-201ENST00000411220 C6orf48Q9UBA6 75 aa-2.96□□□□□ -2.88
RNU4-88P-201ENST00000411220 MRPS7Q9Y2R9 242 aaKnown RBP-2.96□□□□□ -2.88
RNU4-88P-201ENST00000411220 SBDSQ9Y3A5 250 aaKnown RBP eCLIP-2.96□□□□□ -2.88
RNU4-88P-201ENST00000411220 OVOS2A0A0G2JMS6 1433 aa-2.96□□□□□ -2.88
RNU4-88P-201ENST00000411220 SAMD9Q5K651 1589 aa-2.96□□□□□ -2.88
RNU4-88P-201ENST00000411220 ANKRD36BQ8N2N9 1353 aa-2.97□□□□□ -2.88
RNU4-88P-201ENST00000411220 LOC285095A0A1B0GVY8 99 aa-2.97□□□□□ -2.88
RNU4-88P-201ENST00000411220 A0A1B0GWA3 101 aa-2.97□□□□□ -2.88
RNU4-88P-201ENST00000411220 H3BMG7 143 aa-2.97□□□□□ -2.88
RNU4-88P-201ENST00000411220 H3BQF6 201 aa-2.97□□□□□ -2.88
RNU4-88P-201ENST00000411220 ENSAO43768 121 aaKnown RBP-2.97□□□□□ -2.88
RNU4-88P-201ENST00000411220 HIST1H2BKO60814 126 aa-2.97□□□□□ -2.88
RNU4-88P-201ENST00000411220 SNCGO76070 127 aa-2.97□□□□□ -2.88
RNU4-88P-201ENST00000411220 HIST1H2BJP06899 126 aa-2.97□□□□□ -2.88
RNU4-88P-201ENST00000411220 MYL3P08590 195 aa-2.97□□□□□ -2.88
RNU4-88P-201ENST00000411220 TPT1P13693 172 aaKnown RBP-2.97□□□□□ -2.88
RNU4-88P-201ENST00000411220 CCL1P22362 96 aa-2.97□□□□□ -2.88
RNU4-88P-201ENST00000411220 CFL1P23528 166 aaKnown RBP-2.97□□□□□ -2.88
RNU4-88P-201ENST00000411220 NFYBP25208 207 aa-2.97□□□□□ -2.88
RNU4-88P-201ENST00000411220 LCN2P80188 198 aa-2.97□□□□□ -2.88
RNU4-88P-201ENST00000411220 LINC01556Q5JQF7 62 aa-2.97□□□□□ -2.88
RNU4-88P-201ENST00000411220 BLOC1S2Q6QNY1 142 aa-2.97□□□□□ -2.88
RNU4-88P-201ENST00000411220 OR5H6Q8NGV6 325 aa-2.97□□□□□ -2.88
RNU4-88P-201ENST00000411220 MRFAP1L1Q96HT8 127 aa-2.97□□□□□ -2.88
RNU4-88P-201ENST00000411220 MCEEQ96PE7 176 aa-2.97□□□□□ -2.88
RNU4-88P-201ENST00000411220 MYCBPQ99417 103 aaPredicted RBP-2.97□□□□□ -2.88
RNU4-88P-201ENST00000411220 TREX2Q9BQ50 279 aaPredicted RBP-2.97□□□□□ -2.88
RNU4-88P-201ENST00000411220 MED10Q9BTT4 135 aa-2.97□□□□□ -2.88
RNU4-88P-201ENST00000411220 DRC3Q9H069 523 aa-2.97□□□□□ -2.88
RNU4-88P-201ENST00000411220 TMEM191AQ9H0A3 160 aa-2.97□□□□□ -2.88
RNU4-88P-201ENST00000411220 FAM96AQ9H5X1 160 aa-2.97□□□□□ -2.88
RNU4-88P-201ENST00000411220 RAB18Q9NP72 206 aa-2.97□□□□□ -2.88
RNU4-88P-201ENST00000411220 DYNLRB1Q9NP97 96 aa-2.97□□□□□ -2.88
RNU4-88P-201ENST00000411220 CFDP1Q9UEE9 299 aaPredicted RBP-2.97□□□□□ -2.88
RNU4-88P-201ENST00000411220 RABAC1Q9UI14 185 aa-2.97□□□□□ -2.88
RNU4-88P-201ENST00000411220 CC2D2AQ9P2K1 1620 aa-2.97□□□□□ -2.89
RNU4-88P-201ENST00000411220 CFAP43Q8NDM7 1665 aa-2.98□□□□□ -2.89
RNU4-88P-201ENST00000411220 FAM240BA0A1B0GVZ2 78 aa-2.98□□□□□ -2.89
RNU4-88P-201ENST00000411220 TMEM218A2RU14 115 aa-2.98□□□□□ -2.89
RNU4-88P-201ENST00000411220 KRT87PA6NCN2 255 aa-2.98□□□□□ -2.89
RNU4-88P-201ENST00000411220 DISC1C4P0D8 188 aa-2.98□□□□□ -2.89
RNU4-88P-201ENST00000411220 SCGB1D2O95969 90 aa-2.98□□□□□ -2.89
RNU4-88P-201ENST00000411220 TTRP02766 147 aa-2.98□□□□□ -2.89
RNU4-88P-201ENST00000411220 CKS2P33552 79 aa-2.98□□□□□ -2.89
RNU4-88P-201ENST00000411220 ARPP19P56211 112 aa-2.98□□□□□ -2.89
RNU4-88P-201ENST00000411220 UBE2KP61086 200 aa-2.98□□□□□ -2.89
RNU4-88P-201ENST00000411220 C10orf128Q5T292 105 aa-2.98□□□□□ -2.89
RNU4-88P-201ENST00000411220 MIC13Q5XKP0 118 aa-2.98□□□□□ -2.89
RNU4-88P-201ENST00000411220 MRPL54Q6P161 138 aaKnown RBP-2.98□□□□□ -2.89
RNU4-88P-201ENST00000411220 OTOSQ8NHW6 89 aa-2.98□□□□□ -2.89
RNU4-88P-201ENST00000411220 TSGA13Q96PP4 275 aa-2.98□□□□□ -2.89
RNU4-88P-201ENST00000411220 ARMC7Q9H6L4 198 aa-2.98□□□□□ -2.89
RNU4-88P-201ENST00000411220 OLA1Q9NTK5 396 aaKnown RBP-2.98□□□□□ -2.89
RNU4-88P-201ENST00000411220 PARVAQ9NVD7 372 aa-2.98□□□□□ -2.89
RNU4-88P-201ENST00000411220 PRNDQ9UKY0 176 aa-2.98□□□□□ -2.89
RNU4-88P-201ENST00000411220 ZNF518AQ6AHZ1 1483 aa-2.98□□□□□ -2.89
RNU4-88P-201ENST00000411220 DDX60LQ5H9U9 1706 aaKnown RBP-2.99□□□□□ -2.89
RNU4-88P-201ENST00000411220 TRBV19A0A075B6N1 114 aa-2.99□□□□□ -2.89
RNU4-88P-201ENST00000411220 LINC00614P0C842 121 aa-2.99□□□□□ -2.89
RNU4-88P-201ENST00000411220 TCL1AP56279 114 aa-2.99□□□□□ -2.89
RNU4-88P-201ENST00000411220 CCL8P80075 99 aa-2.99□□□□□ -2.89
RNU4-88P-201ENST00000411220 ARF5P84085 180 aa-2.99□□□□□ -2.89
RNU4-88P-201ENST00000411220 SETQ01105 290 aaPredicted RBP-2.99□□□□□ -2.89
RNU4-88P-201ENST00000411220 TMED2Q15363 201 aa-2.99□□□□□ -2.89
RNU4-88P-201ENST00000411220 PPP1R42Q7Z4L9 355 aa-2.99□□□□□ -2.89
RNU4-88P-201ENST00000411220 DEFB107AQ8IZN7 70 aa-2.99□□□□□ -2.89
RNU4-88P-201ENST00000411220 THEM6Q8WUY1 208 aa-2.99□□□□□ -2.89
RNU4-88P-201ENST00000411220 DKKL1Q9UK85 242 aa-2.99□□□□□ -2.89
RNU4-88P-201ENST00000411220 ODF2LQ9ULJ1 636 aa-2.99□□□□□ -2.89
RNU4-88P-201ENST00000411220 C5P01031 1676 aa-2.99□□□□□ -2.89
RNU4-88P-201ENST00000411220 OVOS2A0A0J9YW53 1432 aa-3□□□□□ -2.89
RNU4-88P-201ENST00000411220 OVOS2Q6IE36 1432 aa-3□□□□□ -2.89
RNU4-88P-201ENST00000411220 RRBP1Q9P2E9 1410 aaKnown RBP-3□□□□□ -2.89
RNU4-88P-201ENST00000411220 A0A0U1RQV5 110 aa-3□□□□□ -2.89
RNU4-88P-201ENST00000411220 A6NIN4 97 aa-3□□□□□ -2.89
RNU4-88P-201ENST00000411220 ATG12O94817 140 aa-3□□□□□ -2.89
RNU4-88P-201ENST00000411220 RBP4P02753 201 aa-3□□□□□ -2.89
RNU4-88P-201ENST00000411220 TRGC2P03986 189 aa-3□□□□□ -2.89
RNU4-88P-201ENST00000411220 SMIM10L2AP0DMW4 78 aa-3□□□□□ -2.89
RNU4-88P-201ENST00000411220 SMIM10L2BP0DMW5 78 aa-3□□□□□ -2.89
RNU4-88P-201ENST00000411220 CXCL2P19875 107 aa-3□□□□□ -2.89
RNU4-88P-201ENST00000411220 ATP6V1C1P21283 382 aa-3□□□□□ -2.89
RNU4-88P-201ENST00000411220 HSD11B1P28845 292 aa-3□□□□□ -2.89
RNU4-88P-201ENST00000411220 RPA3P35244 121 aaPredicted RBP-3□□□□□ -2.89
RNU4-88P-201ENST00000411220 TNNT2P45379 298 aaPredicted RBP-3□□□□□ -2.89
RNU4-88P-201ENST00000411220 BLVRAP53004 296 aa-3□□□□□ -2.89
RNU4-88P-201ENST00000411220 YWHAEP62258 255 aaKnown RBP-3□□□□□ -2.89
Retrieved 100 of 20,778 RNA–protein pairs in 194 ms