RNA–Protein interactions for RNA: ENST00000409954.6

MCF2L-210, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-210ENST00000409954 IGHV3OR16-9A0A0B4J2B5 98 aa8.99□□□□□ -0.97
MCF2L-210ENST00000409954 D6R8Y8 96 aa8.99□□□□□ -0.97
MCF2L-210ENST00000409954 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.99□□□□□ -0.97
MCF2L-210ENST00000409954 RAB5AP20339 215 aa8.99□□□□□ -0.97
MCF2L-210ENST00000409954 RPL39P62891 51 aaKnown RBP8.99□□□□□ -0.97
MCF2L-210ENST00000409954 SPAG11BQ08648 103 aa8.99□□□□□ -0.97
MCF2L-210ENST00000409954 C9orf116Q5BN46 136 aaPredicted RBP8.99□□□□□ -0.97
MCF2L-210ENST00000409954 MRPL54Q6P161 138 aaKnown RBP8.99□□□□□ -0.97
MCF2L-210ENST00000409954 MRPL35Q9NZE8 188 aaKnown RBP8.99□□□□□ -0.97
MCF2L-210ENST00000409954 A0A1B0GXF2 115 aa8.98□□□□□ -0.97
MCF2L-210ENST00000409954 ATP5L2Q7Z4Y8 100 aa8.98□□□□□ -0.97
MCF2L-210ENST00000409954 A0A1B0GVG6 124 aa8.97□□□□□ -0.97
MCF2L-210ENST00000409954 TMEM136Q6ZRR5 245 aa8.97□□□□□ -0.97
MCF2L-210ENST00000409954 ORMDL3Q8N138 153 aa8.97□□□□□ -0.97
MCF2L-210ENST00000409954 ORAOV1Q8WV07 137 aa8.97□□□□□ -0.97
MCF2L-210ENST00000409954 FAM104AQ969W3 186 aa8.97□□□□□ -0.97
MCF2L-210ENST00000409954 OPRPNQ99935 248 aaPredicted RBP8.97□□□□□ -0.97
MCF2L-210ENST00000409954 PYGO1Q9Y3Y4 419 aa8.97□□□□□ -0.97
MCF2L-210ENST00000409954 PRSS47A8MTI9 375 aa8.96□□□□□ -0.98
MCF2L-210ENST00000409954 NPYP01303 97 aa8.96□□□□□ -0.98
MCF2L-210ENST00000409954 RPL18AQ02543 176 aaKnown RBP8.96□□□□□ -0.98
MCF2L-210ENST00000409954 IFITM10A6NMD0 228 aa8.95□□□□□ -0.98
MCF2L-210ENST00000409954 NDUFA1O15239 70 aa8.95□□□□□ -0.98
MCF2L-210ENST00000409954 MT-ND6P03923 174 aa8.95□□□□□ -0.98
MCF2L-210ENST00000409954 IFI27P40305 119 aaPredicted RBP8.95□□□□□ -0.98
MCF2L-210ENST00000409954 PRELID3AQ96N28 172 aa8.95□□□□□ -0.98
MCF2L-210ENST00000409954 LAMTOR2Q9Y2Q5 125 aa8.95□□□□□ -0.98
MCF2L-210ENST00000409954 TGIF2-C20orf24A0A0A6YYL0 155 aa8.94□□□□□ -0.98
MCF2L-210ENST00000409954 TLX1NBP0CAT3 122 aa8.94□□□□□ -0.98
MCF2L-210ENST00000409954 PSORS1C2Q9UIG4 136 aa8.94□□□□□ -0.98
MCF2L-210ENST00000409954 UBR4Q5T4S7 5183 aa8.94□□□□□ -0.98
MCF2L-210ENST00000409954 A0A087WZ39 114 aa8.93□□□□□ -0.98
MCF2L-210ENST00000409954 PNRC1Q12796 327 aaPredicted RBP8.92□□□□□ -0.98
MCF2L-210ENST00000409954 UNQ6190/PRO20217Q6UXQ8 127 aa8.92□□□□□ -0.98
MCF2L-210ENST00000409954 LINC01561Q8N1V8 128 aa8.92□□□□□ -0.98
MCF2L-210ENST00000409954 ANAPC16Q96DE5 110 aa8.92□□□□□ -0.98
MCF2L-210ENST00000409954 C1orf137Q5JT78 98 aa8.91□□□□□ -0.98
MCF2L-210ENST00000409954 PHF5AQ7RTV0 110 aaKnown RBP8.91□□□□□ -0.98
MCF2L-210ENST00000409954 TMEM141Q96I45 108 aa8.91□□□□□ -0.98
MCF2L-210ENST00000409954 MT-ND4LP03901 98 aa8.9□□□□□ -0.98
MCF2L-210ENST00000409954 KIAA0087Q14695 138 aa8.9□□□□□ -0.98
MCF2L-210ENST00000409954 LINC00242Q5T6M2 205 aa8.9□□□□□ -0.98
MCF2L-210ENST00000409954 C10orf25Q5T742 122 aa8.9□□□□□ -0.98
MCF2L-210ENST00000409954 MAP1LC3AQ9H492 121 aa8.9□□□□□ -0.98
MCF2L-210ENST00000409954 TNXBP22105 4242 aa8.89□□□□□ -0.99
MCF2L-210ENST00000409954 IGLV4-3A0A075B6K6 122 aa8.89□□□□□ -0.99
MCF2L-210ENST00000409954 TRBV30A0A0K0K1B3 111 aa8.89□□□□□ -0.99
MCF2L-210ENST00000409954 LOC389332A0A1B0GUA5 103 aa8.89□□□□□ -0.99
MCF2L-210ENST00000409954 K7EMI3 77 aa8.89□□□□□ -0.99
MCF2L-210ENST00000409954 NPSP0C0P6 89 aa8.89□□□□□ -0.99
MCF2L-210ENST00000409954 TEX43Q6ZNM6 134 aa8.89□□□□□ -0.99
MCF2L-210ENST00000409954 C6orf48Q9UBA6 75 aa8.89□□□□□ -0.99
MCF2L-210ENST00000409954 CYSLTR1Q9Y271 337 aa8.89□□□□□ -0.99
MCF2L-210ENST00000409954 IGLV7-43P04211 117 aa8.88□□□□□ -0.99
MCF2L-210ENST00000409954 G0S2P27469 103 aa8.88□□□□□ -0.99
MCF2L-210ENST00000409954 ORMDL2Q53FV1 153 aa8.88□□□□□ -0.99
MCF2L-210ENST00000409954 Q6ZN92 141 aa8.88□□□□□ -0.99
MCF2L-210ENST00000409954 Q8N8P6 123 aa8.88□□□□□ -0.99
MCF2L-210ENST00000409954 DIRC1Q969H9 104 aa8.88□□□□□ -0.99
MCF2L-210ENST00000409954 PACRGQ96M98 296 aaPredicted RBP8.88□□□□□ -0.99
MCF2L-210ENST00000409954 C2orf88Q9BSF0 95 aa8.88□□□□□ -0.99
MCF2L-210ENST00000409954 VCX2Q9H322 139 aa8.88□□□□□ -0.99
MCF2L-210ENST00000409954 UBE2D1P51668 147 aa8.87□□□□□ -0.99
MCF2L-210ENST00000409954 RAB14P61106 215 aa8.87□□□□□ -0.99
MCF2L-210ENST00000409954 GAGE2EQ4V326 116 aa8.87□□□□□ -0.99
MCF2L-210ENST00000409954 GAGE2DQ9UEU5 116 aa8.87□□□□□ -0.99
MCF2L-210ENST00000409954 NDUFC2-KCTD14E9PQ53 114 aa8.86□□□□□ -0.99
MCF2L-210ENST00000409954 C2orf66Q6UXQ4 117 aa8.86□□□□□ -0.99
MCF2L-210ENST00000409954 PAPPA-AS1Q5QFB9 102 aa8.85□□□□□ -0.99
MCF2L-210ENST00000409954 AMELXQ99217 191 aa8.85□□□□□ -0.99
MCF2L-210ENST00000409954 NXT2Q9NPJ8 142 aaKnown RBP8.85□□□□□ -0.99
MCF2L-210ENST00000409954 FAM168BA1KXE4 195 aa8.84□□□□□ -0.99
MCF2L-210ENST00000409954 PRSS2P07478 247 aa8.84□□□□□ -0.99
MCF2L-210ENST00000409954 SEC11AP67812 179 aa8.84□□□□□ -0.99
MCF2L-210ENST00000409954 ODF1Q14990 250 aa8.84□□□□□ -0.99
MCF2L-210ENST00000409954 C6orf226Q5I0X4 101 aa8.84□□□□□ -0.99
MCF2L-210ENST00000409954 FAM19A3Q7Z5A8 133 aa8.84□□□□□ -0.99
MCF2L-210ENST00000409954 IGIPA6NJ69 53 aa8.83□□□□□ -1
MCF2L-210ENST00000409954 CKS1BP61024 79 aa8.83□□□□□ -1
MCF2L-210ENST00000409954 C2orf82Q6UX34 121 aa8.83□□□□□ -1
MCF2L-210ENST00000409954 FAM19A5Q7Z5A7 132 aaPredicted RBP8.83□□□□□ -1
MCF2L-210ENST00000409954 CTDSP1Q9GZU7 261 aa8.83□□□□□ -1
MCF2L-210ENST00000409954 UBE2BP63146 152 aa8.82□□□□□ -1
MCF2L-210ENST00000409954 H0Y9J4 135 aa8.81□□□□□ -1
MCF2L-210ENST00000409954 M0QXV9 152 aa8.81□□□□□ -1
MCF2L-210ENST00000409954 HERVK_113P63121 156 aa8.81□□□□□ -1
MCF2L-210ENST00000409954 Q8IZM0 81 aa8.81□□□□□ -1
MCF2L-210ENST00000409954 IGLV1-50A0A075B6I6 118 aa8.8□□□□□ -1
MCF2L-210ENST00000409954 ZC2HC1BQ5TFG8 222 aa8.8□□□□□ -1
MCF2L-210ENST00000409954 LINC00173Q6ZV60 143 aa8.8□□□□□ -1
MCF2L-210ENST00000409954 KRTAP11-1Q8IUC1 163 aa8.8□□□□□ -1
MCF2L-210ENST00000409954 KRTAP7-1Q8IUC3 87 aa8.8□□□□□ -1
MCF2L-210ENST00000409954 ALKBH7Q9BT30 221 aaPredicted RBP8.8□□□□□ -1
MCF2L-210ENST00000409954 TOMM7Q9P0U1 55 aa8.8□□□□□ -1
MCF2L-210ENST00000409954 LINC01549A6NIU2 74 aa8.79□□□□□ -1
MCF2L-210ENST00000409954 C9orf129Q5T035 196 aaKnown RBP8.79□□□□□ -1
MCF2L-210ENST00000409954 PRR26Q8N8Z3 221 aa8.79□□□□□ -1
MCF2L-210ENST00000409954 TIMM17AQ99595 171 aa8.79□□□□□ -1
MCF2L-210ENST00000409954 LBHQ53QV2 105 aaPredicted RBP8.78□□□□□ -1
MCF2L-210ENST00000409954 TOMM6Q96B49 74 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms