RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 LINC01620Q4KN68 170 aa10.84□□□□□ -0.67
SCAMP4-202ENST00000409472 TRBV10-2A0A0K0K1G8 114 aa10.83□□□□□ -0.68
SCAMP4-202ENST00000409472 TRAV8-3A0A0A6YYJ7 113 aa10.83□□□□□ -0.68
SCAMP4-202ENST00000409472 TEX49A0A1B0GTD5 131 aa10.83□□□□□ -0.68
SCAMP4-202ENST00000409472 SMIM9A6NGZ8 99 aa10.83□□□□□ -0.68
SCAMP4-202ENST00000409472 J3KT08 172 aa10.83□□□□□ -0.68
SCAMP4-202ENST00000409472 WIPF1O43516 503 aa10.83□□□□□ -0.68
SCAMP4-202ENST00000409472 LINC00482Q8N8I6 264 aa10.83□□□□□ -0.68
SCAMP4-202ENST00000409472 SLC25A29Q8N8R3 303 aa10.83□□□□□ -0.68
SCAMP4-202ENST00000409472 TMEM101Q96IK0 257 aa10.83□□□□□ -0.68
SCAMP4-202ENST00000409472 LINC00694P0DN24 101 aa10.82□□□□□ -0.68
SCAMP4-202ENST00000409472 A8MZ25 164 aa10.82□□□□□ -0.68
SCAMP4-202ENST00000409472 PF4P02776 101 aa10.82□□□□□ -0.68
SCAMP4-202ENST00000409472 C9orf153Q5TBE3 101 aa10.82□□□□□ -0.68
SCAMP4-202ENST00000409472 LOC100131303A0A0U1RQF7 123 aa10.81□□□□□ -0.68
SCAMP4-202ENST00000409472 K7EQD1 137 aa10.81□□□□□ -0.68
SCAMP4-202ENST00000409472 LGALS3P17931 250 aaKnown RBP10.81□□□□□ -0.68
SCAMP4-202ENST00000409472 A0A0B4J2C4 111 aa10.81□□□□□ -0.68
SCAMP4-202ENST00000409472 IGHV3-33P01772 117 aa10.81□□□□□ -0.68
SCAMP4-202ENST00000409472 MRPS36P82909 103 aaKnown RBP10.81□□□□□ -0.68
SCAMP4-202ENST00000409472 NTM-AS1Q6ZSK4 140 aa10.81□□□□□ -0.68
SCAMP4-202ENST00000409472 IMUPQ9GZP8 106 aa10.81□□□□□ -0.68
SCAMP4-202ENST00000409472 A0A1B0GX51 115 aa10.8□□□□□ -0.68
SCAMP4-202ENST00000409472 LEPROTO15243 131 aa10.8□□□□□ -0.68
SCAMP4-202ENST00000409472 C3orf56Q8N813 242 aa10.8□□□□□ -0.68
SCAMP4-202ENST00000409472 Q1RN00 199 aa10.79□□□□□ -0.68
SCAMP4-202ENST00000409472 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.79□□□□□ -0.68
SCAMP4-202ENST00000409472 TEP1Q99973 2627 aaKnown RBP10.79□□□□□ -0.68
SCAMP4-202ENST00000409472 IGHV3-30-3P0DP02 117 aa10.79□□□□□ -0.68
SCAMP4-202ENST00000409472 DAZ2Q13117 558 aaKnown RBP10.79□□□□□ -0.68
SCAMP4-202ENST00000409472 C3orf22Q8N5N4 141 aa10.79□□□□□ -0.68
SCAMP4-202ENST00000409472 C16orf74Q96GX8 76 aa10.79□□□□□ -0.68
SCAMP4-202ENST00000409472 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.78□□□□□ -0.68
SCAMP4-202ENST00000409472 UQCRQO14949 82 aa10.78□□□□□ -0.68
SCAMP4-202ENST00000409472 OR13C6PQ8NH95 151 aa10.78□□□□□ -0.68
SCAMP4-202ENST00000409472 TRGV2A0A075B6R0 118 aa10.77□□□□□ -0.68
SCAMP4-202ENST00000409472 A4D1N5 150 aa10.77□□□□□ -0.68
SCAMP4-202ENST00000409472 H3BT86 120 aa10.77□□□□□ -0.68
SCAMP4-202ENST00000409472 C2orf82Q6UX34 121 aa10.77□□□□□ -0.68
SCAMP4-202ENST00000409472 TIMM21Q9BVV7 248 aa10.77□□□□□ -0.69
SCAMP4-202ENST00000409472 FAM236AA0A1B0GUQ0 79 aa10.76□□□□□ -0.69
SCAMP4-202ENST00000409472 FAM236BA0A1B0GV22 79 aa10.76□□□□□ -0.69
SCAMP4-202ENST00000409472 ATP5G1P05496 136 aa10.76□□□□□ -0.69
SCAMP4-202ENST00000409472 CMC4P56277 68 aaPredicted RBP10.76□□□□□ -0.69
SCAMP4-202ENST00000409472 EIF4EBP3O60516 100 aaPredicted RBP10.76□□□□□ -0.69
SCAMP4-202ENST00000409472 RPL36AP83881 106 aaKnown RBP10.76□□□□□ -0.69
SCAMP4-202ENST00000409472 RPL36ALQ969Q0 106 aaKnown RBP10.76□□□□□ -0.69
SCAMP4-202ENST00000409472 TRBV30A0A0K0K1B3 111 aa10.75□□□□□ -0.69
SCAMP4-202ENST00000409472 H7C2G1 150 aa10.75□□□□□ -0.69
SCAMP4-202ENST00000409472 TINCRA0A1B0GVN0 87 aa10.75□□□□□ -0.69
SCAMP4-202ENST00000409472 HERVK_113P63121 156 aa10.75□□□□□ -0.69
SCAMP4-202ENST00000409472 COX6A2Q02221 97 aa10.75□□□□□ -0.69
SCAMP4-202ENST00000409472 FAM19A5Q7Z5A7 132 aaPredicted RBP10.75□□□□□ -0.69
SCAMP4-202ENST00000409472 CDKN2A-AS1Q9UH64 79 aa10.75□□□□□ -0.69
SCAMP4-202ENST00000409472 TRBV10-1A0A0K0K1A3 114 aa10.74□□□□□ -0.69
SCAMP4-202ENST00000409472 RPS28P62857 69 aaKnown RBP10.74□□□□□ -0.69
SCAMP4-202ENST00000409472 LINC00526Q96FQ7 95 aa10.74□□□□□ -0.69
SCAMP4-202ENST00000409472 A0A0J9YXY3 114 aa10.74□□□□□ -0.69
SCAMP4-202ENST00000409472 LOC107984640A0A0U1RRK4 108 aa10.74□□□□□ -0.69
SCAMP4-202ENST00000409472 ACYP1P07311 99 aa10.74□□□□□ -0.69
SCAMP4-202ENST00000409472 DEFB121Q5J5C9 76 aa10.73□□□□□ -0.69
SCAMP4-202ENST00000409472 IGHV1-58A0A0C4DH39 117 aa10.73□□□□□ -0.69
SCAMP4-202ENST00000409472 DGAT2L7PQ6IED9 249 aa10.73□□□□□ -0.69
SCAMP4-202ENST00000409472 OVOL2Q9BRP0 275 aa10.73□□□□□ -0.69
SCAMP4-202ENST00000409472 MAST4O15021 2626 aa10.72□□□□□ -0.69
SCAMP4-202ENST00000409472 VSIG2Q96IQ7 327 aa10.72□□□□□ -0.69
SCAMP4-202ENST00000409472 LITAFQ99732 161 aa10.72□□□□□ -0.69
SCAMP4-202ENST00000409472 CYSRT1A8MQ03 144 aa10.72□□□□□ -0.69
SCAMP4-202ENST00000409472 COX6CP09669 75 aa10.72□□□□□ -0.69
SCAMP4-202ENST00000409472 DAZ4Q86SG3 579 aaKnown RBP10.72□□□□□ -0.69
SCAMP4-202ENST00000409472 DAZ3Q9NR90 486 aaKnown RBP10.72□□□□□ -0.69
SCAMP4-202ENST00000409472 DEFB130BP0DP73 79 aa10.71□□□□□ -0.69
SCAMP4-202ENST00000409472 DEFB130AP0DP74 79 aa10.71□□□□□ -0.69
SCAMP4-202ENST00000409472 LINC00242Q5T6M2 205 aa10.71□□□□□ -0.69
SCAMP4-202ENST00000409472 TRGV4A0A0C4DH28 118 aa10.7□□□□□ -0.7
SCAMP4-202ENST00000409472 H7C423 109 aa10.7□□□□□ -0.7
SCAMP4-202ENST00000409472 FHL2Q14192 279 aa10.7□□□□□ -0.7
SCAMP4-202ENST00000409472 ADAMTSL4-AS1Q5T5F5 129 aa10.7□□□□□ -0.7
SCAMP4-202ENST00000409472 TRAV13-1A0A0B4J241 112 aa10.7□□□□□ -0.7
SCAMP4-202ENST00000409472 MUSTN1Q8IVN3 82 aa10.7□□□□□ -0.7
SCAMP4-202ENST00000409472 NDUFA12Q9UI09 145 aa10.7□□□□□ -0.7
SCAMP4-202ENST00000409472 TRIAP1O43715 76 aa10.69□□□□□ -0.7
SCAMP4-202ENST00000409472 X6R8D5 127 aa10.69□□□□□ -0.7
SCAMP4-202ENST00000409472 F8P00451 2351 aa10.69□□□□□ -0.7
SCAMP4-202ENST00000409472 IGLV5-45A0A087WSX0 123 aa10.68□□□□□ -0.7
SCAMP4-202ENST00000409472 NPC2P61916 151 aa10.68□□□□□ -0.7
SCAMP4-202ENST00000409472 TRBV6-4A0A1B0GX49 114 aa10.68□□□□□ -0.7
SCAMP4-202ENST00000409472 CDC42SE2Q9NRR3 84 aa10.68□□□□□ -0.7
SCAMP4-202ENST00000409472 DEFB4AO15263 64 aa10.67□□□□□ -0.7
SCAMP4-202ENST00000409472 GAGE2AQ6NT46 116 aa10.67□□□□□ -0.7
SCAMP4-202ENST00000409472 LINC00643Q86TS7 51 aa10.67□□□□□ -0.7
SCAMP4-202ENST00000409472 DAND5Q8N907 189 aa10.67□□□□□ -0.7
SCAMP4-202ENST00000409472 ICOSQ9Y6W8 199 aa10.67□□□□□ -0.7
SCAMP4-202ENST00000409472 COX7CP15954 63 aa10.66□□□□□ -0.7
SCAMP4-202ENST00000409472 TMEM243Q9BU79 118 aa10.66□□□□□ -0.7
SCAMP4-202ENST00000409472 TIRAPP58753 221 aa10.66□□□□□ -0.7
SCAMP4-202ENST00000409472 CRYGAP11844 174 aa10.65□□□□□ -0.7
SCAMP4-202ENST00000409472 DEFB135Q30KP9 77 aa10.65□□□□□ -0.7
SCAMP4-202ENST00000409472 CXCL5P42830 114 aa10.65□□□□□ -0.71
SCAMP4-202ENST00000409472 C9orf66Q5T8R8 295 aa10.65□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 211.5 ms