RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 MUSTN1Q8IVN3 82 aa6.5□□□□□ -1.37
LIG4-202ENST00000405925 CR1P17927 2039 aa6.5□□□□□ -1.37
LIG4-202ENST00000405925 GAGE2BQ13066 116 aa6.5□□□□□ -1.37
LIG4-202ENST00000405925 MIR7-3HGQ8N6C7 128 aa6.5□□□□□ -1.37
LIG4-202ENST00000405925 UBE2D4Q9Y2X8 147 aa6.5□□□□□ -1.37
LIG4-202ENST00000405925 TRAV13-2A0A0B4J235 113 aa6.5□□□□□ -1.37
LIG4-202ENST00000405925 C9JAW5 83 aa6.5□□□□□ -1.37
LIG4-202ENST00000405925 UBE2BP63146 152 aa6.5□□□□□ -1.37
LIG4-202ENST00000405925 MTURNQ8N3F0 131 aa6.5□□□□□ -1.37
LIG4-202ENST00000405925 WFDC9Q8NEX5 89 aa6.5□□□□□ -1.37
LIG4-202ENST00000405925 IFITM1P13164 125 aa6.49□□□□□ -1.37
LIG4-202ENST00000405925 CXCL5P42830 114 aa6.49□□□□□ -1.37
LIG4-202ENST00000405925 TP73-AS1Q9UF72 201 aa6.49□□□□□ -1.37
LIG4-202ENST00000405925 LAMTOR3Q9UHA4 124 aa6.49□□□□□ -1.37
LIG4-202ENST00000405925 FXYD2P54710 66 aa6.49□□□□□ -1.37
LIG4-202ENST00000405925 C2orf82Q6UX34 121 aa6.49□□□□□ -1.37
LIG4-202ENST00000405925 OVOL2Q9BRP0 275 aa6.49□□□□□ -1.37
LIG4-202ENST00000405925 KRTAP10-3P60369 221 aa6.49□□□□□ -1.37
LIG4-202ENST00000405925 IGKV2D-26A0A0A0MRZ7 120 aa6.48□□□□□ -1.37
LIG4-202ENST00000405925 Q6ZVH6 145 aa6.48□□□□□ -1.37
LIG4-202ENST00000405925 KIF25-AS1Q9Y6Z4 181 aa6.48□□□□□ -1.37
LIG4-202ENST00000405925 C9orf118A6NHY6 69 aa6.48□□□□□ -1.37
LIG4-202ENST00000405925 UTP20O75691 2785 aaKnown RBP6.47□□□□□ -1.37
LIG4-202ENST00000405925 A8MZ25 164 aa6.47□□□□□ -1.37
LIG4-202ENST00000405925 DLEU1O43261 78 aa6.47□□□□□ -1.37
LIG4-202ENST00000405925 CELA1Q9UNI1 258 aa6.47□□□□□ -1.37
LIG4-202ENST00000405925 LECT2O14960 151 aa6.47□□□□□ -1.37
LIG4-202ENST00000405925 CFC1BP0CG36 223 aa6.47□□□□□ -1.37
LIG4-202ENST00000405925 CFC1P0CG37 223 aa6.47□□□□□ -1.37
LIG4-202ENST00000405925 LINC00526Q96FQ7 95 aa6.47□□□□□ -1.37
LIG4-202ENST00000405925 IGIPA6NJ69 53 aa6.47□□□□□ -1.37
LIG4-202ENST00000405925 M0R2N4 97 aa6.47□□□□□ -1.37
LIG4-202ENST00000405925 LINC00694P0DN24 101 aa6.47□□□□□ -1.37
LIG4-202ENST00000405925 HIGD1BQ9P298 99 aa6.47□□□□□ -1.37
LIG4-202ENST00000405925 LINC00959A0A1B0GUT2 108 aa6.46□□□□□ -1.37
LIG4-202ENST00000405925 TSPAN13O95857 204 aa6.46□□□□□ -1.37
LIG4-202ENST00000405925 TIRAPP58753 221 aa6.46□□□□□ -1.37
LIG4-202ENST00000405925 MIAQ16674 131 aa6.46□□□□□ -1.37
LIG4-202ENST00000405925 CDC42SE2Q9NRR3 84 aa6.46□□□□□ -1.37
LIG4-202ENST00000405925 IGKV2-24A0A0C4DH68 120 aa6.46□□□□□ -1.38
LIG4-202ENST00000405925 TMEM223A0PJW6 202 aa6.46□□□□□ -1.38
LIG4-202ENST00000405925 A0A0J9YXY3 114 aa6.46□□□□□ -1.38
LIG4-202ENST00000405925 UBE2V1Q13404 147 aa6.46□□□□□ -1.38
LIG4-202ENST00000405925 NFE4Q86UQ8 179 aa6.46□□□□□ -1.38
LIG4-202ENST00000405925 MRPS36P82909 103 aaKnown RBP6.45□□□□□ -1.38
LIG4-202ENST00000405925 POM121L12Q8N7R1 296 aa6.45□□□□□ -1.38
LIG4-202ENST00000405925 X6R8D5 127 aa6.45□□□□□ -1.38
LIG4-202ENST00000405925 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.45□□□□□ -1.38
LIG4-202ENST00000405925 TRAV8-4A0A0B4J246 113 aa6.45□□□□□ -1.38
LIG4-202ENST00000405925 CHCHD7Q9BUK0 85 aa6.45□□□□□ -1.38
LIG4-202ENST00000405925 IGLV4-60A0A075B6I1 120 aa6.45□□□□□ -1.38
LIG4-202ENST00000405925 TRBV20-1A0A075B6N2 111 aa6.45□□□□□ -1.38
LIG4-202ENST00000405925 CD164L2Q6UWJ8 174 aa6.45□□□□□ -1.38
LIG4-202ENST00000405925 TTC32Q5I0X7 151 aa6.45□□□□□ -1.38
LIG4-202ENST00000405925 SBSPONQ8IVN8 264 aa6.45□□□□□ -1.38
LIG4-202ENST00000405925 MAPKAPK5-AS1Q8N8E1 139 aa6.45□□□□□ -1.38
LIG4-202ENST00000405925 A0A096LNJ9 63 aa6.44□□□□□ -1.38
LIG4-202ENST00000405925 A0A1W2PPM0 123 aa6.44□□□□□ -1.38
LIG4-202ENST00000405925 LINC00315P59091 139 aa6.44□□□□□ -1.38
LIG4-202ENST00000405925 PTH2Q96A98 100 aa6.44□□□□□ -1.38
LIG4-202ENST00000405925 APCP25054 2843 aa6.44□□□□□ -1.38
LIG4-202ENST00000405925 LY6G6CO95867 125 aa6.44□□□□□ -1.38
LIG4-202ENST00000405925 UBE2D1P51668 147 aa6.44□□□□□ -1.38
LIG4-202ENST00000405925 ZANQ9Y493 2812 aa6.44□□□□□ -1.38
LIG4-202ENST00000405925 F8WEM9 126 aa6.44□□□□□ -1.38
LIG4-202ENST00000405925 H3BMG7 143 aa6.44□□□□□ -1.38
LIG4-202ENST00000405925 NCR3O14931 201 aa6.44□□□□□ -1.38
LIG4-202ENST00000405925 Q9UF83 564 aa6.43□□□□□ -1.38
LIG4-202ENST00000405925 K7EP13 123 aa6.43□□□□□ -1.38
LIG4-202ENST00000405925 LINC00242Q5T6M2 205 aa6.43□□□□□ -1.38
LIG4-202ENST00000405925 UFSP1Q6NVU6 142 aa6.43□□□□□ -1.38
LIG4-202ENST00000405925 XAGE1AQ9HD64 81 aa6.43□□□□□ -1.38
LIG4-202ENST00000405925 C14orf177Q52M58 125 aa6.42□□□□□ -1.38
LIG4-202ENST00000405925 PKIGQ9Y2B9 76 aa6.42□□□□□ -1.38
LIG4-202ENST00000405925 HIVEP1P15822 2718 aa6.42□□□□□ -1.38
LIG4-202ENST00000405925 ETDCA0A1B0GVM5 59 aa6.42□□□□□ -1.38
LIG4-202ENST00000405925 NUPR2A6NF83 97 aa6.42□□□□□ -1.38
LIG4-202ENST00000405925 SCGB1A1P11684 91 aa6.42□□□□□ -1.38
LIG4-202ENST00000405925 ETDBQ3ZM63 59 aa6.42□□□□□ -1.38
LIG4-202ENST00000405925 NPSP0C0P6 89 aa6.41□□□□□ -1.38
LIG4-202ENST00000405925 SYCNQ0VAF6 134 aa6.41□□□□□ -1.38
LIG4-202ENST00000405925 WFDC10BQ8IUB3 73 aa6.41□□□□□ -1.38
LIG4-202ENST00000405925 K7EP34 96 aa6.4□□□□□ -1.38
LIG4-202ENST00000405925 TMEM126AQ9H061 195 aa6.4□□□□□ -1.38
LIG4-202ENST00000405925 DCHS1Q96JQ0 3298 aa6.4□□□□□ -1.39
LIG4-202ENST00000405925 IBA57-AS1B1ANH7 110 aa6.4□□□□□ -1.39
LIG4-202ENST00000405925 LYPD5Q6UWN5 251 aa6.4□□□□□ -1.39
LIG4-202ENST00000405925 CARD19Q96LW7 228 aa6.4□□□□□ -1.39
LIG4-202ENST00000405925 NBEAL1Q6ZS30 2694 aa6.4□□□□□ -1.39
LIG4-202ENST00000405925 NHLRC4P0CG21 123 aaPredicted RBP6.4□□□□□ -1.39
LIG4-202ENST00000405925 Q8NAQ8 132 aa6.4□□□□□ -1.39
LIG4-202ENST00000405925 SPANXCQ9NY87 97 aa6.4□□□□□ -1.39
LIG4-202ENST00000405925 C19orf73Q9NVV2 129 aa6.39□□□□□ -1.39
LIG4-202ENST00000405925 DEFB105AQ8NG35 78 aa6.38□□□□□ -1.39
LIG4-202ENST00000405925 CSDC2Q9Y534 153 aaKnown RBP6.38□□□□□ -1.39
LIG4-202ENST00000405925 CRYBG3Q68DQ2 2970 aa6.38□□□□□ -1.39
LIG4-202ENST00000405925 A8MTW9 85 aa6.38□□□□□ -1.39
LIG4-202ENST00000405925 KRTAP10-11P60412 298 aa6.38□□□□□ -1.39
LIG4-202ENST00000405925 NTM-AS1Q6ZSK4 140 aa6.38□□□□□ -1.39
LIG4-202ENST00000405925 IGLV4-69A0A075B6H9 119 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms