RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 M0QY20 66 aa2.84□□□□□ -1.95
HMGB3P19-201ENST00000403971 DEFB4AO15263 64 aa2.84□□□□□ -1.95
HMGB3P19-201ENST00000403971 HIST1H2BKO60814 126 aa2.84□□□□□ -1.95
HMGB3P19-201ENST00000403971 HIST1H2BJP06899 126 aa2.84□□□□□ -1.95
HMGB3P19-201ENST00000403971 MGPP08493 103 aa2.84□□□□□ -1.95
HMGB3P19-201ENST00000403971 DEFB130BP0DP73 79 aa2.84□□□□□ -1.95
HMGB3P19-201ENST00000403971 DEFB130AP0DP74 79 aa2.84□□□□□ -1.95
HMGB3P19-201ENST00000403971 HIST1H2BOP23527 126 aa2.84□□□□□ -1.95
HMGB3P19-201ENST00000403971 HIST1H2BBP33778 126 aa2.84□□□□□ -1.95
HMGB3P19-201ENST00000403971 HIST1H2BDP58876 126 aa2.84□□□□□ -1.95
HMGB3P19-201ENST00000403971 RAB5BP61020 215 aa2.84□□□□□ -1.95
HMGB3P19-201ENST00000403971 HIST1H2BCP62807 126 aa2.84□□□□□ -1.95
HMGB3P19-201ENST00000403971 Q0VG73 95 aa2.84□□□□□ -1.95
HMGB3P19-201ENST00000403971 RHOHQ15669 191 aa2.84□□□□□ -1.95
HMGB3P19-201ENST00000403971 ZNF56Q15929 161 aa2.84□□□□□ -1.95
HMGB3P19-201ENST00000403971 HIST2H2BEQ16778 126 aa2.84□□□□□ -1.95
HMGB3P19-201ENST00000403971 C12orf74Q32Q52 190 aa2.84□□□□□ -1.95
HMGB3P19-201ENST00000403971 OR10J3Q5JRS4 329 aa2.84□□□□□ -1.95
HMGB3P19-201ENST00000403971 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.84□□□□□ -1.95
HMGB3P19-201ENST00000403971 FAM74A4Q5TZK3 123 aa2.84□□□□□ -1.95
HMGB3P19-201ENST00000403971 HIST1H2BHQ93079 126 aa2.84□□□□□ -1.95
HMGB3P19-201ENST00000403971 PRELID3AQ96N28 172 aa2.84□□□□□ -1.95
HMGB3P19-201ENST00000403971 HIST1H2BNQ99877 126 aa2.84□□□□□ -1.95
HMGB3P19-201ENST00000403971 HIST1H2BMQ99879 126 aa2.84□□□□□ -1.95
HMGB3P19-201ENST00000403971 NIT2Q9NQR4 276 aa2.84□□□□□ -1.95
HMGB3P19-201ENST00000403971 PRO0255Q9UI72 69 aa2.84□□□□□ -1.95
HMGB3P19-201ENST00000403971 TRBV7-3A0A075B6L6 115 aa2.83□□□□□ -1.96
HMGB3P19-201ENST00000403971 TRBV27A0A0K0K1C4 114 aa2.83□□□□□ -1.96
HMGB3P19-201ENST00000403971 TCAPO15273 167 aa2.83□□□□□ -1.96
HMGB3P19-201ENST00000403971 SRIP30626 198 aa2.83□□□□□ -1.96
HMGB3P19-201ENST00000403971 CRYBA4P53673 196 aa2.83□□□□□ -1.96
HMGB3P19-201ENST00000403971 POLR2KP53803 58 aaKnown RBP2.83□□□□□ -1.96
HMGB3P19-201ENST00000403971 SLC25A29Q8N8R3 303 aa2.83□□□□□ -1.96
HMGB3P19-201ENST00000403971 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.83□□□□□ -1.96
HMGB3P19-201ENST00000403971 C18orf32Q8TCD1 76 aa2.83□□□□□ -1.96
HMGB3P19-201ENST00000403971 PRADC1Q9BSG0 188 aa2.83□□□□□ -1.96
HMGB3P19-201ENST00000403971 TMEM70Q9BUB7 260 aa2.83□□□□□ -1.96
HMGB3P19-201ENST00000403971 MAP1LC3AQ9H492 121 aa2.83□□□□□ -1.96
HMGB3P19-201ENST00000403971 ST20Q9HBF5 79 aa2.83□□□□□ -1.96
HMGB3P19-201ENST00000403971 NXT2Q9NPJ8 142 aaKnown RBP2.83□□□□□ -1.96
HMGB3P19-201ENST00000403971 HHLA3Q9XRX5 114 aa2.83□□□□□ -1.96
HMGB3P19-201ENST00000403971 PLECQ15149 4684 aaKnown RBP2.83□□□□□ -1.96
HMGB3P19-201ENST00000403971 IGLV2-18A0A075B6J9 118 aa2.82□□□□□ -1.96
HMGB3P19-201ENST00000403971 IGHV3-73A0A0B4J1V6 119 aa2.82□□□□□ -1.96
HMGB3P19-201ENST00000403971 TRAV10A0A0B4J240 114 aa2.82□□□□□ -1.96
HMGB3P19-201ENST00000403971 TRAV26-2A0A0B4J265 109 aa2.82□□□□□ -1.96
HMGB3P19-201ENST00000403971 SDHAF1A6NFY7 115 aa2.82□□□□□ -1.96
HMGB3P19-201ENST00000403971 LINC01546A6NGU7 62 aa2.82□□□□□ -1.96
HMGB3P19-201ENST00000403971 LINC01549A6NIU2 74 aa2.82□□□□□ -1.96
HMGB3P19-201ENST00000403971 SMKR1H3BMG3 65 aa2.82□□□□□ -1.96
HMGB3P19-201ENST00000403971 NCR2O95944 276 aa2.82□□□□□ -1.96
HMGB3P19-201ENST00000403971 NPYP01303 97 aa2.82□□□□□ -1.96
HMGB3P19-201ENST00000403971 LINC00614P0C842 121 aa2.82□□□□□ -1.96
HMGB3P19-201ENST00000403971 LINC00694P0DN24 101 aa2.82□□□□□ -1.96
HMGB3P19-201ENST00000403971 ESDP10768 282 aa2.82□□□□□ -1.96
HMGB3P19-201ENST00000403971 PMCHP20382 165 aa2.82□□□□□ -1.96
HMGB3P19-201ENST00000403971 G0S2P27469 103 aa2.82□□□□□ -1.96
HMGB3P19-201ENST00000403971 C5orf47Q569G3 176 aa2.82□□□□□ -1.96
HMGB3P19-201ENST00000403971 TMEM97Q5BJF2 176 aa2.82□□□□□ -1.96
HMGB3P19-201ENST00000403971 DAZ4Q86SG3 579 aaKnown RBP2.82□□□□□ -1.96
HMGB3P19-201ENST00000403971 BAGE3Q86Y29 109 aa2.82□□□□□ -1.96
HMGB3P19-201ENST00000403971 Q8N8P6 123 aa2.82□□□□□ -1.96
HMGB3P19-201ENST00000403971 CHCHD1Q96BP2 118 aaKnown RBP2.82□□□□□ -1.96
HMGB3P19-201ENST00000403971 RPL39LQ96EH5 51 aaKnown RBP2.82□□□□□ -1.96
HMGB3P19-201ENST00000403971 SMIM2Q9BVW6 85 aa2.82□□□□□ -1.96
HMGB3P19-201ENST00000403971 KRTAP4-4Q9BYR3 166 aa2.82□□□□□ -1.96
HMGB3P19-201ENST00000403971 MEGF8Q7Z7M0 2845 aa2.82□□□□□ -1.96
HMGB3P19-201ENST00000403971 DYNC2H1Q8NCM8 4307 aaKnown RBP2.81□□□□□ -1.96
HMGB3P19-201ENST00000403971 IGLV1-50A0A075B6I6 118 aa2.81□□□□□ -1.96
HMGB3P19-201ENST00000403971 DEFB131BA0A096LNP1 70 aa2.81□□□□□ -1.96
HMGB3P19-201ENST00000403971 F5H768 121 aa2.81□□□□□ -1.96
HMGB3P19-201ENST00000403971 I3L3M4 83 aa2.81□□□□□ -1.96
HMGB3P19-201ENST00000403971 TCTAP57738 103 aa2.81□□□□□ -1.96
HMGB3P19-201ENST00000403971 UBE2D3P61077 147 aa2.81□□□□□ -1.96
HMGB3P19-201ENST00000403971 UBE2D2P62837 147 aa2.81□□□□□ -1.96
HMGB3P19-201ENST00000403971 ORMDL2Q53FV1 153 aa2.81□□□□□ -1.96
HMGB3P19-201ENST00000403971 NIT1Q86X76 327 aa2.81□□□□□ -1.96
HMGB3P19-201ENST00000403971 C15orf53Q8NAA6 179 aa2.81□□□□□ -1.96
HMGB3P19-201ENST00000403971 ZNRF2Q8NHG8 242 aa2.81□□□□□ -1.96
HMGB3P19-201ENST00000403971 PACRGQ96M98 296 aaPredicted RBP2.81□□□□□ -1.96
HMGB3P19-201ENST00000403971 GTSF1LQ9H1H1 148 aa2.81□□□□□ -1.96
HMGB3P19-201ENST00000403971 FBN3Q75N90 2809 aa2.8□□□□□ -1.96
HMGB3P19-201ENST00000403971 A0A096LPF7 62 aa2.8□□□□□ -1.96
HMGB3P19-201ENST00000403971 LOC389332A0A1B0GUA5 103 aa2.8□□□□□ -1.96
HMGB3P19-201ENST00000403971 TMEM223A0PJW6 202 aa2.8□□□□□ -1.96
HMGB3P19-201ENST00000403971 HSBP1O75506 76 aa2.8□□□□□ -1.96
HMGB3P19-201ENST00000403971 S100A6P06703 90 aa2.8□□□□□ -1.96
HMGB3P19-201ENST00000403971 P0DMU3 169 aa2.8□□□□□ -1.96
HMGB3P19-201ENST00000403971 FAM231AP0DMU4 169 aa2.8□□□□□ -1.96
HMGB3P19-201ENST00000403971 FAM231CP0DMU5 169 aa2.8□□□□□ -1.96
HMGB3P19-201ENST00000403971 IFI27P40305 119 aaPredicted RBP2.8□□□□□ -1.96
HMGB3P19-201ENST00000403971 COTL1Q14019 142 aa2.8□□□□□ -1.96
HMGB3P19-201ENST00000403971 IQCJQ1A5X6 159 aa2.8□□□□□ -1.96
HMGB3P19-201ENST00000403971 FA2HQ7L5A8 372 aa2.8□□□□□ -1.96
HMGB3P19-201ENST00000403971 ATP6V0E2Q8NHE4 81 aa2.8□□□□□ -1.96
HMGB3P19-201ENST00000403971 TIMM17AQ99595 171 aa2.8□□□□□ -1.96
HMGB3P19-201ENST00000403971 GEMIN7Q9H840 131 aaKnown RBP2.8□□□□□ -1.96
HMGB3P19-201ENST00000403971 ICOSQ9Y6W8 199 aa2.8□□□□□ -1.96
HMGB3P19-201ENST00000403971 STARD9Q9P2P6 4700 aa2.8□□□□□ -1.96
HMGB3P19-201ENST00000403971 DNAH7Q8WXX0 4024 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms