RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 KIAA0087Q14695 138 aa6.91□□□□□ -1.3
SPTLC1P3-201ENST00000403408 KRTAP13-2Q52LG2 175 aa6.91□□□□□ -1.3
SPTLC1P3-201ENST00000403408 OR10D4PQ8NGN7 298 aa6.91□□□□□ -1.3
SPTLC1P3-201ENST00000403408 IMMP2LQ96T52 175 aa6.91□□□□□ -1.3
SPTLC1P3-201ENST00000403408 RAB4AP20338 218 aa6.9□□□□□ -1.3
SPTLC1P3-201ENST00000403408 NDUFA1O15239 70 aa6.89□□□□□ -1.31
SPTLC1P3-201ENST00000403408 ZNF345Q14585 488 aa6.89□□□□□ -1.31
SPTLC1P3-201ENST00000403408 NRACQ8N912 160 aa6.89□□□□□ -1.31
SPTLC1P3-201ENST00000403408 TPRXLQ17RH7 258 aa6.88□□□□□ -1.31
SPTLC1P3-201ENST00000403408 SMIM15Q7Z3B0 74 aa6.88□□□□□ -1.31
SPTLC1P3-201ENST00000403408 AMN1Q8IY45 258 aa6.88□□□□□ -1.31
SPTLC1P3-201ENST00000403408 BIN3Q9NQY0 253 aa6.88□□□□□ -1.31
SPTLC1P3-201ENST00000403408 PDE6DO43924 150 aa6.87□□□□□ -1.31
SPTLC1P3-201ENST00000403408 RPL39P62891 51 aaKnown RBP6.87□□□□□ -1.31
SPTLC1P3-201ENST00000403408 TMEM241Q24JQ0 296 aa6.87□□□□□ -1.31
SPTLC1P3-201ENST00000403408 C2orf82Q6UX34 121 aa6.87□□□□□ -1.31
SPTLC1P3-201ENST00000403408 TYMSOSQ8TAI1 123 aa6.87□□□□□ -1.31
SPTLC1P3-201ENST00000403408 CDIP1Q9H305 208 aa6.87□□□□□ -1.31
SPTLC1P3-201ENST00000403408 F8WDY8 70 aa6.86□□□□□ -1.31
SPTLC1P3-201ENST00000403408 VCYO14598 125 aa6.86□□□□□ -1.31
SPTLC1P3-201ENST00000403408 FAM210AQ96ND0 272 aa6.86□□□□□ -1.31
SPTLC1P3-201ENST00000403408 TIMM21Q9BVV7 248 aa6.86□□□□□ -1.31
SPTLC1P3-201ENST00000403408 CTDSP1Q9GZU7 261 aa6.86□□□□□ -1.31
SPTLC1P3-201ENST00000403408 TMEM191AQ9H0A3 160 aa6.86□□□□□ -1.31
SPTLC1P3-201ENST00000403408 GATCO43716 136 aaKnown RBP6.85□□□□□ -1.31
SPTLC1P3-201ENST00000403408 CRYGAP11844 174 aa6.85□□□□□ -1.31
SPTLC1P3-201ENST00000403408 FCER1GP30273 86 aa6.85□□□□□ -1.31
SPTLC1P3-201ENST00000403408 C22orf24Q9Y442 160 aa6.85□□□□□ -1.31
SPTLC1P3-201ENST00000403408 IGLV7-46A0A075B6I9 117 aa6.84□□□□□ -1.31
SPTLC1P3-201ENST00000403408 NDUFC2-KCTD14E9PQ53 114 aa6.84□□□□□ -1.31
SPTLC1P3-201ENST00000403408 LINC00242Q5T6M2 205 aa6.84□□□□□ -1.31
SPTLC1P3-201ENST00000403408 HMSDA8MTL9 139 aa6.83□□□□□ -1.32
SPTLC1P3-201ENST00000403408 SUMO2P61956 95 aaKnown RBP6.83□□□□□ -1.32
SPTLC1P3-201ENST00000403408 FAM231DQ6ZW35 169 aa6.83□□□□□ -1.32
SPTLC1P3-201ENST00000403408 LINC00469Q8N7U9 141 aa6.83□□□□□ -1.32
SPTLC1P3-201ENST00000403408 A0A1B0GUT8 65 aa6.82□□□□□ -1.32
SPTLC1P3-201ENST00000403408 KANTRA0A1W2PQU2 76 aa6.82□□□□□ -1.32
SPTLC1P3-201ENST00000403408 A8MWL6 223 aa6.82□□□□□ -1.32
SPTLC1P3-201ENST00000403408 NUPR1O60356 82 aa6.82□□□□□ -1.32
SPTLC1P3-201ENST00000403408 TRBV30A0A0K0K1B3 111 aa6.81□□□□□ -1.32
SPTLC1P3-201ENST00000403408 HIGD1CA8MV81 97 aa6.81□□□□□ -1.32
SPTLC1P3-201ENST00000403408 KRTAP13-1Q8IUC0 172 aa6.81□□□□□ -1.32
SPTLC1P3-201ENST00000403408 BCE1O60756 84 aa6.8□□□□□ -1.32
SPTLC1P3-201ENST00000403408 CT83Q5H943 113 aa6.8□□□□□ -1.32
SPTLC1P3-201ENST00000403408 LINC00173Q6ZV60 143 aa6.8□□□□□ -1.32
SPTLC1P3-201ENST00000403408 LINC00304Q8N9R0 145 aa6.8□□□□□ -1.32
SPTLC1P3-201ENST00000403408 XAGE1AQ9HD64 81 aa6.8□□□□□ -1.32
SPTLC1P3-201ENST00000403408 IFITM10A6NMD0 228 aa6.79□□□□□ -1.32
SPTLC1P3-201ENST00000403408 MRPS36P82909 103 aaKnown RBP6.79□□□□□ -1.32
SPTLC1P3-201ENST00000403408 MRPL51Q4U2R6 128 aaKnown RBP6.79□□□□□ -1.32
SPTLC1P3-201ENST00000403408 KIR2DL4Q99706 377 aa6.79□□□□□ -1.32
SPTLC1P3-201ENST00000403408 PPDPFQ9H3Y8 114 aa6.79□□□□□ -1.32
SPTLC1P3-201ENST00000403408 RPL28P46779 137 aaKnown RBP6.78□□□□□ -1.32
SPTLC1P3-201ENST00000403408 LINC01547P58512 204 aaPredicted RBP6.78□□□□□ -1.32
SPTLC1P3-201ENST00000403408 SRSF3P84103 164 aaKnown RBP6.78□□□□□ -1.32
SPTLC1P3-201ENST00000403408 MRPL18Q9H0U6 180 aaKnown RBP6.78□□□□□ -1.32
SPTLC1P3-201ENST00000403408 ZNF727A8MUV8 499 aa6.77□□□□□ -1.33
SPTLC1P3-201ENST00000403408 HBBP68871 147 aa6.77□□□□□ -1.33
SPTLC1P3-201ENST00000403408 SMAGPQ0VAQ4 97 aa6.77□□□□□ -1.33
SPTLC1P3-201ENST00000403408 ZC2HC1BQ5TFG8 222 aa6.77□□□□□ -1.33
SPTLC1P3-201ENST00000403408 SPANXA1Q9NS26 97 aa6.77□□□□□ -1.33
SPTLC1P3-201ENST00000403408 RPL37AP8A6NKH3 93 aa6.76□□□□□ -1.33
SPTLC1P3-201ENST00000403408 TCAPO15273 167 aa6.76□□□□□ -1.33
SPTLC1P3-201ENST00000403408 ASB16-AS1Q495Z4 193 aa6.76□□□□□ -1.33
SPTLC1P3-201ENST00000403408 FAM104BQ5XKR9 115 aa6.76□□□□□ -1.33
SPTLC1P3-201ENST00000403408 MRPL55Q7Z7F7 128 aaKnown RBP6.76□□□□□ -1.33
SPTLC1P3-201ENST00000403408 PACRGQ96M98 296 aaPredicted RBP6.76□□□□□ -1.33
SPTLC1P3-201ENST00000403408 LINC00167Q96N53 147 aa6.76□□□□□ -1.33
SPTLC1P3-201ENST00000403408 IGLV4-3A0A075B6K6 122 aa6.75□□□□□ -1.33
SPTLC1P3-201ENST00000403408 TRBV24-1A0A075B6N3 115 aa6.75□□□□□ -1.33
SPTLC1P3-201ENST00000403408 TGIF2-C20orf24A0A0A6YYL0 155 aa6.75□□□□□ -1.33
SPTLC1P3-201ENST00000403408 TEX46H3BTG2 121 aa6.75□□□□□ -1.33
SPTLC1P3-201ENST00000403408 RPL32P62910 135 aaKnown RBP6.75□□□□□ -1.33
SPTLC1P3-201ENST00000403408 KRTAP19-2Q3LHN2 52 aa6.75□□□□□ -1.33
SPTLC1P3-201ENST00000403408 LBHQ53QV2 105 aaPredicted RBP6.75□□□□□ -1.33
SPTLC1P3-201ENST00000403408 LCE1DQ5T752 114 aa6.75□□□□□ -1.33
SPTLC1P3-201ENST00000403408 TMEM18Q96B42 140 aa6.75□□□□□ -1.33
SPTLC1P3-201ENST00000403408 BORCS7Q96B45 105 aa6.75□□□□□ -1.33
SPTLC1P3-201ENST00000403408 TP73-AS1Q9UF72 201 aa6.75□□□□□ -1.33
SPTLC1P3-201ENST00000403408 PPP1R2P9O14990 202 aa6.74□□□□□ -1.33
SPTLC1P3-201ENST00000403408 KRTAP13-3Q3SY46 172 aa6.74□□□□□ -1.33
SPTLC1P3-201ENST00000403408 FAM229BQ4G0N7 80 aa6.74□□□□□ -1.33
SPTLC1P3-201ENST00000403408 LINC01551Q86U37 167 aa6.74□□□□□ -1.33
SPTLC1P3-201ENST00000403408 C20orf78Q9BR46 151 aa6.74□□□□□ -1.33
SPTLC1P3-201ENST00000403408 SMIM2Q9BVW6 85 aa6.74□□□□□ -1.33
SPTLC1P3-201ENST00000403408 KRTAP4-7Q9BYR0 210 aa6.74□□□□□ -1.33
SPTLC1P3-201ENST00000403408 V9GYV3 84 aa6.74□□□□□ -1.33
SPTLC1P3-201ENST00000403408 GAGE10A6NGK3 116 aa6.73□□□□□ -1.33
SPTLC1P3-201ENST00000403408 TMEM250H0YL14 139 aa6.73□□□□□ -1.33
SPTLC1P3-201ENST00000403408 TNFRSF6BO95407 300 aa6.73□□□□□ -1.33
SPTLC1P3-201ENST00000403408 PPP1R17O96001 155 aa6.73□□□□□ -1.33
SPTLC1P3-201ENST00000403408 C3orf22Q8N5N4 141 aa6.73□□□□□ -1.33
SPTLC1P3-201ENST00000403408 BATF3Q9NR55 127 aa6.73□□□□□ -1.33
SPTLC1P3-201ENST00000403408 OSTCQ9NRP0 149 aa6.73□□□□□ -1.33
SPTLC1P3-201ENST00000403408 NPYP01303 97 aa6.72□□□□□ -1.33
SPTLC1P3-201ENST00000403408 RIGQ13278 110 aa6.72□□□□□ -1.33
SPTLC1P3-201ENST00000403408 SCO1O75880 301 aa6.71□□□□□ -1.34
SPTLC1P3-201ENST00000403408 TAGLN2P37802 199 aaKnown RBP6.71□□□□□ -1.34
SPTLC1P3-201ENST00000403408 CEBPGP53567 150 aa6.71□□□□□ -1.34
SPTLC1P3-201ENST00000403408 LINC01561Q8N1V8 128 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms