RNA–Protein interactions for RNA: ENST00000403073.1

PTCHD3P3-201, Transcript of patched domain containing 3 pseudogene 3, humanhuman

BASIC

Gene PTCHD3P3, Length 906 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P3-201ENST00000403073 LINC01620Q4KN68 170 aa11.19□□□□□ -0.62
PTCHD3P3-201ENST00000403073 DNAH5Q8TE73 4624 aa11.19□□□□□ -0.62
PTCHD3P3-201ENST00000403073 IGHV3OR16-9A0A0B4J2B5 98 aa11.18□□□□□ -0.62
PTCHD3P3-201ENST00000403073 IGHV1-58A0A0C4DH39 117 aa11.18□□□□□ -0.62
PTCHD3P3-201ENST00000403073 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.18□□□□□ -0.62
PTCHD3P3-201ENST00000403073 SLPIP03973 132 aa11.18□□□□□ -0.62
PTCHD3P3-201ENST00000403073 PDZD11Q5EBL8 140 aa11.18□□□□□ -0.62
PTCHD3P3-201ENST00000403073 LINC00526Q96FQ7 95 aa11.17□□□□□ -0.62
PTCHD3P3-201ENST00000403073 CST9LQ9H4G1 147 aa11.17□□□□□ -0.62
PTCHD3P3-201ENST00000403073 GVQW2A0A096LPI5 108 aaPredicted RBP11.16□□□□□ -0.62
PTCHD3P3-201ENST00000403073 HSBP1O75506 76 aa11.16□□□□□ -0.62
PTCHD3P3-201ENST00000403073 SERF1AO75920 110 aa11.16□□□□□ -0.62
PTCHD3P3-201ENST00000403073 LINC00310P59036 64 aa11.16□□□□□ -0.62
PTCHD3P3-201ENST00000403073 FAM19A2Q8N3H0 131 aa11.16□□□□□ -0.62
PTCHD3P3-201ENST00000403073 A0A0J9YXV3 536 aa11.15□□□□□ -0.62
PTCHD3P3-201ENST00000403073 NUPR1O60356 82 aa11.15□□□□□ -0.62
PTCHD3P3-201ENST00000403073 PMVKQ15126 192 aa11.15□□□□□ -0.62
PTCHD3P3-201ENST00000403073 HIST1H2BKO60814 126 aa11.14□□□□□ -0.63
PTCHD3P3-201ENST00000403073 HIST1H2BJP06899 126 aa11.14□□□□□ -0.63
PTCHD3P3-201ENST00000403073 HIST1H2BOP23527 126 aa11.14□□□□□ -0.63
PTCHD3P3-201ENST00000403073 HIST1H2BBP33778 126 aa11.14□□□□□ -0.63
PTCHD3P3-201ENST00000403073 NDUFA6P56556 154 aa11.14□□□□□ -0.63
PTCHD3P3-201ENST00000403073 HIST1H2BDP58876 126 aa11.14□□□□□ -0.63
PTCHD3P3-201ENST00000403073 CNBPP62633 177 aaKnown RBP11.14□□□□□ -0.63
PTCHD3P3-201ENST00000403073 HIST1H2BCP62807 126 aa11.14□□□□□ -0.63
PTCHD3P3-201ENST00000403073 HIST2H2BEQ16778 126 aa11.14□□□□□ -0.63
PTCHD3P3-201ENST00000403073 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.14□□□□□ -0.63
PTCHD3P3-201ENST00000403073 FAM19A3Q7Z5A8 133 aa11.14□□□□□ -0.63
PTCHD3P3-201ENST00000403073 HIST1H2BHQ93079 126 aa11.14□□□□□ -0.63
PTCHD3P3-201ENST00000403073 HIST1H2BNQ99877 126 aa11.14□□□□□ -0.63
PTCHD3P3-201ENST00000403073 HIST1H2BMQ99879 126 aa11.14□□□□□ -0.63
PTCHD3P3-201ENST00000403073 LRP1BQ9NZR2 4599 aa11.14□□□□□ -0.63
PTCHD3P3-201ENST00000403073 ATP5LO75964 103 aa11.13□□□□□ -0.63
PTCHD3P3-201ENST00000403073 IGLV4-69A0A075B6H9 119 aa11.12□□□□□ -0.63
PTCHD3P3-201ENST00000403073 IGHV3-64A0A075B6Q5 118 aa11.12□□□□□ -0.63
PTCHD3P3-201ENST00000403073 A0A087WZ39 114 aa11.12□□□□□ -0.63
PTCHD3P3-201ENST00000403073 ZNF561-AS1K7EIQ3 104 aa11.12□□□□□ -0.63
PTCHD3P3-201ENST00000403073 APOMO95445 188 aa11.12□□□□□ -0.63
PTCHD3P3-201ENST00000403073 C9orf163Q8N9P6 203 aa11.12□□□□□ -0.63
PTCHD3P3-201ENST00000403073 GEMIN7Q9H840 131 aaKnown RBP11.12□□□□□ -0.63
PTCHD3P3-201ENST00000403073 HERVK_113P63121 156 aa11.11□□□□□ -0.63
PTCHD3P3-201ENST00000403073 SEC11AP67812 179 aa11.11□□□□□ -0.63
PTCHD3P3-201ENST00000403073 FAM30AQ9NZY2 134 aa11.11□□□□□ -0.63
PTCHD3P3-201ENST00000403073 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.1□□□□□ -0.63
PTCHD3P3-201ENST00000403073 ORAOV1Q8WV07 137 aa11.1□□□□□ -0.63
PTCHD3P3-201ENST00000403073 CDKN2A-AS1Q9UH64 79 aa11.1□□□□□ -0.63
PTCHD3P3-201ENST00000403073 TINCRA0A1B0GVN0 87 aa11.09□□□□□ -0.63
PTCHD3P3-201ENST00000403073 SPAG11BQ08648 103 aa11.09□□□□□ -0.63
PTCHD3P3-201ENST00000403073 OR10D4PQ8NGN7 298 aa11.09□□□□□ -0.63
PTCHD3P3-201ENST00000403073 IFI27L1Q96BM0 104 aa11.09□□□□□ -0.63
PTCHD3P3-201ENST00000403073 KIAA1109Q2LD37 5005 aa11.08□□□□□ -0.64
PTCHD3P3-201ENST00000403073 CDK2AP2O75956 126 aa11.08□□□□□ -0.64
PTCHD3P3-201ENST00000403073 LINC00469Q8N7U9 141 aa11.08□□□□□ -0.64
PTCHD3P3-201ENST00000403073 XGP55808 180 aa11.07□□□□□ -0.64
PTCHD3P3-201ENST00000403073 SYCNQ0VAF6 134 aa11.07□□□□□ -0.64
PTCHD3P3-201ENST00000403073 SDIM1Q6ZPB5 146 aa11.07□□□□□ -0.64
PTCHD3P3-201ENST00000403073 LINC01561Q8N1V8 128 aa11.07□□□□□ -0.64
PTCHD3P3-201ENST00000403073 LEPROTL1O95214 131 aa11.06□□□□□ -0.64
PTCHD3P3-201ENST00000403073 FABP4P15090 132 aa11.06□□□□□ -0.64
PTCHD3P3-201ENST00000403073 HAMPP81172 84 aa11.06□□□□□ -0.64
PTCHD3P3-201ENST00000403073 Q6ZRU5 148 aa11.06□□□□□ -0.64
PTCHD3P3-201ENST00000403073 CAMK2N2Q96S95 79 aa11.06□□□□□ -0.64
PTCHD3P3-201ENST00000403073 IGLV5-45A0A087WSX0 123 aa11.05□□□□□ -0.64
PTCHD3P3-201ENST00000403073 IGLC3P0DOY3 106 aa11.05□□□□□ -0.64
PTCHD3P3-201ENST00000403073 KIAA0087Q14695 138 aa11.05□□□□□ -0.64
PTCHD3P3-201ENST00000403073 C2orf48Q96LS8 159 aa11.05□□□□□ -0.64
PTCHD3P3-201ENST00000403073 CARD19Q96LW7 228 aa11.05□□□□□ -0.64
PTCHD3P3-201ENST00000403073 Q6ZSA8 131 aa11.04□□□□□ -0.64
PTCHD3P3-201ENST00000403073 PACRGQ96M98 296 aaPredicted RBP11.04□□□□□ -0.64
PTCHD3P3-201ENST00000403073 CHAC1Q9BUX1 264 aa11.04□□□□□ -0.64
PTCHD3P3-201ENST00000403073 CHTOPQ9Y3Y2 248 aaKnown RBP11.04□□□□□ -0.64
PTCHD3P3-201ENST00000403073 APOBP04114 4563 aaKnown RBP11.04□□□□□ -0.64
PTCHD3P3-201ENST00000403073 TOMM7Q9P0U1 55 aa11.03□□□□□ -0.64
PTCHD3P3-201ENST00000403073 DNAH8Q96JB1 4490 aa11.02□□□□□ -0.65
PTCHD3P3-201ENST00000403073 TRAV12-1A0A0B4J245 112 aa11.02□□□□□ -0.65
PTCHD3P3-201ENST00000403073 H0Y8G0 127 aa11.02□□□□□ -0.65
PTCHD3P3-201ENST00000403073 SPINK8P0C7L1 97 aa11.02□□□□□ -0.65
PTCHD3P3-201ENST00000403073 C10orf25Q5T742 122 aa11.02□□□□□ -0.65
PTCHD3P3-201ENST00000403073 UNQ6190/PRO20217Q6UXQ8 127 aa11.02□□□□□ -0.65
PTCHD3P3-201ENST00000403073 HSPB8Q9UJY1 196 aa11.02□□□□□ -0.65
PTCHD3P3-201ENST00000403073 RYR1P21817 5038 aa11.02□□□□□ -0.65
PTCHD3P3-201ENST00000403073 C11orf86A6NJI1 115 aa11.01□□□□□ -0.65
PTCHD3P3-201ENST00000403073 SMIM1B2RUZ4 78 aa11.01□□□□□ -0.65
PTCHD3P3-201ENST00000403073 PANO1I0J062 215 aa11.01□□□□□ -0.65
PTCHD3P3-201ENST00000403073 PRSS2P07478 247 aa11.01□□□□□ -0.65
PTCHD3P3-201ENST00000403073 ZNF22P17026 224 aaPredicted RBP11.01□□□□□ -0.65
PTCHD3P3-201ENST00000403073 COA6Q5JTJ3 125 aaKnown RBP11.01□□□□□ -0.65
PTCHD3P3-201ENST00000403073 C2orf82Q6UX34 121 aa11.01□□□□□ -0.65
PTCHD3P3-201ENST00000403073 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.01□□□□□ -0.65
PTCHD3P3-201ENST00000403073 F8WDY8 70 aa11□□□□□ -0.65
PTCHD3P3-201ENST00000403073 H3BRM9 83 aa11□□□□□ -0.65
PTCHD3P3-201ENST00000403073 NDUFA1O15239 70 aa11□□□□□ -0.65
PTCHD3P3-201ENST00000403073 C6orf226Q5I0X4 101 aa11□□□□□ -0.65
PTCHD3P3-201ENST00000403073 MRPL35Q9NZE8 188 aaKnown RBP11□□□□□ -0.65
PTCHD3P3-201ENST00000403073 CHTF8P0CG12 524 aa10.99□□□□□ -0.65
PTCHD3P3-201ENST00000403073 Q8IZM0 81 aa10.99□□□□□ -0.65
PTCHD3P3-201ENST00000403073 KRTAP17-1Q9BYP8 105 aa10.99□□□□□ -0.65
PTCHD3P3-201ENST00000403073 F8VRH5 84 aa10.98□□□□□ -0.65
PTCHD3P3-201ENST00000403073 TMEM170BQ5T4T1 132 aa10.98□□□□□ -0.65
PTCHD3P3-201ENST00000403073 SCXQ7RTU7 201 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms