RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 FAM222AQ5U5X8 452 aa9.96□□□□□ -0.82
APOB-202ENST00000399256 FAM19A3Q7Z5A8 133 aa9.96□□□□□ -0.82
APOB-202ENST00000399256 CDC42SE2Q9NRR3 84 aa9.96□□□□□ -0.82
APOB-202ENST00000399256 RPL36AP83881 106 aaKnown RBP9.95□□□□□ -0.82
APOB-202ENST00000399256 DYNLRB2Q8TF09 96 aa9.95□□□□□ -0.82
APOB-202ENST00000399256 RPL36ALQ969Q0 106 aaKnown RBP9.95□□□□□ -0.82
APOB-202ENST00000399256 A0A087WYN8 130 aa9.95□□□□□ -0.82
APOB-202ENST00000399256 KHDC1LQ5JSQ8 128 aa9.95□□□□□ -0.82
APOB-202ENST00000399256 MIR7-3HGQ8N6C7 128 aa9.95□□□□□ -0.82
APOB-202ENST00000399256 LINC00526Q96FQ7 95 aa9.95□□□□□ -0.82
APOB-202ENST00000399256 TOMM7Q9P0U1 55 aa9.95□□□□□ -0.82
APOB-202ENST00000399256 ABCA12Q86UK0 2595 aa9.94□□□□□ -0.82
APOB-202ENST00000399256 CXCL5P42830 114 aa9.94□□□□□ -0.82
APOB-202ENST00000399256 TRAV13-2A0A0B4J235 113 aa9.94□□□□□ -0.82
APOB-202ENST00000399256 RPL28P46779 137 aaKnown RBP9.94□□□□□ -0.82
APOB-202ENST00000399256 DSCR9P59020 149 aa9.94□□□□□ -0.82
APOB-202ENST00000399256 IGKV2-28A0A075B6P5 120 aa9.93□□□□□ -0.82
APOB-202ENST00000399256 IGKV3OR2-268A0A0C4DH90 116 aa9.93□□□□□ -0.82
APOB-202ENST00000399256 LOC107984640A0A0U1RRK4 108 aa9.93□□□□□ -0.82
APOB-202ENST00000399256 K7EQD1 137 aa9.93□□□□□ -0.82
APOB-202ENST00000399256 IGKV2D-28P01615 120 aa9.93□□□□□ -0.82
APOB-202ENST00000399256 C14orf132Q9NPU4 83 aa9.93□□□□□ -0.82
APOB-202ENST00000399256 ZANQ9Y493 2812 aa9.93□□□□□ -0.82
APOB-202ENST00000399256 Q6ZTI0 123 aa9.93□□□□□ -0.82
APOB-202ENST00000399256 SND1-IT1Q9HBX3 110 aa9.93□□□□□ -0.82
APOB-202ENST00000399256 CSDC2Q9Y534 153 aaKnown RBP9.93□□□□□ -0.82
APOB-202ENST00000399256 DNAL4O96015 105 aa9.93□□□□□ -0.82
APOB-202ENST00000399256 C2CD3Q4AC94 2353 aa9.93□□□□□ -0.82
APOB-202ENST00000399256 APCP25054 2843 aa9.92□□□□□ -0.82
APOB-202ENST00000399256 ATP5G1P05496 136 aa9.92□□□□□ -0.82
APOB-202ENST00000399256 COX7CP15954 63 aa9.92□□□□□ -0.82
APOB-202ENST00000399256 UBE2L6O14933 153 aa9.92□□□□□ -0.82
APOB-202ENST00000399256 SMIM11BQ8TCY0 68 aa9.92□□□□□ -0.82
APOB-202ENST00000399256 CUBNO60494 3623 aa9.92□□□□□ -0.82
APOB-202ENST00000399256 IGKV3D-7A0A0C4DH55 119 aa9.91□□□□□ -0.82
APOB-202ENST00000399256 C1orf158Q8N1D5 194 aa9.91□□□□□ -0.82
APOB-202ENST00000399256 DEFB113Q30KQ7 82 aa9.91□□□□□ -0.82
APOB-202ENST00000399256 COX7B2Q8TF08 81 aa9.91□□□□□ -0.82
APOB-202ENST00000399256 C2orf48Q96LS8 159 aa9.91□□□□□ -0.82
APOB-202ENST00000399256 LINC00158P58513 81 aa9.91□□□□□ -0.82
APOB-202ENST00000399256 LINC01356Q8N9X3 169 aa9.91□□□□□ -0.82
APOB-202ENST00000399256 GCN1Q92616 2671 aaKnown RBP9.91□□□□□ -0.82
APOB-202ENST00000399256 A0A096LNT2 108 aa9.9□□□□□ -0.82
APOB-202ENST00000399256 PF4P02776 101 aa9.9□□□□□ -0.82
APOB-202ENST00000399256 DEFB114Q30KQ6 69 aa9.89□□□□□ -0.83
APOB-202ENST00000399256 LRRC75A-AS1Q8N1F1 130 aa9.89□□□□□ -0.83
APOB-202ENST00000399256 NAV2Q8IVL1 2488 aa9.89□□□□□ -0.83
APOB-202ENST00000399256 TMEM243Q9BU79 118 aa9.89□□□□□ -0.83
APOB-202ENST00000399256 MXRA5Q9NR99 2828 aa9.89□□□□□ -0.83
APOB-202ENST00000399256 LOC100131303A0A0U1RQF7 123 aa9.89□□□□□ -0.83
APOB-202ENST00000399256 hADV29S1A0JD25 119 aa9.89□□□□□ -0.83
APOB-202ENST00000399256 TRBV10-1A0A0K0K1A3 114 aa9.88□□□□□ -0.83
APOB-202ENST00000399256 HIST1H4AP62805 103 aaKnown RBP9.88□□□□□ -0.83
APOB-202ENST00000399256 ODF3L2Q3SX64 289 aa9.88□□□□□ -0.83
APOB-202ENST00000399256 STHQ8IWL8 128 aa9.88□□□□□ -0.83
APOB-202ENST00000399256 IL17DQ8TAD2 202 aa9.88□□□□□ -0.83
APOB-202ENST00000399256 ATOX1O00244 68 aa9.88□□□□□ -0.83
APOB-202ENST00000399256 LECT2O14960 151 aa9.88□□□□□ -0.83
APOB-202ENST00000399256 LINC00846Q9NV44 126 aa9.88□□□□□ -0.83
APOB-202ENST00000399256 SLPIP03973 132 aa9.87□□□□□ -0.83
APOB-202ENST00000399256 CCL18P55774 89 aa9.87□□□□□ -0.83
APOB-202ENST00000399256 Q6YL49 198 aa9.87□□□□□ -0.83
APOB-202ENST00000399256 CYSTM1Q9H1C7 97 aa9.87□□□□□ -0.83
APOB-202ENST00000399256 NOTCH3Q9UM47 2321 aa9.87□□□□□ -0.83
APOB-202ENST00000399256 A0A087WVE0 104 aa9.87□□□□□ -0.83
APOB-202ENST00000399256 NCR3O14931 201 aa9.87□□□□□ -0.83
APOB-202ENST00000399256 PFN2P35080 140 aa9.87□□□□□ -0.83
APOB-202ENST00000399256 NOP10Q9NPE3 64 aaKnown RBP9.87□□□□□ -0.83
APOB-202ENST00000399256 OVOL2Q9BRP0 275 aa9.87□□□□□ -0.83
APOB-202ENST00000399256 KRTAP1-3Q8IUG1 177 aa9.86□□□□□ -0.83
APOB-202ENST00000399256 OR13C6PQ8NH95 151 aa9.86□□□□□ -0.83
APOB-202ENST00000399256 A0A1B0GX51 115 aa9.85□□□□□ -0.83
APOB-202ENST00000399256 CRYGAP11844 174 aa9.85□□□□□ -0.83
APOB-202ENST00000399256 RPL18AQ02543 176 aaKnown RBP9.85□□□□□ -0.83
APOB-202ENST00000399256 PAX4O43316 350 aa9.85□□□□□ -0.83
APOB-202ENST00000399256 C4orf3Q8WVX3 66 aa9.85□□□□□ -0.83
APOB-202ENST00000399256 C11orf68Q9H3H3 251 aaKnown RBP9.85□□□□□ -0.83
APOB-202ENST00000399256 CR1P17927 2039 aa9.84□□□□□ -0.83
APOB-202ENST00000399256 MYO9AB2RTY4 2548 aa9.84□□□□□ -0.83
APOB-202ENST00000399256 J3KT08 172 aa9.84□□□□□ -0.83
APOB-202ENST00000399256 IGLV4-60A0A075B6I1 120 aa9.83□□□□□ -0.84
APOB-202ENST00000399256 H0YGX0 51 aa9.83□□□□□ -0.84
APOB-202ENST00000399256 Q6JHZ5 121 aa9.83□□□□□ -0.84
APOB-202ENST00000399256 J3QLI3 93 aa9.82□□□□□ -0.84
APOB-202ENST00000399256 TRGV2A0A075B6R0 118 aa9.82□□□□□ -0.84
APOB-202ENST00000399256 OBSCN-AS1Q96MR7 158 aa9.82□□□□□ -0.84
APOB-202ENST00000399256 UNC79Q9P2D8 2635 aa9.82□□□□□ -0.84
APOB-202ENST00000399256 PDZD2O15018 2839 aa9.82□□□□□ -0.84
APOB-202ENST00000399256 WNK1Q9H4A3 2382 aa9.82□□□□□ -0.84
APOB-202ENST00000399256 C11orf44Q8N8P7 122 aa9.82□□□□□ -0.84
APOB-202ENST00000399256 FAM19A5Q7Z5A7 132 aaPredicted RBP9.81□□□□□ -0.84
APOB-202ENST00000399256 FASNP49327 2511 aaKnown RBP9.81□□□□□ -0.84
APOB-202ENST00000399256 ZNF469Q96JG9 3925 aaPredicted RBP9.81□□□□□ -0.84
APOB-202ENST00000399256 A0A1W2PRX2 142 aa9.8□□□□□ -0.84
APOB-202ENST00000399256 LINC01561Q8N1V8 128 aa9.8□□□□□ -0.84
APOB-202ENST00000399256 IGHV4-31P0DP07 118 aa9.8□□□□□ -0.84
APOB-202ENST00000399256 IGHV3OR16-9A0A0B4J2B5 98 aa9.8□□□□□ -0.84
APOB-202ENST00000399256 ITPR2Q14571 2701 aa9.8□□□□□ -0.84
APOB-202ENST00000399256 IBA57-AS1B1ANH7 110 aa9.79□□□□□ -0.84
APOB-202ENST00000399256 KIR2DL5BQ8NHK3 375 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms