RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 IGHV4-31P0DP07 118 aa11.5□□□□□ -0.57
CHMP1A-201ENST00000397901 HRCT1Q6UXD1 115 aa11.5□□□□□ -0.57
CHMP1A-201ENST00000397901 CDKN2A-AS1Q9UH64 79 aa11.5□□□□□ -0.57
CHMP1A-201ENST00000397901 HIST2H2BDQ6DRA6 164 aa11.49□□□□□ -0.57
CHMP1A-201ENST00000397901 COPS9Q8WXC6 57 aa11.49□□□□□ -0.57
CHMP1A-201ENST00000397901 NBPF19A0A087WUL8 3843 aa11.48□□□□□ -0.57
CHMP1A-201ENST00000397901 Q6JHZ5 121 aa11.48□□□□□ -0.57
CHMP1A-201ENST00000397901 ABCA12Q86UK0 2595 aa11.48□□□□□ -0.57
CHMP1A-201ENST00000397901 CHD6Q8TD26 2715 aa11.48□□□□□ -0.57
CHMP1A-201ENST00000397901 MYO9AB2RTY4 2548 aa11.48□□□□□ -0.57
CHMP1A-201ENST00000397901 DEFB113Q30KQ7 82 aa11.47□□□□□ -0.57
CHMP1A-201ENST00000397901 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.47□□□□□ -0.57
CHMP1A-201ENST00000397901 A0A0U1RRA0 63 aa11.47□□□□□ -0.57
CHMP1A-201ENST00000397901 MALP21145 153 aa11.47□□□□□ -0.57
CHMP1A-201ENST00000397901 Q6YL49 198 aa11.47□□□□□ -0.57
CHMP1A-201ENST00000397901 DGAT2L7PQ6IED9 249 aa11.46□□□□□ -0.57
CHMP1A-201ENST00000397901 PRIMA1Q86XR5 153 aa11.46□□□□□ -0.57
CHMP1A-201ENST00000397901 Q8N2B8 174 aa11.46□□□□□ -0.57
CHMP1A-201ENST00000397901 DNAL4O96015 105 aa11.46□□□□□ -0.58
CHMP1A-201ENST00000397901 IGHV3-53P01767 116 aa11.46□□□□□ -0.58
CHMP1A-201ENST00000397901 COX6A2Q02221 97 aa11.46□□□□□ -0.58
CHMP1A-201ENST00000397901 KHDC1LQ5JSQ8 128 aa11.46□□□□□ -0.58
CHMP1A-201ENST00000397901 C11orf72Q8NBR9 251 aa11.46□□□□□ -0.58
CHMP1A-201ENST00000397901 ZNF625Q96I27 306 aaPredicted RBP11.46□□□□□ -0.58
CHMP1A-201ENST00000397901 CUBNO60494 3623 aa11.46□□□□□ -0.58
CHMP1A-201ENST00000397901 NAV2Q8IVL1 2488 aa11.46□□□□□ -0.58
CHMP1A-201ENST00000397901 ZNF469Q96JG9 3925 aaPredicted RBP11.46□□□□□ -0.58
CHMP1A-201ENST00000397901 TEX15Q9BXT5 2789 aa11.46□□□□□ -0.58
CHMP1A-201ENST00000397901 APCP25054 2843 aa11.45□□□□□ -0.58
CHMP1A-201ENST00000397901 A8MTW9 85 aa11.45□□□□□ -0.58
CHMP1A-201ENST00000397901 FAM218AQ96MZ4 157 aa11.45□□□□□ -0.58
CHMP1A-201ENST00000397901 MAP6D1Q9H9H5 199 aa11.45□□□□□ -0.58
CHMP1A-201ENST00000397901 IGKV3D-7A0A0C4DH55 119 aa11.44□□□□□ -0.58
CHMP1A-201ENST00000397901 IGHV3OR16-12A0A075B7B8 117 aa11.43□□□□□ -0.58
CHMP1A-201ENST00000397901 USP17L23D6RBM5 183 aa11.43□□□□□ -0.58
CHMP1A-201ENST00000397901 Q9H8V8 135 aa11.43□□□□□ -0.58
CHMP1A-201ENST00000397901 DYNLRB2Q8TF09 96 aa11.43□□□□□ -0.58
CHMP1A-201ENST00000397901 PIK3CD-AS1Q5SR53 167 aa11.42□□□□□ -0.58
CHMP1A-201ENST00000397901 XCL2Q9UBD3 114 aa11.42□□□□□ -0.58
CHMP1A-201ENST00000397901 NDUFC2-KCTD14E9PQ53 114 aa11.42□□□□□ -0.58
CHMP1A-201ENST00000397901 RS1O15537 224 aa11.42□□□□□ -0.58
CHMP1A-201ENST00000397901 INSP01308 110 aa11.42□□□□□ -0.58
CHMP1A-201ENST00000397901 KRTAP1-3Q8IUG1 177 aa11.42□□□□□ -0.58
CHMP1A-201ENST00000397901 AKAP9Q99996 3911 aa11.41□□□□□ -0.58
CHMP1A-201ENST00000397901 LINC01561Q8N1V8 128 aa11.41□□□□□ -0.58
CHMP1A-201ENST00000397901 Q96MF0 132 aa11.41□□□□□ -0.58
CHMP1A-201ENST00000397901 IGLV5-45A0A087WSX0 123 aa11.41□□□□□ -0.58
CHMP1A-201ENST00000397901 SOSTDC1Q6X4U4 206 aa11.41□□□□□ -0.58
CHMP1A-201ENST00000397901 Q9HAA7 133 aa11.41□□□□□ -0.58
CHMP1A-201ENST00000397901 NOTCH3Q9UM47 2321 aa11.4□□□□□ -0.58
CHMP1A-201ENST00000397901 A0A087WVE0 104 aa11.4□□□□□ -0.58
CHMP1A-201ENST00000397901 OVOL2Q9BRP0 275 aa11.4□□□□□ -0.58
CHMP1A-201ENST00000397901 C2CD3Q4AC94 2353 aa11.4□□□□□ -0.59
CHMP1A-201ENST00000397901 LINC00242Q5T6M2 205 aa11.4□□□□□ -0.59
CHMP1A-201ENST00000397901 NDUFC2O95298 119 aa11.39□□□□□ -0.59
CHMP1A-201ENST00000397901 HIST2H2BCQ6DN03 193 aa11.39□□□□□ -0.59
CHMP1A-201ENST00000397901 LINC00846Q9NV44 126 aa11.39□□□□□ -0.59
CHMP1A-201ENST00000397901 TRGV1A0A0A0MS02 117 aa11.38□□□□□ -0.59
CHMP1A-201ENST00000397901 TENM4Q6N022 2769 aa11.38□□□□□ -0.59
CHMP1A-201ENST00000397901 WNK1Q9H4A3 2382 aa11.38□□□□□ -0.59
CHMP1A-201ENST00000397901 RPL28P46779 137 aaKnown RBP11.37□□□□□ -0.59
CHMP1A-201ENST00000397901 C14orf132Q9NPU4 83 aa11.37□□□□□ -0.59
CHMP1A-201ENST00000397901 IGLV5-39A0A0G2JS06 123 aa11.37□□□□□ -0.59
CHMP1A-201ENST00000397901 DEFB114Q30KQ6 69 aa11.37□□□□□ -0.59
CHMP1A-201ENST00000397901 PF4P02776 101 aa11.36□□□□□ -0.59
CHMP1A-201ENST00000397901 FHL2Q14192 279 aa11.36□□□□□ -0.59
CHMP1A-201ENST00000397901 OBSCN-AS1Q96MR7 158 aa11.36□□□□□ -0.59
CHMP1A-201ENST00000397901 TLN2Q9Y4G6 2542 aa11.36□□□□□ -0.59
CHMP1A-201ENST00000397901 SMIM1B2RUZ4 78 aa11.36□□□□□ -0.59
CHMP1A-201ENST00000397901 TRAV13-2A0A0B4J235 113 aa11.35□□□□□ -0.59
CHMP1A-201ENST00000397901 C4orf3Q8WVX3 66 aa11.35□□□□□ -0.59
CHMP1A-201ENST00000397901 PRO0628Q9UI54 55 aa11.35□□□□□ -0.59
CHMP1A-201ENST00000397901 ITPR3Q14573 2671 aa11.34□□□□□ -0.59
CHMP1A-201ENST00000397901 ODF3L2Q3SX64 289 aa11.34□□□□□ -0.59
CHMP1A-201ENST00000397901 NTM-AS1Q6ZSK4 140 aa11.34□□□□□ -0.59
CHMP1A-201ENST00000397901 C1orf158Q8N1D5 194 aa11.34□□□□□ -0.59
CHMP1A-201ENST00000397901 PFN2P35080 140 aa11.33□□□□□ -0.6
CHMP1A-201ENST00000397901 C9orf129Q5T035 196 aaKnown RBP11.33□□□□□ -0.6
CHMP1A-201ENST00000397901 Q6ZTI0 123 aa11.33□□□□□ -0.6
CHMP1A-201ENST00000397901 STHQ8IWL8 128 aa11.33□□□□□ -0.6
CHMP1A-201ENST00000397901 RPL36AP83881 106 aaKnown RBP11.32□□□□□ -0.6
CHMP1A-201ENST00000397901 C11orf44Q8N8P7 122 aa11.32□□□□□ -0.6
CHMP1A-201ENST00000397901 RPL36ALQ969Q0 106 aaKnown RBP11.32□□□□□ -0.6
CHMP1A-201ENST00000397901 KMT2BQ9UMN6 2715 aaPredicted RBP11.32□□□□□ -0.6
CHMP1A-201ENST00000397901 K7EQD1 137 aa11.32□□□□□ -0.6
CHMP1A-201ENST00000397901 CRPP02741 224 aa11.31□□□□□ -0.6
CHMP1A-201ENST00000397901 TMEM243Q9BU79 118 aa11.31□□□□□ -0.6
CHMP1A-201ENST00000397901 GHRHP01286 108 aa11.3□□□□□ -0.6
CHMP1A-201ENST00000397901 JMJD1CQ15652 2540 aa11.3□□□□□ -0.6
CHMP1A-201ENST00000397901 A0A087WYN8 130 aa11.3□□□□□ -0.6
CHMP1A-201ENST00000397901 FAM236DA0A1B0GTK5 79 aa11.3□□□□□ -0.6
CHMP1A-201ENST00000397901 A0A1W2PRX2 142 aa11.3□□□□□ -0.6
CHMP1A-201ENST00000397901 EPM2AB3EWF7 344 aa11.3□□□□□ -0.6
CHMP1A-201ENST00000397901 FAM236CP0DP71 79 aa11.3□□□□□ -0.6
CHMP1A-201ENST00000397901 WFDC11Q8NEX6 87 aa11.3□□□□□ -0.6
CHMP1A-201ENST00000397901 SONP18583 2426 aaKnown RBP11.29□□□□□ -0.6
CHMP1A-201ENST00000397901 CDC42SE2Q9NRR3 84 aa11.29□□□□□ -0.6
CHMP1A-201ENST00000397901 H0YGX0 51 aa11.29□□□□□ -0.6
CHMP1A-201ENST00000397901 S100A7L2Q5SY68 101 aa11.29□□□□□ -0.6
CHMP1A-201ENST00000397901 IL17DQ8TAD2 202 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms