RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 LEPROTO15243 131 aa12.91□□□□□ -0.34
TSPAN4-204ENST00000397404 ANKRD39Q53RE8 183 aa12.91□□□□□ -0.34
TSPAN4-204ENST00000397404 SLC25A34Q6PIV7 304 aa12.91□□□□□ -0.34
TSPAN4-204ENST00000397404 CDKN2A-AS1Q9UH64 79 aa12.91□□□□□ -0.34
TSPAN4-204ENST00000397404 A0A087WZ39 114 aa12.9□□□□□ -0.34
TSPAN4-204ENST00000397404 IGHV3-30P01768 117 aa12.9□□□□□ -0.34
TSPAN4-204ENST00000397404 IGHV3-33P01772 117 aa12.9□□□□□ -0.34
TSPAN4-204ENST00000397404 IGHV3-30-3P0DP02 117 aa12.9□□□□□ -0.34
TSPAN4-204ENST00000397404 IGHV3-30-5P0DP03 117 aa12.9□□□□□ -0.34
TSPAN4-204ENST00000397404 NMUP48645 174 aa12.9□□□□□ -0.34
TSPAN4-204ENST00000397404 Q9H8V8 135 aa12.9□□□□□ -0.34
TSPAN4-204ENST00000397404 IGKV3OR2-268A0A0C4DH90 116 aa12.89□□□□□ -0.35
TSPAN4-204ENST00000397404 SFTA2Q6UW10 78 aa12.89□□□□□ -0.35
TSPAN4-204ENST00000397404 RMI2Q96E14 147 aa12.89□□□□□ -0.35
TSPAN4-204ENST00000397404 MIEN1Q9BRT3 115 aa12.89□□□□□ -0.35
TSPAN4-204ENST00000397404 CSMD3Q7Z407 3707 aa12.88□□□□□ -0.35
TSPAN4-204ENST00000397404 IBA57-AS1B1ANH7 110 aa12.88□□□□□ -0.35
TSPAN4-204ENST00000397404 BOD1L2Q8IYS8 172 aa12.88□□□□□ -0.35
TSPAN4-204ENST00000397404 CHCHD10Q8WYQ3 142 aaPredicted RBP12.88□□□□□ -0.35
TSPAN4-204ENST00000397404 UBE2WQ96B02 151 aa12.88□□□□□ -0.35
TSPAN4-204ENST00000397404 COX11Q9Y6N1 276 aa12.88□□□□□ -0.35
TSPAN4-204ENST00000397404 IGLV5-39A0A0G2JS06 123 aa12.87□□□□□ -0.35
TSPAN4-204ENST00000397404 C3orf84H3BNL1 204 aa12.87□□□□□ -0.35
TSPAN4-204ENST00000397404 COX6A2Q02221 97 aa12.87□□□□□ -0.35
TSPAN4-204ENST00000397404 ENHOQ6UWT2 76 aa12.87□□□□□ -0.35
TSPAN4-204ENST00000397404 J3QQQ9 107 aa12.86□□□□□ -0.35
TSPAN4-204ENST00000397404 LGALS3P17931 250 aaKnown RBP12.86□□□□□ -0.35
TSPAN4-204ENST00000397404 TTC32Q5I0X7 151 aa12.86□□□□□ -0.35
TSPAN4-204ENST00000397404 COX7A2LO14548 114 aa12.85□□□□□ -0.35
TSPAN4-204ENST00000397404 APOMO95445 188 aa12.85□□□□□ -0.35
TSPAN4-204ENST00000397404 XCL1P47992 114 aa12.85□□□□□ -0.35
TSPAN4-204ENST00000397404 C1orf43Q9BWL3 253 aa12.85□□□□□ -0.35
TSPAN4-204ENST00000397404 SMIM1B2RUZ4 78 aa12.85□□□□□ -0.35
TSPAN4-204ENST00000397404 CLPSL2Q6UWE3 100 aa12.85□□□□□ -0.35
TSPAN4-204ENST00000397404 Q8N3U1 123 aa12.85□□□□□ -0.35
TSPAN4-204ENST00000397404 C14orf144Q96I85 54 aa12.84□□□□□ -0.35
TSPAN4-204ENST00000397404 IGKV2D-26A0A0A0MRZ7 120 aa12.83□□□□□ -0.36
TSPAN4-204ENST00000397404 PRO1933Q9H354 126 aa12.83□□□□□ -0.36
TSPAN4-204ENST00000397404 MYMXA0A1B0GTQ4 84 aa12.82□□□□□ -0.36
TSPAN4-204ENST00000397404 SPINK8P0C7L1 97 aa12.82□□□□□ -0.36
TSPAN4-204ENST00000397404 MALP21145 153 aa12.81□□□□□ -0.36
TSPAN4-204ENST00000397404 DDTP30046 118 aa12.81□□□□□ -0.36
TSPAN4-204ENST00000397404 FOXI1Q12951 378 aa12.81□□□□□ -0.36
TSPAN4-204ENST00000397404 ZFAND6Q6FIF0 208 aa12.81□□□□□ -0.36
TSPAN4-204ENST00000397404 HIGD1BQ9P298 99 aa12.81□□□□□ -0.36
TSPAN4-204ENST00000397404 CXCL5P42830 114 aa12.8□□□□□ -0.36
TSPAN4-204ENST00000397404 PLECQ15149 4684 aaKnown RBP12.8□□□□□ -0.36
TSPAN4-204ENST00000397404 ZNF815PA8K554 130 aa12.79□□□□□ -0.36
TSPAN4-204ENST00000397404 PCP2Q8IVA1 136 aa12.79□□□□□ -0.36
TSPAN4-204ENST00000397404 TM2D2Q9BX73 214 aa12.79□□□□□ -0.36
TSPAN4-204ENST00000397404 IGLV10-54A0A075B6I4 117 aa12.78□□□□□ -0.36
TSPAN4-204ENST00000397404 GAGE12HA6NDE8 117 aa12.78□□□□□ -0.36
TSPAN4-204ENST00000397404 HNRNPA3P51991 378 aaKnown RBP12.78□□□□□ -0.36
TSPAN4-204ENST00000397404 HERV-K104P63124 156 aa12.78□□□□□ -0.36
TSPAN4-204ENST00000397404 Q8IZM0 81 aa12.78□□□□□ -0.36
TSPAN4-204ENST00000397404 TGP01266 2768 aa12.78□□□□□ -0.36
TSPAN4-204ENST00000397404 LINC00587B1AMM8 73 aa12.78□□□□□ -0.36
TSPAN4-204ENST00000397404 PRSS2P07478 247 aa12.78□□□□□ -0.36
TSPAN4-204ENST00000397404 CFAP161Q6P656 301 aa12.78□□□□□ -0.36
TSPAN4-204ENST00000397404 C5orf38Q86SI9 138 aa12.78□□□□□ -0.36
TSPAN4-204ENST00000397404 COX7B2Q8TF08 81 aa12.78□□□□□ -0.36
TSPAN4-204ENST00000397404 NDUFA12Q9UI09 145 aa12.78□□□□□ -0.36
TSPAN4-204ENST00000397404 IGHV3-64A0A075B6Q5 118 aa12.77□□□□□ -0.37
TSPAN4-204ENST00000397404 F8WDY8 70 aa12.77□□□□□ -0.37
TSPAN4-204ENST00000397404 NDUFA1O15239 70 aa12.77□□□□□ -0.37
TSPAN4-204ENST00000397404 STARD9Q9P2P6 4700 aa12.76□□□□□ -0.37
TSPAN4-204ENST00000397404 CASC10Q5T4H9 136 aa12.76□□□□□ -0.37
TSPAN4-204ENST00000397404 IGKV2D-24A0A075B6R9 120 aa12.75□□□□□ -0.37
TSPAN4-204ENST00000397404 SCGB1D4Q6XE38 83 aa12.75□□□□□ -0.37
TSPAN4-204ENST00000397404 GCSHP23434 173 aa12.74□□□□□ -0.37
TSPAN4-204ENST00000397404 KRTAP26-1Q6PEX3 210 aa12.74□□□□□ -0.37
TSPAN4-204ENST00000397404 NBDYA0A0U1RRE5 68 aa12.73□□□□□ -0.37
TSPAN4-204ENST00000397404 TSPEAR-AS2P59090 65 aa12.73□□□□□ -0.37
TSPAN4-204ENST00000397404 C6orf226Q5I0X4 101 aa12.73□□□□□ -0.37
TSPAN4-204ENST00000397404 TIMM17BO60830 172 aa12.72□□□□□ -0.37
TSPAN4-204ENST00000397404 CIRBPQ14011 172 aaKnown RBP12.72□□□□□ -0.37
TSPAN4-204ENST00000397404 TAL2Q16559 108 aa12.72□□□□□ -0.37
TSPAN4-204ENST00000397404 Q6ZVH6 145 aa12.72□□□□□ -0.37
TSPAN4-204ENST00000397404 ORAOV1Q8WV07 137 aa12.72□□□□□ -0.37
TSPAN4-204ENST00000397404 PCP4L1A6NKN8 68 aa12.72□□□□□ -0.37
TSPAN4-204ENST00000397404 TMEM238C9JI98 176 aa12.72□□□□□ -0.37
TSPAN4-204ENST00000397404 MAPKAPK5-AS1Q8N8E1 139 aa12.72□□□□□ -0.37
TSPAN4-204ENST00000397404 ZNF625Q96I27 306 aaPredicted RBP12.72□□□□□ -0.37
TSPAN4-204ENST00000397404 TENM2Q9NT68 2774 aa12.71□□□□□ -0.37
TSPAN4-204ENST00000397404 COPS9Q8WXC6 57 aa12.71□□□□□ -0.38
TSPAN4-204ENST00000397404 Q9HAA7 133 aa12.71□□□□□ -0.38
TSPAN4-204ENST00000397404 CKS1BP61024 79 aa12.7□□□□□ -0.38
TSPAN4-204ENST00000397404 C2orf91Q6ZV80 131 aa12.7□□□□□ -0.38
TSPAN4-204ENST00000397404 SPANXB1Q9NS25 103 aaPredicted RBP12.7□□□□□ -0.38
TSPAN4-204ENST00000397404 TOMM7Q9P0U1 55 aa12.7□□□□□ -0.38
TSPAN4-204ENST00000397404 LYSTQ99698 3801 aa12.69□□□□□ -0.38
TSPAN4-204ENST00000397404 TTTY13Q9BZ97 58 aa12.69□□□□□ -0.38
TSPAN4-204ENST00000397404 A0A0J9YXY3 114 aa12.68□□□□□ -0.38
TSPAN4-204ENST00000397404 M0R143 59 aa12.68□□□□□ -0.38
TSPAN4-204ENST00000397404 HSD52Q0P140 79 aa12.68□□□□□ -0.38
TSPAN4-204ENST00000397404 ZNF561-AS1K7EIQ3 104 aa12.67□□□□□ -0.38
TSPAN4-204ENST00000397404 SPAG11BQ08648 103 aa12.67□□□□□ -0.38
TSPAN4-204ENST00000397404 KIAA0087Q14695 138 aa12.67□□□□□ -0.38
TSPAN4-204ENST00000397404 C2orf48Q96LS8 159 aa12.67□□□□□ -0.38
TSPAN4-204ENST00000397404 GVQW2A0A096LPI5 108 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms