RNA–Protein interactions for RNA: ENST00000396081.5

HERPUD2-202, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 3,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-202ENST00000396081 OR13C6PQ8NH95 151 aa12.97□□□□□ -0.33
HERPUD2-202ENST00000396081 A0A087WVE0 104 aa12.97□□□□□ -0.33
HERPUD2-202ENST00000396081 CDC42SE2Q9NRR3 84 aa12.97□□□□□ -0.33
HERPUD2-202ENST00000396081 ACACBO00763 2458 aa12.97□□□□□ -0.33
HERPUD2-202ENST00000396081 ATOX1O00244 68 aa12.97□□□□□ -0.33
HERPUD2-202ENST00000396081 SMIM11BQ8TCY0 68 aa12.97□□□□□ -0.33
HERPUD2-202ENST00000396081 RPL28P46779 137 aaKnown RBP12.96□□□□□ -0.33
HERPUD2-202ENST00000396081 PFN2P35080 140 aa12.96□□□□□ -0.34
HERPUD2-202ENST00000396081 J3KT08 172 aa12.95□□□□□ -0.34
HERPUD2-202ENST00000396081 LECT2O14960 151 aa12.95□□□□□ -0.34
HERPUD2-202ENST00000396081 SLPIP03973 132 aa12.95□□□□□ -0.34
HERPUD2-202ENST00000396081 Q6ZTI0 123 aa12.95□□□□□ -0.34
HERPUD2-202ENST00000396081 IGKV2-28A0A075B6P5 120 aa12.94□□□□□ -0.34
HERPUD2-202ENST00000396081 IGKV2D-28P01615 120 aa12.94□□□□□ -0.34
HERPUD2-202ENST00000396081 C2orf48Q96LS8 159 aa12.94□□□□□ -0.34
HERPUD2-202ENST00000396081 FAM208BQ5VWN6 2430 aa12.94□□□□□ -0.34
HERPUD2-202ENST00000396081 NCR3O14931 201 aa12.94□□□□□ -0.34
HERPUD2-202ENST00000396081 K7EQD1 137 aa12.94□□□□□ -0.34
HERPUD2-202ENST00000396081 LINC00846Q9NV44 126 aa12.94□□□□□ -0.34
HERPUD2-202ENST00000396081 FAM19A5Q7Z5A7 132 aaPredicted RBP12.93□□□□□ -0.34
HERPUD2-202ENST00000396081 COX7B2Q8TF08 81 aa12.93□□□□□ -0.34
HERPUD2-202ENST00000396081 CYSTM1Q9H1C7 97 aa12.93□□□□□ -0.34
HERPUD2-202ENST00000396081 PAX4O43316 350 aa12.93□□□□□ -0.34
HERPUD2-202ENST00000396081 C11orf68Q9H3H3 251 aaKnown RBP12.93□□□□□ -0.34
HERPUD2-202ENST00000396081 SONP18583 2426 aaKnown RBP12.93□□□□□ -0.34
HERPUD2-202ENST00000396081 ITPR1Q14643 2758 aa12.92□□□□□ -0.34
HERPUD2-202ENST00000396081 PF4P02776 101 aa12.92□□□□□ -0.34
HERPUD2-202ENST00000396081 RPL18AQ02543 176 aaKnown RBP12.92□□□□□ -0.34
HERPUD2-202ENST00000396081 TMEM243Q9BU79 118 aa12.92□□□□□ -0.34
HERPUD2-202ENST00000396081 CHD6Q8TD26 2715 aa12.91□□□□□ -0.34
HERPUD2-202ENST00000396081 CACNA1AO00555 2505 aa12.9□□□□□ -0.34
HERPUD2-202ENST00000396081 A8MTW9 85 aa12.9□□□□□ -0.34
HERPUD2-202ENST00000396081 HIST1H4AP62805 103 aaKnown RBP12.9□□□□□ -0.34
HERPUD2-202ENST00000396081 CRYGAP11844 174 aa12.9□□□□□ -0.34
HERPUD2-202ENST00000396081 CCL18P55774 89 aa12.9□□□□□ -0.34
HERPUD2-202ENST00000396081 STHQ8IWL8 128 aa12.9□□□□□ -0.34
HERPUD2-202ENST00000396081 ZNF702PQ9H963 129 aa12.9□□□□□ -0.34
HERPUD2-202ENST00000396081 MXRA5Q9NR99 2828 aa12.9□□□□□ -0.35
HERPUD2-202ENST00000396081 ANKRD17O75179 2603 aaKnown RBP12.89□□□□□ -0.35
HERPUD2-202ENST00000396081 FLNCQ14315 2725 aa12.89□□□□□ -0.35
HERPUD2-202ENST00000396081 OVOL2Q9BRP0 275 aa12.89□□□□□ -0.35
HERPUD2-202ENST00000396081 LOC100131303A0A0U1RQF7 123 aa12.89□□□□□ -0.35
HERPUD2-202ENST00000396081 LRRC75A-AS1Q8N1F1 130 aa12.89□□□□□ -0.35
HERPUD2-202ENST00000396081 NOP10Q9NPE3 64 aaKnown RBP12.89□□□□□ -0.35
HERPUD2-202ENST00000396081 EPG5Q9HCE0 2579 aa12.88□□□□□ -0.35
HERPUD2-202ENST00000396081 C1orf158Q8N1D5 194 aa12.88□□□□□ -0.35
HERPUD2-202ENST00000396081 MYO18BQ8IUG5 2567 aa12.88□□□□□ -0.35
HERPUD2-202ENST00000396081 FN1P02751 2386 aaKnown RBP12.88□□□□□ -0.35
HERPUD2-202ENST00000396081 KIR2DL5BQ8NHK3 375 aa12.88□□□□□ -0.35
HERPUD2-202ENST00000396081 C5orf47Q569G3 176 aa12.87□□□□□ -0.35
HERPUD2-202ENST00000396081 FAM19A3Q7Z5A8 133 aa12.87□□□□□ -0.35
HERPUD2-202ENST00000396081 TRBV10-1A0A0K0K1A3 114 aa12.87□□□□□ -0.35
HERPUD2-202ENST00000396081 H0YGX0 51 aa12.87□□□□□ -0.35
HERPUD2-202ENST00000396081 TRGV2A0A075B6R0 118 aa12.86□□□□□ -0.35
HERPUD2-202ENST00000396081 SMIM9A6NGZ8 99 aa12.86□□□□□ -0.35
HERPUD2-202ENST00000396081 NAV2Q8IVL1 2488 aa12.86□□□□□ -0.35
HERPUD2-202ENST00000396081 C11orf44Q8N8P7 122 aa12.86□□□□□ -0.35
HERPUD2-202ENST00000396081 DEFB114Q30KQ6 69 aa12.85□□□□□ -0.35
HERPUD2-202ENST00000396081 USP17L23D6RBM5 183 aa12.85□□□□□ -0.35
HERPUD2-202ENST00000396081 Q6JHZ5 121 aa12.85□□□□□ -0.35
HERPUD2-202ENST00000396081 SERP2Q8N6R1 65 aa12.85□□□□□ -0.35
HERPUD2-202ENST00000396081 LRRK2Q5S007 2527 aa12.84□□□□□ -0.35
HERPUD2-202ENST00000396081 UTP20O75691 2785 aaKnown RBP12.84□□□□□ -0.35
HERPUD2-202ENST00000396081 LINC01356Q8N9X3 169 aa12.84□□□□□ -0.35
HERPUD2-202ENST00000396081 DSCR8Q96T75 97 aa12.84□□□□□ -0.35
HERPUD2-202ENST00000396081 ODF3L2Q3SX64 289 aa12.84□□□□□ -0.35
HERPUD2-202ENST00000396081 DOPEY1Q5JWR5 2465 aa12.83□□□□□ -0.36
HERPUD2-202ENST00000396081 RNASE1P07998 156 aaKnown RBP12.83□□□□□ -0.36
HERPUD2-202ENST00000396081 LINC01561Q8N1V8 128 aa12.83□□□□□ -0.36
HERPUD2-202ENST00000396081 WFDC9Q8NEX5 89 aa12.83□□□□□ -0.36
HERPUD2-202ENST00000396081 IGLV4-60A0A075B6I1 120 aa12.82□□□□□ -0.36
HERPUD2-202ENST00000396081 FBN2P35556 2912 aa12.82□□□□□ -0.36
HERPUD2-202ENST00000396081 A0A1W2PRX2 142 aa12.82□□□□□ -0.36
HERPUD2-202ENST00000396081 ORMDL1Q9P0S3 153 aa12.81□□□□□ -0.36
HERPUD2-202ENST00000396081 HILS1P60008 231 aa12.8□□□□□ -0.36
HERPUD2-202ENST00000396081 C6orf226Q5I0X4 101 aa12.8□□□□□ -0.36
HERPUD2-202ENST00000396081 ABCA12Q86UK0 2595 aa12.8□□□□□ -0.36
HERPUD2-202ENST00000396081 TRGV4A0A0C4DH28 118 aa12.8□□□□□ -0.36
HERPUD2-202ENST00000396081 PLA2G2AP14555 144 aa12.78□□□□□ -0.36
HERPUD2-202ENST00000396081 Q6YL49 198 aa12.78□□□□□ -0.36
HERPUD2-202ENST00000396081 PKD1L2Q7Z442 2459 aa12.78□□□□□ -0.36
HERPUD2-202ENST00000396081 IBA57-AS1B1ANH7 110 aa12.77□□□□□ -0.36
HERPUD2-202ENST00000396081 DPH3Q96FX2 82 aa12.77□□□□□ -0.36
HERPUD2-202ENST00000396081 TEX15Q9BXT5 2789 aa12.77□□□□□ -0.36
HERPUD2-202ENST00000396081 CCDC168Q8NDH2 2452 aa12.77□□□□□ -0.36
HERPUD2-202ENST00000396081 TRAV23DV6A0A075B6W5 121 aa12.77□□□□□ -0.37
HERPUD2-202ENST00000396081 PRR3P79522 188 aaKnown RBP12.77□□□□□ -0.37
HERPUD2-202ENST00000396081 TMEM258P61165 79 aa12.77□□□□□ -0.37
HERPUD2-202ENST00000396081 IGHV3OR16-9A0A0B4J2B5 98 aa12.76□□□□□ -0.37
HERPUD2-202ENST00000396081 OBSCN-AS1Q96MR7 158 aa12.76□□□□□ -0.37
HERPUD2-202ENST00000396081 CFAP46Q8IYW2 2715 aa12.76□□□□□ -0.37
HERPUD2-202ENST00000396081 ZFYVE26Q68DK2 2539 aa12.76□□□□□ -0.37
HERPUD2-202ENST00000396081 RPL35AP18077 110 aaKnown RBP12.75□□□□□ -0.37
HERPUD2-202ENST00000396081 XCL1P47992 114 aa12.75□□□□□ -0.37
HERPUD2-202ENST00000396081 RPS28P62857 69 aaKnown RBP12.75□□□□□ -0.37
HERPUD2-202ENST00000396081 IL17DQ8TAD2 202 aa12.75□□□□□ -0.37
HERPUD2-202ENST00000396081 C4orf3Q8WVX3 66 aa12.75□□□□□ -0.37
HERPUD2-202ENST00000396081 CLPSL2Q6UWE3 100 aa12.75□□□□□ -0.37
HERPUD2-202ENST00000396081 TRBV6-4A0A1B0GX49 114 aa12.74□□□□□ -0.37
HERPUD2-202ENST00000396081 GHRHP01286 108 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms