RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 LOC107984640A0A0U1RRK4 108 aa4.01□□□□□ -1.77
VPS13C-204ENST00000395898 C2CD3Q4AC94 2353 aa4.01□□□□□ -1.77
VPS13C-204ENST00000395898 Q8IZM0 81 aa4.01□□□□□ -1.77
VPS13C-204ENST00000395898 MRPL55Q7Z7F7 128 aaKnown RBP4.01□□□□□ -1.77
VPS13C-204ENST00000395898 WFDC10BQ8IUB3 73 aa4.01□□□□□ -1.77
VPS13C-204ENST00000395898 IGKV2-28A0A075B6P5 120 aa4.01□□□□□ -1.77
VPS13C-204ENST00000395898 IGKV2D-28P01615 120 aa4.01□□□□□ -1.77
VPS13C-204ENST00000395898 POLR2KP53803 58 aaKnown RBP4.01□□□□□ -1.77
VPS13C-204ENST00000395898 C20orf197Q8N268 126 aa4.01□□□□□ -1.77
VPS13C-204ENST00000395898 PROK1P58294 105 aa4.01□□□□□ -1.77
VPS13C-204ENST00000395898 C3orf22Q8N5N4 141 aa4.01□□□□□ -1.77
VPS13C-204ENST00000395898 LINC00959A0A1B0GUT2 108 aa4.01□□□□□ -1.77
VPS13C-204ENST00000395898 LRCOL1A6NCL2 159 aa4.01□□□□□ -1.77
VPS13C-204ENST00000395898 MAPKAPK5-AS1Q8N8E1 139 aa4.01□□□□□ -1.77
VPS13C-204ENST00000395898 FAM236DA0A1B0GTK5 79 aa4□□□□□ -1.77
VPS13C-204ENST00000395898 FAM236CP0DP71 79 aa4□□□□□ -1.77
VPS13C-204ENST00000395898 SMIM11BQ8TCY0 68 aa4□□□□□ -1.77
VPS13C-204ENST00000395898 A0A096LNI7 61 aa4□□□□□ -1.77
VPS13C-204ENST00000395898 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4□□□□□ -1.77
VPS13C-204ENST00000395898 NDUFC2-KCTD14E9PQ53 114 aa4□□□□□ -1.77
VPS13C-204ENST00000395898 LST1O00453 97 aa4□□□□□ -1.77
VPS13C-204ENST00000395898 CDC42SE2Q9NRR3 84 aa4□□□□□ -1.77
VPS13C-204ENST00000395898 CLUHP3Q96NS8 147 aa4□□□□□ -1.77
VPS13C-204ENST00000395898 SLPIP03973 132 aa4□□□□□ -1.77
VPS13C-204ENST00000395898 C3orf84H3BNL1 204 aa4□□□□□ -1.77
VPS13C-204ENST00000395898 NDUFA7O95182 113 aa4□□□□□ -1.77
VPS13C-204ENST00000395898 CHCHD7Q9BUK0 85 aa3.99□□□□□ -1.77
VPS13C-204ENST00000395898 C10orf25Q5T742 122 aa3.99□□□□□ -1.77
VPS13C-204ENST00000395898 C10orf99Q6UWK7 81 aa3.99□□□□□ -1.77
VPS13C-204ENST00000395898 FAM19A3Q7Z5A8 133 aa3.99□□□□□ -1.77
VPS13C-204ENST00000395898 NAV2Q8IVL1 2488 aa3.99□□□□□ -1.77
VPS13C-204ENST00000395898 BRI3O95415 125 aa3.99□□□□□ -1.77
VPS13C-204ENST00000395898 NUPR2A6NF83 97 aa3.99□□□□□ -1.77
VPS13C-204ENST00000395898 FN1P02751 2386 aaKnown RBP3.99□□□□□ -1.77
VPS13C-204ENST00000395898 MT-ATP8P03928 68 aa3.99□□□□□ -1.77
VPS13C-204ENST00000395898 C2orf91Q6ZV80 131 aa3.99□□□□□ -1.77
VPS13C-204ENST00000395898 PIEZO1Q92508 2521 aa3.99□□□□□ -1.77
VPS13C-204ENST00000395898 SERP2Q8N6R1 65 aa3.99□□□□□ -1.77
VPS13C-204ENST00000395898 MPLKIPQ8TAP9 179 aa3.99□□□□□ -1.77
VPS13C-204ENST00000395898 CSDC2Q9Y534 153 aaKnown RBP3.98□□□□□ -1.77
VPS13C-204ENST00000395898 SVIPQ8NHG7 77 aa3.98□□□□□ -1.77
VPS13C-204ENST00000395898 FAM240AA0A1B0GVK7 77 aa3.98□□□□□ -1.77
VPS13C-204ENST00000395898 PLA2G2AP14555 144 aa3.98□□□□□ -1.77
VPS13C-204ENST00000395898 UBE2D3P61077 147 aa3.98□□□□□ -1.77
VPS13C-204ENST00000395898 UBE2D2P62837 147 aa3.98□□□□□ -1.77
VPS13C-204ENST00000395898 Q6ZQY7 126 aa3.98□□□□□ -1.77
VPS13C-204ENST00000395898 F8WDY8 70 aa3.98□□□□□ -1.77
VPS13C-204ENST00000395898 ZNF580Q9UK33 172 aa3.98□□□□□ -1.77
VPS13C-204ENST00000395898 IGHV4-30-4P0DP06 118 aa3.98□□□□□ -1.77
VPS13C-204ENST00000395898 Q6ZS46 218 aa3.98□□□□□ -1.77
VPS13C-204ENST00000395898 SERP1Q9Y6X1 66 aa3.98□□□□□ -1.77
VPS13C-204ENST00000395898 IGIPA6NJ69 53 aa3.98□□□□□ -1.77
VPS13C-204ENST00000395898 ZNF73O43830 326 aaPredicted RBP3.98□□□□□ -1.77
VPS13C-204ENST00000395898 C18orf65Q6ZTR6 163 aa3.97□□□□□ -1.77
VPS13C-204ENST00000395898 CRIP2P52943 208 aaPredicted RBP3.97□□□□□ -1.77
VPS13C-204ENST00000395898 IGLV2-18A0A075B6J9 118 aa3.97□□□□□ -1.77
VPS13C-204ENST00000395898 SCXQ7RTU7 201 aa3.97□□□□□ -1.77
VPS13C-204ENST00000395898 A0A0J9YWU9 116 aa3.97□□□□□ -1.77
VPS13C-204ENST00000395898 LOC100131303A0A0U1RQF7 123 aa3.97□□□□□ -1.77
VPS13C-204ENST00000395898 SPTSSBQ8NFR3 76 aa3.97□□□□□ -1.77
VPS13C-204ENST00000395898 CYSRT1A8MQ03 144 aa3.97□□□□□ -1.77
VPS13C-204ENST00000395898 PRR9Q5T870 116 aa3.97□□□□□ -1.77
VPS13C-204ENST00000395898 WFDC10AQ9H1F0 79 aa3.97□□□□□ -1.77
VPS13C-204ENST00000395898 CEP350Q5VT06 3117 aa3.96□□□□□ -1.77
VPS13C-204ENST00000395898 IGLV1-51P01701 117 aa3.96□□□□□ -1.77
VPS13C-204ENST00000395898 MRPS12O15235 138 aaKnown RBP3.96□□□□□ -1.78
VPS13C-204ENST00000395898 COX8CQ7Z4L0 72 aa3.96□□□□□ -1.78
VPS13C-204ENST00000395898 Q8N9L7 120 aa3.96□□□□□ -1.78
VPS13C-204ENST00000395898 ANKRD17O75179 2603 aaKnown RBP3.96□□□□□ -1.78
VPS13C-204ENST00000395898 RPL28P46779 137 aaKnown RBP3.96□□□□□ -1.78
VPS13C-204ENST00000395898 RPL37AP8A6NKH3 93 aa3.96□□□□□ -1.78
VPS13C-204ENST00000395898 TLN1Q9Y490 2541 aaKnown RBP3.96□□□□□ -1.78
VPS13C-204ENST00000395898 C11orf21Q9P2W6 132 aa3.96□□□□□ -1.78
VPS13C-204ENST00000395898 DOPEY1Q5JWR5 2465 aa3.96□□□□□ -1.78
VPS13C-204ENST00000395898 C10orf142B7Z368 130 aa3.96□□□□□ -1.78
VPS13C-204ENST00000395898 LY6G6CO95867 125 aa3.96□□□□□ -1.78
VPS13C-204ENST00000395898 A8MZ25 164 aa3.96□□□□□ -1.78
VPS13C-204ENST00000395898 COX7CP15954 63 aa3.95□□□□□ -1.78
VPS13C-204ENST00000395898 NANOS2P60321 138 aaKnown RBP3.95□□□□□ -1.78
VPS13C-204ENST00000395898 EGFEM1PQ0D2K5 195 aa3.95□□□□□ -1.78
VPS13C-204ENST00000395898 C5orf42Q9H799 3197 aa3.95□□□□□ -1.78
VPS13C-204ENST00000395898 PLAC8L1A1L4L8 177 aa3.95□□□□□ -1.78
VPS13C-204ENST00000395898 C16orf95Q9H693 158 aa3.95□□□□□ -1.78
VPS13C-204ENST00000395898 REG3GQ6UW15 175 aa3.95□□□□□ -1.78
VPS13C-204ENST00000395898 SPINK6Q6UWN8 80 aa3.95□□□□□ -1.78
VPS13C-204ENST00000395898 A0A1B0GUV1 79 aa3.95□□□□□ -1.78
VPS13C-204ENST00000395898 Q6Q795 121 aa3.95□□□□□ -1.78
VPS13C-204ENST00000395898 POM121L12Q8N7R1 296 aa3.95□□□□□ -1.78
VPS13C-204ENST00000395898 IGF2RP11717 2491 aa3.95□□□□□ -1.78
VPS13C-204ENST00000395898 IGLV9-49A0A0B4J1Y8 123 aa3.95□□□□□ -1.78
VPS13C-204ENST00000395898 M0QXV9 152 aa3.94□□□□□ -1.78
VPS13C-204ENST00000395898 M0R2N4 97 aa3.94□□□□□ -1.78
VPS13C-204ENST00000395898 OXLD1Q5BKU9 147 aa3.94□□□□□ -1.78
VPS13C-204ENST00000395898 Q8N814 137 aa3.94□□□□□ -1.78
VPS13C-204ENST00000395898 TLN2Q9Y4G6 2542 aa3.94□□□□□ -1.78
VPS13C-204ENST00000395898 ABCA12Q86UK0 2595 aa3.94□□□□□ -1.78
VPS13C-204ENST00000395898 LINC00242Q5T6M2 205 aa3.94□□□□□ -1.78
VPS13C-204ENST00000395898 SMIM1B2RUZ4 78 aa3.94□□□□□ -1.78
VPS13C-204ENST00000395898 NTM-AS1Q6ZSK4 140 aa3.94□□□□□ -1.78
VPS13C-204ENST00000395898 PPDPFQ9H3Y8 114 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms