RNA–Protein interactions for RNA: ENST00000395453.2

SCAF11-203, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCAF11, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-203ENST00000395453 A0A1B0GXF2 115 aa8.45□□□□□ -1.06
SCAF11-203ENST00000395453 COX7A2LO14548 114 aa8.45□□□□□ -1.06
SCAF11-203ENST00000395453 TNFRSF6BO95407 300 aa8.45□□□□□ -1.06
SCAF11-203ENST00000395453 CKS2P33552 79 aa8.45□□□□□ -1.06
SCAF11-203ENST00000395453 RNASE13Q5GAN3 156 aaKnown RBP8.45□□□□□ -1.06
SCAF11-203ENST00000395453 FAM104AQ969W3 186 aa8.45□□□□□ -1.06
SCAF11-203ENST00000395453 TMEM18Q96B42 140 aa8.45□□□□□ -1.06
SCAF11-203ENST00000395453 IGLV4-69A0A075B6H9 119 aa8.44□□□□□ -1.06
SCAF11-203ENST00000395453 TCAPO15273 167 aa8.44□□□□□ -1.06
SCAF11-203ENST00000395453 PRR3P79522 188 aaKnown RBP8.44□□□□□ -1.06
SCAF11-203ENST00000395453 Q6ZUT4 128 aa8.44□□□□□ -1.06
SCAF11-203ENST00000395453 TRAV13-1A0A0B4J241 112 aa8.43□□□□□ -1.06
SCAF11-203ENST00000395453 F8W036 122 aa8.43□□□□□ -1.06
SCAF11-203ENST00000395453 S100A8P05109 93 aa8.43□□□□□ -1.06
SCAF11-203ENST00000395453 MALP21145 153 aa8.43□□□□□ -1.06
SCAF11-203ENST00000395453 HBBP68871 147 aa8.43□□□□□ -1.06
SCAF11-203ENST00000395453 D6R8Y8 96 aa8.42□□□□□ -1.06
SCAF11-203ENST00000395453 PTTG1IPP53801 180 aa8.42□□□□□ -1.06
SCAF11-203ENST00000395453 RPL39P62891 51 aaKnown RBP8.42□□□□□ -1.06
SCAF11-203ENST00000395453 MRPL54Q6P161 138 aaKnown RBP8.42□□□□□ -1.06
SCAF11-203ENST00000395453 C2orf48Q96LS8 159 aa8.42□□□□□ -1.06
SCAF11-203ENST00000395453 SMIM2Q9BVW6 85 aa8.42□□□□□ -1.06
SCAF11-203ENST00000395453 LOC107984640A0A0U1RRK4 108 aa8.41□□□□□ -1.06
SCAF11-203ENST00000395453 NPYP01303 97 aa8.41□□□□□ -1.06
SCAF11-203ENST00000395453 PPBPP02775 128 aa8.41□□□□□ -1.06
SCAF11-203ENST00000395453 MRPS36P82909 103 aaKnown RBP8.41□□□□□ -1.06
SCAF11-203ENST00000395453 C5orf38Q86SI9 138 aa8.41□□□□□ -1.06
SCAF11-203ENST00000395453 LINC01600Q96MT4 127 aa8.4□□□□□ -1.06
SCAF11-203ENST00000395453 SPANXA1Q9NS26 97 aa8.4□□□□□ -1.06
SCAF11-203ENST00000395453 IGHV3OR16-9A0A0B4J2B5 98 aa8.39□□□□□ -1.07
SCAF11-203ENST00000395453 APOMO95445 188 aa8.39□□□□□ -1.07
SCAF11-203ENST00000395453 SRSF9Q13242 221 aaKnown RBP eCLIP8.39□□□□□ -1.07
SCAF11-203ENST00000395453 ATP5L2Q7Z4Y8 100 aa8.39□□□□□ -1.07
SCAF11-203ENST00000395453 CAMK2N2Q96S95 79 aa8.39□□□□□ -1.07
SCAF11-203ENST00000395453 OPRPNQ99935 248 aaPredicted RBP8.39□□□□□ -1.07
SCAF11-203ENST00000395453 A0A1W2PNN7 141 aa8.38□□□□□ -1.07
SCAF11-203ENST00000395453 PRSS47A8MTI9 375 aa8.38□□□□□ -1.07
SCAF11-203ENST00000395453 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.38□□□□□ -1.07
SCAF11-203ENST00000395453 GAGE2BQ13066 116 aa8.38□□□□□ -1.07
SCAF11-203ENST00000395453 RNF151Q2KHN1 245 aa8.38□□□□□ -1.07
SCAF11-203ENST00000395453 OR10D4PQ8NGN7 298 aa8.38□□□□□ -1.07
SCAF11-203ENST00000395453 F8WDY8 70 aa8.37□□□□□ -1.07
SCAF11-203ENST00000395453 SPINK6Q6UWN8 80 aa8.37□□□□□ -1.07
SCAF11-203ENST00000395453 Q6ZRP5 223 aa8.37□□□□□ -1.07
SCAF11-203ENST00000395453 TMEM136Q6ZRR5 245 aa8.37□□□□□ -1.07
SCAF11-203ENST00000395453 ORMDL3Q8N138 153 aa8.37□□□□□ -1.07
SCAF11-203ENST00000395453 SPAG11BQ08648 103 aa8.36□□□□□ -1.07
SCAF11-203ENST00000395453 PRELID3AQ96N28 172 aa8.36□□□□□ -1.07
SCAF11-203ENST00000395453 PYGO1Q9Y3Y4 419 aa8.36□□□□□ -1.07
SCAF11-203ENST00000395453 ODF1Q14990 250 aa8.35□□□□□ -1.07
SCAF11-203ENST00000395453 MRPL35Q9NZE8 188 aaKnown RBP8.35□□□□□ -1.07
SCAF11-203ENST00000395453 A0A0J9YXV3 536 aa8.34□□□□□ -1.07
SCAF11-203ENST00000395453 IFITM10A6NMD0 228 aa8.34□□□□□ -1.07
SCAF11-203ENST00000395453 RAB5AP20339 215 aa8.34□□□□□ -1.07
SCAF11-203ENST00000395453 KRTAP10-8P60410 259 aa8.34□□□□□ -1.07
SCAF11-203ENST00000395453 PNRC1Q12796 327 aaPredicted RBP8.34□□□□□ -1.07
SCAF11-203ENST00000395453 C9orf116Q5BN46 136 aaPredicted RBP8.34□□□□□ -1.07
SCAF11-203ENST00000395453 ORAOV1Q8WV07 137 aa8.34□□□□□ -1.07
SCAF11-203ENST00000395453 LAMTOR2Q9Y2Q5 125 aa8.34□□□□□ -1.07
SCAF11-203ENST00000395453 ANAPC16Q96DE5 110 aa8.33□□□□□ -1.08
SCAF11-203ENST00000395453 IGLV4-3A0A075B6K6 122 aa8.32□□□□□ -1.08
SCAF11-203ENST00000395453 A0A087WZ39 114 aa8.32□□□□□ -1.08
SCAF11-203ENST00000395453 KRTAP9-7A8MTY7 169 aa8.32□□□□□ -1.08
SCAF11-203ENST00000395453 TLX1NBP0CAT3 122 aa8.32□□□□□ -1.08
SCAF11-203ENST00000395453 IFI27P40305 119 aaPredicted RBP8.32□□□□□ -1.08
SCAF11-203ENST00000395453 RPL18AQ02543 176 aaKnown RBP8.32□□□□□ -1.08
SCAF11-203ENST00000395453 KIAA0087Q14695 138 aa8.32□□□□□ -1.08
SCAF11-203ENST00000395453 C10orf25Q5T742 122 aa8.32□□□□□ -1.08
SCAF11-203ENST00000395453 REG3GQ6UW15 175 aa8.32□□□□□ -1.08
SCAF11-203ENST00000395453 IMMP2LQ96T52 175 aa8.32□□□□□ -1.08
SCAF11-203ENST00000395453 NDUFA1O15239 70 aa8.31□□□□□ -1.08
SCAF11-203ENST00000395453 MT-ND4LP03901 98 aa8.31□□□□□ -1.08
SCAF11-203ENST00000395453 LINC00242Q5T6M2 205 aa8.31□□□□□ -1.08
SCAF11-203ENST00000395453 UNQ6190/PRO20217Q6UXQ8 127 aa8.31□□□□□ -1.08
SCAF11-203ENST00000395453 PSORS1C2Q9UIG4 136 aa8.31□□□□□ -1.08
SCAF11-203ENST00000395453 TGIF2-C20orf24A0A0A6YYL0 155 aa8.3□□□□□ -1.08
SCAF11-203ENST00000395453 Q8N8P6 123 aa8.3□□□□□ -1.08
SCAF11-203ENST00000395453 TMEM141Q96I45 108 aa8.3□□□□□ -1.08
SCAF11-203ENST00000395453 MAP1LC3AQ9H492 121 aa8.3□□□□□ -1.08
SCAF11-203ENST00000395453 LOC389332A0A1B0GUA5 103 aa8.29□□□□□ -1.08
SCAF11-203ENST00000395453 PHF5AQ7RTV0 110 aaKnown RBP8.29□□□□□ -1.08
SCAF11-203ENST00000395453 C6orf48Q9UBA6 75 aa8.29□□□□□ -1.08
SCAF11-203ENST00000395453 UBE2D1P51668 147 aa8.29□□□□□ -1.08
SCAF11-203ENST00000395453 RAB14P61106 215 aa8.29□□□□□ -1.08
SCAF11-203ENST00000395453 LINC00173Q6ZV60 143 aa8.29□□□□□ -1.08
SCAF11-203ENST00000395453 LINC01561Q8N1V8 128 aa8.29□□□□□ -1.08
SCAF11-203ENST00000395453 AMELXQ99217 191 aa8.29□□□□□ -1.08
SCAF11-203ENST00000395453 K7EMI3 77 aa8.28□□□□□ -1.08
SCAF11-203ENST00000395453 MT-ND6P03923 174 aa8.28□□□□□ -1.08
SCAF11-203ENST00000395453 NPSP0C0P6 89 aa8.28□□□□□ -1.08
SCAF11-203ENST00000395453 C2orf66Q6UXQ4 117 aa8.28□□□□□ -1.08
SCAF11-203ENST00000395453 TEX43Q6ZNM6 134 aa8.28□□□□□ -1.08
SCAF11-203ENST00000395453 CYSLTR1Q9Y271 337 aa8.28□□□□□ -1.08
SCAF11-203ENST00000395453 FAM168BA1KXE4 195 aa8.27□□□□□ -1.09
SCAF11-203ENST00000395453 IGIPA6NJ69 53 aa8.27□□□□□ -1.09
SCAF11-203ENST00000395453 ORMDL2Q53FV1 153 aa8.27□□□□□ -1.09
SCAF11-203ENST00000395453 FAM19A3Q7Z5A8 133 aa8.27□□□□□ -1.09
SCAF11-203ENST00000395453 TRBV30A0A0K0K1B3 111 aa8.26□□□□□ -1.09
SCAF11-203ENST00000395453 CLLU1Q5K131 121 aa8.26□□□□□ -1.09
SCAF11-203ENST00000395453 LCE5AQ5TCM9 118 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms