RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.55□□□□□ -0.88
SNCA-205ENST00000394991 TNFRSF6BO95407 300 aa9.55□□□□□ -0.88
SNCA-205ENST00000394991 IGLV7-43P04211 117 aa9.55□□□□□ -0.88
SNCA-205ENST00000394991 PRR4Q16378 134 aa9.55□□□□□ -0.88
SNCA-205ENST00000394991 CD164L2Q6UWJ8 174 aa9.55□□□□□ -0.88
SNCA-205ENST00000394991 DIRC1Q969H9 104 aa9.55□□□□□ -0.88
SNCA-205ENST00000394991 C20orf78Q9BR46 151 aa9.55□□□□□ -0.88
SNCA-205ENST00000394991 FAT4Q6V0I7 4981 aa9.55□□□□□ -0.88
SNCA-205ENST00000394991 TMEM218A2RU14 115 aa9.54□□□□□ -0.88
SNCA-205ENST00000394991 ADCYAP1P18509 176 aa9.54□□□□□ -0.88
SNCA-205ENST00000394991 SS18Q15532 418 aa9.54□□□□□ -0.88
SNCA-205ENST00000394991 COMMD7Q86VX2 200 aa9.54□□□□□ -0.88
SNCA-205ENST00000394991 KRTAP11-1Q8IUC1 163 aa9.54□□□□□ -0.88
SNCA-205ENST00000394991 TRBV24-1A0A075B6N3 115 aa9.53□□□□□ -0.88
SNCA-205ENST00000394991 H0Y9J4 135 aa9.53□□□□□ -0.88
SNCA-205ENST00000394991 APOMO95445 188 aa9.53□□□□□ -0.88
SNCA-205ENST00000394991 NPYP01303 97 aa9.53□□□□□ -0.88
SNCA-205ENST00000394991 KRTAP1-4P0C5Y4 121 aa9.53□□□□□ -0.88
SNCA-205ENST00000394991 SMCPP49901 116 aaPredicted RBP9.53□□□□□ -0.88
SNCA-205ENST00000394991 PPBPP02775 128 aa9.52□□□□□ -0.89
SNCA-205ENST00000394991 RPL18AQ02543 176 aaKnown RBP9.52□□□□□ -0.89
SNCA-205ENST00000394991 TMEM136Q6ZRR5 245 aa9.52□□□□□ -0.89
SNCA-205ENST00000394991 MRPL52Q86TS9 123 aaKnown RBP9.52□□□□□ -0.89
SNCA-205ENST00000394991 CAMK2N2Q96S95 79 aa9.52□□□□□ -0.89
SNCA-205ENST00000394991 CDC42SE2Q9NRR3 84 aa9.52□□□□□ -0.89
SNCA-205ENST00000394991 IGLV1-50A0A075B6I6 118 aa9.51□□□□□ -0.89
SNCA-205ENST00000394991 SMAGPQ0VAQ4 97 aa9.51□□□□□ -0.89
SNCA-205ENST00000394991 ORMDL3Q8N138 153 aa9.51□□□□□ -0.89
SNCA-205ENST00000394991 PRELID3AQ96N28 172 aa9.51□□□□□ -0.89
SNCA-205ENST00000394991 SMIM2Q9BVW6 85 aa9.51□□□□□ -0.89
SNCA-205ENST00000394991 RPL32P62910 135 aaKnown RBP9.5□□□□□ -0.89
SNCA-205ENST00000394991 TMEM18Q96B42 140 aa9.5□□□□□ -0.89
SNCA-205ENST00000394991 TCAPO15273 167 aa9.49□□□□□ -0.89
SNCA-205ENST00000394991 OPRPNQ99935 248 aaPredicted RBP9.49□□□□□ -0.89
SNCA-205ENST00000394991 SEC11CQ9BY50 192 aa9.49□□□□□ -0.89
SNCA-205ENST00000394991 UBE2D4Q9Y2X8 147 aa9.49□□□□□ -0.89
SNCA-205ENST00000394991 COX7A2LO14548 114 aa9.48□□□□□ -0.89
SNCA-205ENST00000394991 MALP21145 153 aa9.48□□□□□ -0.89
SNCA-205ENST00000394991 RNASE13Q5GAN3 156 aaKnown RBP9.48□□□□□ -0.89
SNCA-205ENST00000394991 C2orf48Q96LS8 159 aa9.48□□□□□ -0.89
SNCA-205ENST00000394991 CTDSP1Q9GZU7 261 aa9.48□□□□□ -0.89
SNCA-205ENST00000394991 A0A087WZ39 114 aa9.47□□□□□ -0.89
SNCA-205ENST00000394991 LOC389332A0A1B0GUA5 103 aa9.47□□□□□ -0.89
SNCA-205ENST00000394991 FAM168BA1KXE4 195 aa9.47□□□□□ -0.89
SNCA-205ENST00000394991 RAB5AP20339 215 aa9.47□□□□□ -0.89
SNCA-205ENST00000394991 RPL39P62891 51 aaKnown RBP9.47□□□□□ -0.89
SNCA-205ENST00000394991 IMMP2LQ96T52 175 aa9.47□□□□□ -0.89
SNCA-205ENST00000394991 CSDC2Q9Y534 153 aaKnown RBP9.46□□□□□ -0.9
SNCA-205ENST00000394991 TRAV13-1A0A0B4J241 112 aa9.45□□□□□ -0.9
SNCA-205ENST00000394991 Q6ZUT4 128 aa9.45□□□□□ -0.9
SNCA-205ENST00000394991 C5orf38Q86SI9 138 aa9.45□□□□□ -0.9
SNCA-205ENST00000394991 TIMM21Q9BVV7 248 aa9.45□□□□□ -0.9
SNCA-205ENST00000394991 MAP1LC3AQ9H492 121 aa9.45□□□□□ -0.9
SNCA-205ENST00000394991 C1orf196B1AJZ1 125 aa9.44□□□□□ -0.9
SNCA-205ENST00000394991 S100PP25815 95 aa9.44□□□□□ -0.9
SNCA-205ENST00000394991 UBE2D1P51668 147 aa9.44□□□□□ -0.9
SNCA-205ENST00000394991 SPAG11BQ08648 103 aa9.44□□□□□ -0.9
SNCA-205ENST00000394991 RNF151Q2KHN1 245 aa9.44□□□□□ -0.9
SNCA-205ENST00000394991 LAMTOR2Q9Y2Q5 125 aa9.44□□□□□ -0.9
SNCA-205ENST00000394991 KRTAP7-1Q8IUC3 87 aa9.43□□□□□ -0.9
SNCA-205ENST00000394991 SPANXA1Q9NS26 97 aa9.43□□□□□ -0.9
SNCA-205ENST00000394991 TRAV9-1A0A075B6T8 112 aa9.42□□□□□ -0.9
SNCA-205ENST00000394991 RPL13AP40429 203 aaKnown RBP9.42□□□□□ -0.9
SNCA-205ENST00000394991 FAM19A5Q7Z5A7 132 aaPredicted RBP9.42□□□□□ -0.9
SNCA-205ENST00000394991 Q8N8P6 123 aa9.42□□□□□ -0.9
SNCA-205ENST00000394991 RPS10P5Q9NQ39 176 aa9.42□□□□□ -0.9
SNCA-205ENST00000394991 PRSS47A8MTI9 375 aa9.41□□□□□ -0.9
SNCA-205ENST00000394991 KIAA1644Q3SXP7 199 aa9.41□□□□□ -0.9
SNCA-205ENST00000394991 C10orf91Q5T1B1 145 aa9.41□□□□□ -0.9
SNCA-205ENST00000394991 MRPL35Q9NZE8 188 aaKnown RBP9.41□□□□□ -0.9
SNCA-205ENST00000394991 CARHSP1Q9Y2V2 147 aaKnown RBP9.41□□□□□ -0.9
SNCA-205ENST00000394991 IFI27P40305 119 aaPredicted RBP9.4□□□□□ -0.9
SNCA-205ENST00000394991 C10orf25Q5T742 122 aa9.4□□□□□ -0.9
SNCA-205ENST00000394991 IFITM10A6NMD0 228 aa9.39□□□□□ -0.91
SNCA-205ENST00000394991 MRPS36P82909 103 aaKnown RBP9.39□□□□□ -0.91
SNCA-205ENST00000394991 RHEBQ15382 184 aa9.39□□□□□ -0.91
SNCA-205ENST00000394991 FAM104AQ969W3 186 aa9.39□□□□□ -0.91
SNCA-205ENST00000394991 TSPAN13O95857 204 aa9.38□□□□□ -0.91
SNCA-205ENST00000394991 TLX1NBP0CAT3 122 aa9.38□□□□□ -0.91
SNCA-205ENST00000394991 OR10D4PQ8NGN7 298 aa9.38□□□□□ -0.91
SNCA-205ENST00000394991 M0QXV9 152 aa9.37□□□□□ -0.91
SNCA-205ENST00000394991 APOC3P02656 99 aa9.37□□□□□ -0.91
SNCA-205ENST00000394991 ORMDL2Q53FV1 153 aa9.37□□□□□ -0.91
SNCA-205ENST00000394991 ORAOV1Q8WV07 137 aa9.37□□□□□ -0.91
SNCA-205ENST00000394991 NXT2Q9NPJ8 142 aaKnown RBP9.37□□□□□ -0.91
SNCA-205ENST00000394991 C6orf48Q9UBA6 75 aa9.37□□□□□ -0.91
SNCA-205ENST00000394991 CYSLTR1Q9Y271 337 aa9.37□□□□□ -0.91
SNCA-205ENST00000394991 UBE2BP63146 152 aa9.36□□□□□ -0.91
SNCA-205ENST00000394991 NDUFA5Q16718 116 aa9.36□□□□□ -0.91
SNCA-205ENST00000394991 GAGE2EQ4V326 116 aa9.36□□□□□ -0.91
SNCA-205ENST00000394991 C2orf66Q6UXQ4 117 aa9.36□□□□□ -0.91
SNCA-205ENST00000394991 UNQ6190/PRO20217Q6UXQ8 127 aa9.36□□□□□ -0.91
SNCA-205ENST00000394991 GNB1LQ9BYB4 327 aa9.36□□□□□ -0.91
SNCA-205ENST00000394991 GAGE2DQ9UEU5 116 aa9.36□□□□□ -0.91
SNCA-205ENST00000394991 PYGO1Q9Y3Y4 419 aa9.36□□□□□ -0.91
SNCA-205ENST00000394991 MUC17Q685J3 4493 aa9.35□□□□□ -0.91
SNCA-205ENST00000394991 IGLV4-3A0A075B6K6 122 aa9.35□□□□□ -0.91
SNCA-205ENST00000394991 NDUFA1O15239 70 aa9.35□□□□□ -0.91
SNCA-205ENST00000394991 COX19Q49B96 90 aa9.35□□□□□ -0.91
SNCA-205ENST00000394991 TMEM141Q96I45 108 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms