RNA–Protein interactions for RNA: ENST00000394224.3

SIPA1-201, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-201ENST00000394224 MIR7-3HGQ8N6C7 128 aa12.03□□□□□ -0.48
SIPA1-201ENST00000394224 LINC01356Q8N9X3 169 aa12.03□□□□□ -0.48
SIPA1-201ENST00000394224 TEP1Q99973 2627 aaKnown RBP12.03□□□□□ -0.48
SIPA1-201ENST00000394224 PAX4O43316 350 aa12.03□□□□□ -0.48
SIPA1-201ENST00000394224 UNC79Q9P2D8 2635 aa12.03□□□□□ -0.48
SIPA1-201ENST00000394224 F8P00451 2351 aa12.02□□□□□ -0.48
SIPA1-201ENST00000394224 ZNF702PQ9H963 129 aa12.02□□□□□ -0.48
SIPA1-201ENST00000394224 KLK9Q2XQG4 91 aa12.02□□□□□ -0.49
SIPA1-201ENST00000394224 RPL36AP83881 106 aaKnown RBP12.01□□□□□ -0.49
SIPA1-201ENST00000394224 RPL36ALQ969Q0 106 aaKnown RBP12.01□□□□□ -0.49
SIPA1-201ENST00000394224 C14orf132Q9NPU4 83 aa12.01□□□□□ -0.49
SIPA1-201ENST00000394224 PRR3P79522 188 aaKnown RBP12.01□□□□□ -0.49
SIPA1-201ENST00000394224 NTM-AS1Q6ZSK4 140 aa12.01□□□□□ -0.49
SIPA1-201ENST00000394224 YAE1D1Q9NRH1 226 aa12.01□□□□□ -0.49
SIPA1-201ENST00000394224 DEFB4AO15263 64 aa12□□□□□ -0.49
SIPA1-201ENST00000394224 SDIM1Q6ZPB5 146 aa12□□□□□ -0.49
SIPA1-201ENST00000394224 SPANXA1Q9NS26 97 aa12□□□□□ -0.49
SIPA1-201ENST00000394224 TRGV4A0A0C4DH28 118 aa12□□□□□ -0.49
SIPA1-201ENST00000394224 Q96MF0 132 aa12□□□□□ -0.49
SIPA1-201ENST00000394224 C9orf129Q5T035 196 aaKnown RBP11.99□□□□□ -0.49
SIPA1-201ENST00000394224 HIVEP1P15822 2718 aa11.99□□□□□ -0.49
SIPA1-201ENST00000394224 IGLV10-54A0A075B6I4 117 aa11.99□□□□□ -0.49
SIPA1-201ENST00000394224 DNAL4O96015 105 aa11.99□□□□□ -0.49
SIPA1-201ENST00000394224 SMCR5Q8TEV8 140 aa11.99□□□□□ -0.49
SIPA1-201ENST00000394224 XCL1P47992 114 aa11.99□□□□□ -0.49
SIPA1-201ENST00000394224 SHISA2Q6UWI4 295 aa11.99□□□□□ -0.49
SIPA1-201ENST00000394224 EDA2RQ9HAV5 297 aa11.99□□□□□ -0.49
SIPA1-201ENST00000394224 SMIM1B2RUZ4 78 aa11.98□□□□□ -0.49
SIPA1-201ENST00000394224 PYGO1Q9Y3Y4 419 aa11.98□□□□□ -0.49
SIPA1-201ENST00000394224 HELZ2Q9BYK8 2649 aaKnown RBP11.98□□□□□ -0.49
SIPA1-201ENST00000394224 WFDC11Q8NEX6 87 aa11.98□□□□□ -0.49
SIPA1-201ENST00000394224 A0A087WVE0 104 aa11.97□□□□□ -0.49
SIPA1-201ENST00000394224 ODF3L2Q3SX64 289 aa11.97□□□□□ -0.49
SIPA1-201ENST00000394224 CRPP02741 224 aa11.96□□□□□ -0.49
SIPA1-201ENST00000394224 C11orf72Q8NBR9 251 aa11.96□□□□□ -0.49
SIPA1-201ENST00000394224 SPANXDQ9BXN6 97 aa11.96□□□□□ -0.49
SIPA1-201ENST00000394224 SPANXCQ9NY87 97 aa11.96□□□□□ -0.49
SIPA1-201ENST00000394224 TMEM89A2RUT3 159 aa11.96□□□□□ -0.5
SIPA1-201ENST00000394224 C1orf158Q8N1D5 194 aa11.96□□□□□ -0.5
SIPA1-201ENST00000394224 WFDC9Q8NEX5 89 aa11.96□□□□□ -0.5
SIPA1-201ENST00000394224 SND1-IT1Q9HBX3 110 aa11.96□□□□□ -0.5
SIPA1-201ENST00000394224 PEMTQ9UBM1 199 aa11.96□□□□□ -0.5
SIPA1-201ENST00000394224 NCR3O14931 201 aa11.96□□□□□ -0.5
SIPA1-201ENST00000394224 HERVK_113P63121 156 aa11.96□□□□□ -0.5
SIPA1-201ENST00000394224 DEFB114Q30KQ6 69 aa11.96□□□□□ -0.5
SIPA1-201ENST00000394224 IGLV4-60A0A075B6I1 120 aa11.95□□□□□ -0.5
SIPA1-201ENST00000394224 C9orf153Q5TBE3 101 aa11.95□□□□□ -0.5
SIPA1-201ENST00000394224 LINC00526Q96FQ7 95 aa11.95□□□□□ -0.5
SIPA1-201ENST00000394224 A0A087WYN8 130 aa11.95□□□□□ -0.5
SIPA1-201ENST00000394224 H3BT86 120 aa11.95□□□□□ -0.5
SIPA1-201ENST00000394224 NDUFA1O15239 70 aa11.95□□□□□ -0.5
SIPA1-201ENST00000394224 TIRAPP58753 221 aa11.95□□□□□ -0.5
SIPA1-201ENST00000394224 LECT2O14960 151 aa11.94□□□□□ -0.5
SIPA1-201ENST00000394224 HIST1H4AP62805 103 aaKnown RBP11.93□□□□□ -0.5
SIPA1-201ENST00000394224 COX7A2LO14548 114 aa11.93□□□□□ -0.5
SIPA1-201ENST00000394224 LOC107984640A0A0U1RRK4 108 aa11.93□□□□□ -0.5
SIPA1-201ENST00000394224 LINC00337Q8N6G1 96 aa11.93□□□□□ -0.5
SIPA1-201ENST00000394224 K7EQD1 137 aa11.92□□□□□ -0.5
SIPA1-201ENST00000394224 C6orf226Q5I0X4 101 aa11.92□□□□□ -0.5
SIPA1-201ENST00000394224 TMEM243Q9BU79 118 aa11.91□□□□□ -0.5
SIPA1-201ENST00000394224 BRI3O95415 125 aa11.9□□□□□ -0.5
SIPA1-201ENST00000394224 HTN3P15516 51 aa11.9□□□□□ -0.51
SIPA1-201ENST00000394224 Q6YL49 198 aa11.89□□□□□ -0.51
SIPA1-201ENST00000394224 Q8N3U1 123 aa11.89□□□□□ -0.51
SIPA1-201ENST00000394224 CDC42SE2Q9NRR3 84 aa11.89□□□□□ -0.51
SIPA1-201ENST00000394224 A8MTW9 85 aa11.88□□□□□ -0.51
SIPA1-201ENST00000394224 SMIM11BQ8TCY0 68 aa11.88□□□□□ -0.51
SIPA1-201ENST00000394224 CCL24O00175 119 aa11.87□□□□□ -0.51
SIPA1-201ENST00000394224 IGHV4-31P0DP07 118 aa11.87□□□□□ -0.51
SIPA1-201ENST00000394224 C9orf116Q5BN46 136 aaPredicted RBP11.87□□□□□ -0.51
SIPA1-201ENST00000394224 PPDPFQ9H3Y8 114 aa11.87□□□□□ -0.51
SIPA1-201ENST00000394224 COX7B2Q8TF08 81 aa11.87□□□□□ -0.51
SIPA1-201ENST00000394224 PRORYQ9H606 182 aa11.86□□□□□ -0.51
SIPA1-201ENST00000394224 CR1P17927 2039 aa11.86□□□□□ -0.51
SIPA1-201ENST00000394224 TENM1Q9UKZ4 2725 aa11.85□□□□□ -0.51
SIPA1-201ENST00000394224 hADV29S1A0JD25 119 aa11.85□□□□□ -0.51
SIPA1-201ENST00000394224 MALP21145 153 aa11.85□□□□□ -0.51
SIPA1-201ENST00000394224 CCL18P55774 89 aa11.84□□□□□ -0.51
SIPA1-201ENST00000394224 PKD1L1Q8TDX9 2849 aa11.84□□□□□ -0.51
SIPA1-201ENST00000394224 IGKV2-28A0A075B6P5 120 aa11.83□□□□□ -0.52
SIPA1-201ENST00000394224 IGKV2D-28P01615 120 aa11.83□□□□□ -0.52
SIPA1-201ENST00000394224 CFAP161Q6P656 301 aa11.82□□□□□ -0.52
SIPA1-201ENST00000394224 BAHCC1Q9P281 2608 aa11.81□□□□□ -0.52
SIPA1-201ENST00000394224 IGLV5-39A0A0G2JS06 123 aa11.81□□□□□ -0.52
SIPA1-201ENST00000394224 DNAJC30Q96LL9 226 aa11.81□□□□□ -0.52
SIPA1-201ENST00000394224 FLNBO75369 2602 aaKnown RBP11.81□□□□□ -0.52
SIPA1-201ENST00000394224 F5H768 121 aa11.8□□□□□ -0.52
SIPA1-201ENST00000394224 A0A1B0GX51 115 aa11.8□□□□□ -0.52
SIPA1-201ENST00000394224 HILS1P60008 231 aa11.79□□□□□ -0.52
SIPA1-201ENST00000394224 C4orf3Q8WVX3 66 aa11.79□□□□□ -0.52
SIPA1-201ENST00000394224 LINC00846Q9NV44 126 aa11.79□□□□□ -0.52
SIPA1-201ENST00000394224 NBEAL1Q6ZS30 2694 aa11.79□□□□□ -0.52
SIPA1-201ENST00000394224 CXCL5P42830 114 aa11.79□□□□□ -0.52
SIPA1-201ENST00000394224 GYPEP15421 78 aa11.79□□□□□ -0.52
SIPA1-201ENST00000394224 LINC00482Q8N8I6 264 aa11.78□□□□□ -0.52
SIPA1-201ENST00000394224 BBC3Q96PG8 261 aaPredicted RBP11.78□□□□□ -0.52
SIPA1-201ENST00000394224 CYSTM1Q9H1C7 97 aa11.78□□□□□ -0.52
SIPA1-201ENST00000394224 DNAJC9-AS1A6NH13 148 aa11.78□□□□□ -0.52
SIPA1-201ENST00000394224 TENM4Q6N022 2769 aa11.77□□□□□ -0.52
SIPA1-201ENST00000394224 NOTCH1P46531 2555 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 162.4 ms